BLASTX nr result

ID: Coptis24_contig00006646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006646
         (1334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282029.1| PREDICTED: uncharacterized protein LOC100261...   421   e-115
ref|XP_002308463.1| predicted protein [Populus trichocarpa] gi|2...   418   e-114
ref|XP_004143326.1| PREDICTED: uncharacterized protein LOC101214...   417   e-114
ref|XP_002530342.1| conserved hypothetical protein [Ricinus comm...   416   e-114
ref|NP_001242702.1| uncharacterized protein LOC100794571 [Glycin...   414   e-113

>ref|XP_002282029.1| PREDICTED: uncharacterized protein LOC100261394 [Vitis vinifera]
            gi|147792025|emb|CAN62037.1| hypothetical protein
            VITISV_021370 [Vitis vinifera]
            gi|297740143|emb|CBI30325.3| unnamed protein product
            [Vitis vinifera]
          Length = 315

 Score =  421 bits (1083), Expect = e-115
 Identities = 214/285 (75%), Positives = 235/285 (82%), Gaps = 5/285 (1%)
 Frame = +3

Query: 171  YGKPNLVSFSATNSQSRIVSCSATENSS----GDKSSSSFCIIEGPETVQDFVQMQMKEI 338
            +G P  +S     S+S+I+  S  + S     GD + S+FCIIEGPETVQDFVQMQ++EI
Sbjct: 31   HGNPKRLSLHRRISRSQIICASGKDFSDPLPDGDTNPSNFCIIEGPETVQDFVQMQVQEI 90

Query: 339  QDNIKSRRNKIFLLMEEVRRLRVQKRIKRTKVIDEISEE-ADEMPDIPSSIPFLPHVXXX 515
            QDNI SRRNKIFLLMEEVRRLRVQ+RIK  KV DE  EE A+EMPD+PSSIPFLPHV   
Sbjct: 91   QDNISSRRNKIFLLMEEVRRLRVQQRIKSVKVFDENGEEEANEMPDMPSSIPFLPHVTKR 150

Query: 516  XXXXXXXXSFSFISGIIVFGGLLAPVLELKLGIGGTSYEDFIRNMHLPMQLSQVDPIVAS 695
                    SFSFIS II+FGGLLAP LELKLG+GGTSYEDFIR+MHLPMQLSQVDPIVAS
Sbjct: 151  TLKQLYLTSFSFISAIIIFGGLLAPTLELKLGLGGTSYEDFIRSMHLPMQLSQVDPIVAS 210

Query: 696  FSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYLACARCSASGVCLSIEPISIACGS 875
            FSGGAVGVISALMLIE NNVEQ EKKRCKYC+G GYL CARCSASGVCLSIEPIS++  S
Sbjct: 211  FSGGAVGVISALMLIEANNVEQHEKKRCKYCNGKGYLPCARCSASGVCLSIEPISVSSAS 270

Query: 876  DRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEHDLRIDPFD 1010
            DRPL+AP T+RC NCSG GKVMCPTCLCTGMVMASEHD RIDPFD
Sbjct: 271  DRPLKAPATRRCPNCSGVGKVMCPTCLCTGMVMASEHDPRIDPFD 315


>ref|XP_002308463.1| predicted protein [Populus trichocarpa] gi|222854439|gb|EEE91986.1|
            predicted protein [Populus trichocarpa]
          Length = 248

 Score =  418 bits (1075), Expect = e-114
 Identities = 206/248 (83%), Positives = 222/248 (89%), Gaps = 1/248 (0%)
 Frame = +3

Query: 270  SSFCIIEGPETVQDFVQMQMKEIQDNIKSRRNKIFLLMEEVRRLRVQKRIKRTKVIDEIS 449
            S+FCIIEGPETVQDFVQMQM+EIQDNI+SRRNKIFLLMEEVRRLRVQ+RIK  KV+DE  
Sbjct: 1    SNFCIIEGPETVQDFVQMQMQEIQDNIRSRRNKIFLLMEEVRRLRVQQRIKNLKVVDESG 60

Query: 450  EE-ADEMPDIPSSIPFLPHVXXXXXXXXXXXSFSFISGIIVFGGLLAPVLELKLGIGGTS 626
            EE ADEMPD+PSSIPFLPHV           SFSFISGII+FGGL+AP LELKLG+GGTS
Sbjct: 61   EEDADEMPDMPSSIPFLPHVTPKTLRQLYLTSFSFISGIILFGGLIAPTLELKLGLGGTS 120

Query: 627  YEDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYL 806
            YEDFIR+MHLP+QLS VDPIVASF GGAVGVIS+LMLIEVNNVEQQEKKRCKYCHGTGYL
Sbjct: 121  YEDFIRSMHLPLQLSMVDPIVASFVGGAVGVISSLMLIEVNNVEQQEKKRCKYCHGTGYL 180

Query: 807  ACARCSASGVCLSIEPISIACGSDRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEH 986
            ACARCSASGVCLSI+PIS++  SDRPL+ P TQRC NCSGAGKVMCPTCLCTGMVMASEH
Sbjct: 181  ACARCSASGVCLSIDPISLSSASDRPLQVPATQRCPNCSGAGKVMCPTCLCTGMVMASEH 240

Query: 987  DLRIDPFD 1010
            D R DPFD
Sbjct: 241  DPRFDPFD 248


>ref|XP_004143326.1| PREDICTED: uncharacterized protein LOC101214251 [Cucumis sativus]
            gi|449508430|ref|XP_004163310.1| PREDICTED:
            uncharacterized LOC101214251 [Cucumis sativus]
          Length = 324

 Score =  417 bits (1071), Expect = e-114
 Identities = 207/260 (79%), Positives = 224/260 (86%), Gaps = 1/260 (0%)
 Frame = +3

Query: 234  SATENSSGDKSSSSFCIIEGPETVQDFVQMQMKEIQDNIKSRRNKIFLLMEEVRRLRVQK 413
            SA+  S  D +SS+FCIIEGPETVQDFVQMQ +EIQDNI+SRRNKIFLLMEEVRRLR+Q+
Sbjct: 65   SASVPSDSDNTSSNFCIIEGPETVQDFVQMQFQEIQDNIRSRRNKIFLLMEEVRRLRIQQ 124

Query: 414  RIKRTKVIDEIS-EEADEMPDIPSSIPFLPHVXXXXXXXXXXXSFSFISGIIVFGGLLAP 590
            R+K  K IDE   EEA+EMPDIPSSIPFLPHV           S S I GIIVFGGL+AP
Sbjct: 125  RLKNLKPIDENDIEEANEMPDIPSSIPFLPHVTPKTLKQQYLTSLSVIWGIIVFGGLIAP 184

Query: 591  VLELKLGIGGTSYEDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIEVNNVEQQEK 770
             LELKLG+GGTSYEDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIE NNVEQQEK
Sbjct: 185  TLELKLGLGGTSYEDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIEANNVEQQEK 244

Query: 771  KRCKYCHGTGYLACARCSASGVCLSIEPISIACGSDRPLRAPTTQRCINCSGAGKVMCPT 950
            KRCKYCHGTGYLACARCS+SGVCLS +PIS++  S RPLR P TQRC+NCSGAGKVMCPT
Sbjct: 245  KRCKYCHGTGYLACARCSSSGVCLSADPISLSASSSRPLRMPKTQRCLNCSGAGKVMCPT 304

Query: 951  CLCTGMVMASEHDLRIDPFD 1010
            CLCTGM+MASEHD R DPFD
Sbjct: 305  CLCTGMLMASEHDPRFDPFD 324


>ref|XP_002530342.1| conserved hypothetical protein [Ricinus communis]
            gi|223530146|gb|EEF32058.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 307

 Score =  416 bits (1068), Expect = e-114
 Identities = 217/294 (73%), Positives = 239/294 (81%), Gaps = 5/294 (1%)
 Frame = +3

Query: 144  ISNNNSHPFYGKPNLVSFSATNSQSRIVSCSATENSSGDKSSSSFCIIEGPETVQDFVQM 323
            I+NN S P   K  +  F    S   I S  +  ++     SS+FCIIEGPETVQDFVQM
Sbjct: 21   INNNKSKP---KQRISKFRLLCSSPPINSSDSVPSAD----SSNFCIIEGPETVQDFVQM 73

Query: 324  QMKEIQDNIKSRRNKIFLLMEEVRRLRVQKRIKR--TKVIDEIS---EEADEMPDIPSSI 488
            Q++EIQDNI+SRRNKIFLLMEEVRRLRVQ+RIKR   K+IDE     E+ DEMPDIPSSI
Sbjct: 74   QLQEIQDNIRSRRNKIFLLMEEVRRLRVQQRIKRKTVKIIDETGQKEEDTDEMPDIPSSI 133

Query: 489  PFLPHVXXXXXXXXXXXSFSFISGIIVFGGLLAPVLELKLGIGGTSYEDFIRNMHLPMQL 668
            PFLP V           S SFISGIIVFGGL+AP LELKLGIGGTSYEDFI ++HLP+QL
Sbjct: 134  PFLPRVTPKTLKQLYLTSLSFISGIIVFGGLIAPTLELKLGIGGTSYEDFICSLHLPLQL 193

Query: 669  SQVDPIVASFSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYLACARCSASGVCLSI 848
            SQVDPIVASFSGGAVGVISALMLIE NNVEQQEKKRCKYCHGTGYLACARCSASGVCLSI
Sbjct: 194  SQVDPIVASFSGGAVGVISALMLIEANNVEQQEKKRCKYCHGTGYLACARCSASGVCLSI 253

Query: 849  EPISIACGSDRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEHDLRIDPFD 1010
            +PIS++  SD+PLR PTTQRCINCSGAGKVMCPTCLCTGM+MASEHD RI+PFD
Sbjct: 254  DPISLSSISDQPLRVPTTQRCINCSGAGKVMCPTCLCTGMLMASEHDPRIEPFD 307


>ref|NP_001242702.1| uncharacterized protein LOC100794571 [Glycine max]
            gi|255640133|gb|ACU20357.1| unknown [Glycine max]
          Length = 312

 Score =  414 bits (1063), Expect = e-113
 Identities = 213/303 (70%), Positives = 242/303 (79%), Gaps = 13/303 (4%)
 Frame = +3

Query: 141  FISNNNS---HPFYGKPNLVSFSATNS------QSRIVSC--SATENSSGDKSSSSFCII 287
            F+S+ NS    PF G  N   F+ + +      Q R+  C  S+ +  S D + S+FCII
Sbjct: 10   FLSSKNSIFHAPFKGNNNTKQFTFSKAANLLPLQPRLNVCFSSSKDAGSSDNTPSNFCII 69

Query: 288  EGPETVQDFVQMQMKEIQDNIKSRRNKIFLLMEEVRRLRVQKRIKRTKVI--DEISEEAD 461
            EGPETV+DF+QMQ++EIQDNIKSRRNKIFLLMEEVRRLRVQ+R +R K +  +E  EE +
Sbjct: 70   EGPETVEDFMQMQLQEIQDNIKSRRNKIFLLMEEVRRLRVQQRTRRGKKVVNEEGEEEPN 129

Query: 462  EMPDIPSSIPFLPHVXXXXXXXXXXXSFSFISGIIVFGGLLAPVLELKLGIGGTSYEDFI 641
            EMPDIPSSIPF PHV           S SFIS IIVFGGL+AP LELKLG+GGTSYEDFI
Sbjct: 130  EMPDIPSSIPFHPHVTPKTLKKLYLTSISFISAIIVFGGLIAPTLELKLGLGGTSYEDFI 189

Query: 642  RNMHLPMQLSQVDPIVASFSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYLACARC 821
            R++HLP+QLSQVDPIVASFSGGAVGVIS LMLIE NNVEQQEKKRCKYCHGTGYLACARC
Sbjct: 190  RSLHLPLQLSQVDPIVASFSGGAVGVISVLMLIEANNVEQQEKKRCKYCHGTGYLACARC 249

Query: 822  SASGVCLSIEPISIACGSDRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEHDLRID 1001
            SASGVCL+I+PIS++  S RPL APTT RC NCSGAGKVMCPTCLCTGM+MASEHDLRID
Sbjct: 250  SASGVCLNIDPISVSTASARPLHAPTTTRCPNCSGAGKVMCPTCLCTGMMMASEHDLRID 309

Query: 1002 PFD 1010
            PFD
Sbjct: 310  PFD 312


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