BLASTX nr result

ID: Coptis24_contig00006637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006637
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28311.3| unnamed protein product [Vitis vinifera]              118   9e-25
ref|XP_002275103.1| PREDICTED: uncharacterized protein At2g27730...   118   9e-25
gb|AFK47834.1| unknown [Medicago truncatula]                          114   1e-23
ref|XP_002523820.1| conserved hypothetical protein [Ricinus comm...   107   2e-21
ref|NP_001236566.1| uncharacterized protein LOC100500340 [Glycin...   104   1e-20

>emb|CBI28311.3| unnamed protein product [Vitis vinifera]
          Length = 170

 Score =  118 bits (295), Expect = 9e-25
 Identities = 62/111 (55%), Positives = 73/111 (65%)
 Frame = +2

Query: 20  STRNAARHVSRRLMSSGGKVLGEEEKAAENVYXXXXXXXXXXXXARKGPKPEDQPTTSTS 199
           +TR AAR+VSRRL SS GKVLGEEEKAAEN+Y            ARKGPKPE++P TS+ 
Sbjct: 51  ATRIAARYVSRRL-SSSGKVLGEEEKAAENIYIKKAEQEKLEKLARKGPKPEEKPVTSSG 109

Query: 200 GSVADAKPXXXXXXXXXXXXDKYRNYGVLAGVVTALGALGWYLKATAKKPE 352
            +V DA P            DK+RNY VLAG    LG LGWYLK+++KKPE
Sbjct: 110 ETVTDANPSGPASSTAGVSTDKHRNYAVLAGTAAILGGLGWYLKSSSKKPE 160


>ref|XP_002275103.1| PREDICTED: uncharacterized protein At2g27730, mitochondrial isoform
           3 [Vitis vinifera] gi|225464932|ref|XP_002275077.1|
           PREDICTED: uncharacterized protein At2g27730,
           mitochondrial isoform 2 [Vitis vinifera]
           gi|225464934|ref|XP_002275041.1| PREDICTED:
           uncharacterized protein At2g27730, mitochondrial isoform
           1 [Vitis vinifera] gi|147785806|emb|CAN62125.1|
           hypothetical protein VITISV_037578 [Vitis vinifera]
          Length = 114

 Score =  118 bits (295), Expect = 9e-25
 Identities = 62/111 (55%), Positives = 73/111 (65%)
 Frame = +2

Query: 20  STRNAARHVSRRLMSSGGKVLGEEEKAAENVYXXXXXXXXXXXXARKGPKPEDQPTTSTS 199
           +TR AAR+VSRRL SS GKVLGEEEKAAEN+Y            ARKGPKPE++P TS+ 
Sbjct: 2   ATRIAARYVSRRL-SSSGKVLGEEEKAAENIYIKKAEQEKLEKLARKGPKPEEKPVTSSG 60

Query: 200 GSVADAKPXXXXXXXXXXXXDKYRNYGVLAGVVTALGALGWYLKATAKKPE 352
            +V DA P            DK+RNY VLAG    LG LGWYLK+++KKPE
Sbjct: 61  ETVTDANPSGPASSTAGVSTDKHRNYAVLAGTAAILGGLGWYLKSSSKKPE 111


>gb|AFK47834.1| unknown [Medicago truncatula]
          Length = 120

 Score =  114 bits (286), Expect = 1e-23
 Identities = 64/115 (55%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
 Frame = +2

Query: 20  STRNAARHVSRRLMSSG-GKVLGEEEKAAENVYXXXXXXXXXXXXARKGPKPEDQPTTST 196
           +TR AAR  SRRL SSG GKVLGEEEKA EN Y            ARKGP+PE  P   +
Sbjct: 2   ATRVAARFASRRLFSSGSGKVLGEEEKAVENAYFKKAEQEKLEKLARKGPQPEATPAAGS 61

Query: 197 SGSVADAKP---XXXXXXXXXXXXDKYRNYGVLAGVVTALGALGWYLKATAKKPE 352
            GSV DAKP               DKYRNYGV+AG +T   ALGWYLK TAKKPE
Sbjct: 62  GGSVTDAKPSASGHSDTSGPKVSSDKYRNYGVVAGTITIFAALGWYLKGTAKKPE 116


>ref|XP_002523820.1| conserved hypothetical protein [Ricinus communis]
           gi|223536908|gb|EEF38546.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 112

 Score =  107 bits (266), Expect = 2e-21
 Identities = 59/115 (51%), Positives = 68/115 (59%)
 Frame = +2

Query: 20  STRNAARHVSRRLMSSGGKVLGEEEKAAENVYXXXXXXXXXXXXARKGPKPEDQPTTSTS 199
           +TR A R VSRR  SSGGK+L EEEKAAEN+Y            ARKGPKPE++   +TS
Sbjct: 2   ATRMAVRFVSRRF-SSGGKILSEEEKAAENIYIKKIEQEKLEKLARKGPKPEEK---ATS 57

Query: 200 GSVADAKPXXXXXXXXXXXXDKYRNYGVLAGVVTALGALGWYLKATAKKPEPVTE 364
           G   D KP            DKYRNY V+AG VT  GALGWYL +  KK E V +
Sbjct: 58  GPATDVKPSASASSTSGASTDKYRNYAVVAGTVTVFGALGWYLNSRGKKTEEVQD 112


>ref|NP_001236566.1| uncharacterized protein LOC100500340 [Glycine max]
           gi|255630077|gb|ACU15392.1| unknown [Glycine max]
          Length = 115

 Score =  104 bits (259), Expect = 1e-20
 Identities = 62/115 (53%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
 Frame = +2

Query: 20  STRNAARHVSRRLMSSG-GKVLGEEEKAAENVYXXXXXXXXXXXXARKGPKPEDQPTTST 196
           + R AAR+ SRRL SSG GK+L EEEKAAEN Y            ARKGP+PE      +
Sbjct: 2   AARVAARYGSRRLFSSGSGKILSEEEKAAENAYFKKAEQEKLEKLARKGPQPE----AGS 57

Query: 197 SGSVADAKPXXXXXXXXXXXX---DKYRNYGVLAGVVTALGALGWYLKATAKKPE 352
            GSV DAKP               DKYRNY V+AG VT LGALGWYLK  AKKPE
Sbjct: 58  GGSVTDAKPSSSGHAGTTADRVSTDKYRNYAVVAGTVTILGALGWYLKGAAKKPE 112


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