BLASTX nr result

ID: Coptis24_contig00006631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006631
         (1523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27078.3| unnamed protein product [Vitis vinifera]              454   e-125
ref|XP_003631189.1| PREDICTED: uncharacterized protein LOC100259...   441   e-121
emb|CAN78724.1| hypothetical protein VITISV_020007 [Vitis vinifera]   434   e-119
ref|XP_002524393.1| conserved hypothetical protein [Ricinus comm...   426   e-116
ref|XP_002315964.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116

>emb|CBI27078.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score =  454 bits (1168), Expect = e-125
 Identities = 255/479 (53%), Positives = 326/479 (68%), Gaps = 7/479 (1%)
 Frame = +2

Query: 32   GVSAVILIAAIVYYSSFTRKGFKLKLNGPLN-VFQLFLKRADSVDXXXXXXXXXXXXXXX 208
            G S  IL++AI Y+S  +RKGF+L+ N P++ + ++F++                     
Sbjct: 97   GTSIAILLSAIAYFS-LSRKGFRLQFNKPMHSIHEIFVRTKTEAGQSNTVYSNASDVDTN 155

Query: 209  PDYTSEEKVEISASESV---KKPLKRVIITVAADSTXXXXXXXXXXXXXXXDDVKENALC 379
                  E       E V    K +K V+I VAADST               DDV  + LC
Sbjct: 156  IVEAGTESASNEIDEDVASASKKVKHVLIPVAADSTQQEALLVLKKLKIIEDDVSADELC 215

Query: 380  TRREYARWLVKANLVLERNPKHRI--SILPSESIVQAFDDVDTEDSDFQFIQALAEAGII 553
            T+REYARWLV+ANL+LER+P+HRI  S LPS SI+ AFDDV+ ED D+  IQALAEAGII
Sbjct: 216  TKREYARWLVRANLLLERDPRHRIFSSSLPSGSIISAFDDVNAEDRDYGSIQALAEAGII 275

Query: 554  LSKLSEENYGSDQDDLKAQERINFYPESFLSRLDLINWKAQLEYSSIQQIEE-ISTKGVG 730
             SKLS  N  S  D  K Q  + F P+ F+SR DLINWKAQLEY  +  I+E IS   V 
Sbjct: 276  PSKLSG-NSNSALDSSKVQGEVYFSPDRFISRQDLINWKAQLEYKFMPGIKEKISRTKVD 334

Query: 731  FMDVSMISPEASAEFFMDILAGDKSILRKVFGQSRRFQPRKPATKAQAAVALTSGRLAKA 910
            FMD+  IS +AS EFF+D+LAGD+SI+RKVFGQS+RFQP KP+TKAQ+AVALTSGR+ + 
Sbjct: 335  FMDMKEISSDASPEFFIDMLAGDRSIVRKVFGQSKRFQPNKPSTKAQSAVALTSGRMTEV 394

Query: 911  IHMELSRLDTENSLILAEMEEIRSELLLRGDIQRVWDEKLNAVKAYGQEVTNHFQAAISD 1090
            IH EL RL+ E     AE EEIRS+LL RGDIQ  W EK+   K  G EV   + AA+SD
Sbjct: 395  IHTELLRLEAEKLSREAEAEEIRSQLLNRGDIQSFWSEKIKDEKIRGFEVEKDYLAAVSD 454

Query: 1091 LEQEKTVRDINLKESLKERAAVDCQRKLLVGLKEEVNEMSERLSSERADYAAEQKNLEDM 1270
            LE+E+ V    L E+LKE+AA++CQ +LL  LK+EV+EMSERL+ ER  Y AEQ+NL+DM
Sbjct: 455  LEEERIVHVNCLTENLKEKAAMECQSQLLFRLKDEVDEMSERLACERTGYMAEQRNLQDM 514

Query: 1271 SIDIQAKQDGIIEAKSILEAEKEALRMLRSWIEDEARRSQARAQVLEKVGRRWRWSEEA 1447
              ++Q KQ+G+++ KSILEAEKEALR+LRSW+EDEAR++QARA+VLE+VGRRW+W  +A
Sbjct: 515  LNELQNKQEGVLDVKSILEAEKEALRILRSWVEDEARKNQARAKVLEEVGRRWKWDSDA 573


>ref|XP_003631189.1| PREDICTED: uncharacterized protein LOC100259365 [Vitis vinifera]
          Length = 547

 Score =  441 bits (1134), Expect = e-121
 Identities = 246/461 (53%), Positives = 314/461 (68%), Gaps = 7/461 (1%)
 Frame = +2

Query: 86   RKGFKLKLNGPLN-VFQLFLKRADSVDXXXXXXXXXXXXXXXPDYTSEEKVEISASESV- 259
            +KGF+L+ N P++ + ++F++                           E       E V 
Sbjct: 85   KKGFRLQFNKPMHSIHEIFVRTKTEAGQSNTVYSNASDVDTNIVEAGTESASNEIDEDVA 144

Query: 260  --KKPLKRVIITVAADSTXXXXXXXXXXXXXXXDDVKENALCTRREYARWLVKANLVLER 433
               K +K V+I VAADST               DDV  + LCT+REYARWLV+ANL+LER
Sbjct: 145  SASKKVKHVLIPVAADSTQQEALLVLKKLKIIEDDVSADELCTKREYARWLVRANLLLER 204

Query: 434  NPKHRI--SILPSESIVQAFDDVDTEDSDFQFIQALAEAGIILSKLSEENYGSDQDDLKA 607
            +P+HRI  S LPS SI+ AFDDV+ ED D+  IQALAEAGII SKLS  N  S  D  K 
Sbjct: 205  DPRHRIFSSSLPSGSIISAFDDVNAEDRDYGSIQALAEAGIIPSKLSG-NSNSALDSSKV 263

Query: 608  QERINFYPESFLSRLDLINWKAQLEYSSIQQIEE-ISTKGVGFMDVSMISPEASAEFFMD 784
            Q  + F P+ F+SR DLINWKAQLEY  +  I+E IS   V FMD+  IS +AS EFF+D
Sbjct: 264  QGEVYFSPDRFISRQDLINWKAQLEYKFMPGIKEKISRTKVDFMDMKEISSDASPEFFID 323

Query: 785  ILAGDKSILRKVFGQSRRFQPRKPATKAQAAVALTSGRLAKAIHMELSRLDTENSLILAE 964
            +LAGD+SI+RKVFGQS+RFQP KP+TKAQ+AVALTSGR+ + IH EL RL+ E     AE
Sbjct: 324  MLAGDRSIVRKVFGQSKRFQPNKPSTKAQSAVALTSGRMTEVIHTELLRLEAEKLSREAE 383

Query: 965  MEEIRSELLLRGDIQRVWDEKLNAVKAYGQEVTNHFQAAISDLEQEKTVRDINLKESLKE 1144
             EEIRS+LL RGDIQ  W EK+   K  G EV   + AA+SDLE+E+ V    L E+LKE
Sbjct: 384  AEEIRSQLLNRGDIQSFWSEKIKDEKIRGFEVEKDYLAAVSDLEEERIVHVNCLTENLKE 443

Query: 1145 RAAVDCQRKLLVGLKEEVNEMSERLSSERADYAAEQKNLEDMSIDIQAKQDGIIEAKSIL 1324
            +AA++CQ +LL  LK+EV+EMSERL+ ER  Y AEQ+NL+DM  ++Q KQ+G+++ KSIL
Sbjct: 444  KAAMECQSQLLFRLKDEVDEMSERLACERTGYMAEQRNLQDMLNELQNKQEGVLDVKSIL 503

Query: 1325 EAEKEALRMLRSWIEDEARRSQARAQVLEKVGRRWRWSEEA 1447
            EAEKEALR+LRSW+EDEAR++QARA+VLE+VGRRW+W  +A
Sbjct: 504  EAEKEALRILRSWVEDEARKNQARAKVLEEVGRRWKWDSDA 544


>emb|CAN78724.1| hypothetical protein VITISV_020007 [Vitis vinifera]
          Length = 836

 Score =  434 bits (1117), Expect = e-119
 Identities = 237/411 (57%), Positives = 295/411 (71%), Gaps = 13/411 (3%)
 Frame = +2

Query: 254  SVKKPLKRVIITVAADSTXXXXXXXXXXXXXXXDDVKENALCTRREYARWLVKANLVLER 433
            S  K +K V+I VAADST               DDV  + LCT+REYARWLV+ANL+LER
Sbjct: 400  SASKKVKHVLIPVAADSTQQEALLVLKKLKIIEDDVSADELCTKREYARWLVRANLLLER 459

Query: 434  NPKHRI--SILPSESIVQAFDDVDTEDSDFQFIQALAEAGIILSKLSEENYGSDQDDLKA 607
            +P+HRI  S LPS SI+ AFDDV+ ED D+  IQALAEAGII SKLS  N  S  D  K 
Sbjct: 460  DPRHRIFSSSLPSGSIISAFDDVNAEDRDYGSIQALAEAGIIPSKLSG-NSNSALDSSKV 518

Query: 608  QERINFYPESFLSRLDLINWKAQLEYSSIQQIEE-----------ISTKGVGFMDVSMIS 754
            Q  + F P+ F+SR DLINWKAQLEY  +  I+E           IS   V FMD+  IS
Sbjct: 519  QGEVYFSPDRFISRQDLINWKAQLEYKFMPGIKEKILKPDLFTVQISRTKVDFMDMKEIS 578

Query: 755  PEASAEFFMDILAGDKSILRKVFGQSRRFQPRKPATKAQAAVALTSGRLAKAIHMELSRL 934
             +AS EFF+D+LAGD+SI+RKVFGQS+RFQP KP+TKAQ+AVALTSGR+ + IH EL RL
Sbjct: 579  SDASPEFFIDMLAGDRSIVRKVFGQSKRFQPNKPSTKAQSAVALTSGRMTEVIHTELLRL 638

Query: 935  DTENSLILAEMEEIRSELLLRGDIQRVWDEKLNAVKAYGQEVTNHFQAAISDLEQEKTVR 1114
            + E     AE EEIRS+LL RGDIQ  W EK+   K  G EV   + AA+SDLE+E+ V 
Sbjct: 639  EAEKLSREAEAEEIRSQLLNRGDIQSFWSEKIKDEKIRGFEVEKDYLAAVSDLEEERIVH 698

Query: 1115 DINLKESLKERAAVDCQRKLLVGLKEEVNEMSERLSSERADYAAEQKNLEDMSIDIQAKQ 1294
               L E+LKE+AA++CQ +LL  LK+EV+EMSERL+ ER  Y AEQ+NL+DM  ++Q KQ
Sbjct: 699  VNCLTENLKEKAAMECQSQLLFRLKDEVDEMSERLACERTGYMAEQRNLQDMLNELQNKQ 758

Query: 1295 DGIIEAKSILEAEKEALRMLRSWIEDEARRSQARAQVLEKVGRRWRWSEEA 1447
            +G+++ KSILEAEKEALR+LRSW+EDEAR++QARA+VLE+VGRRW+W  +A
Sbjct: 759  EGVLDVKSILEAEKEALRILRSWVEDEARKNQARAKVLEEVGRRWKWDSDA 809


>ref|XP_002524393.1| conserved hypothetical protein [Ricinus communis]
            gi|223536354|gb|EEF38004.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 564

 Score =  426 bits (1094), Expect = e-116
 Identities = 244/483 (50%), Positives = 323/483 (66%), Gaps = 3/483 (0%)
 Frame = +2

Query: 8    LSFLLRGAGVSAVILIAAIVYYSSFTRKGFKLKLNGPLN-VFQLFLKRADSVDXXXXXXX 184
            LS +L G G   V ++AA  Y+S F+RKGF LK     + +       +D ++       
Sbjct: 99   LSAILIGGGSCVVAMVAAAAYFS-FSRKGFNLKFQSQSHGITSPIESTSDRIEVVS---- 153

Query: 185  XXXXXXXXPDYTSEEKVEISASESVKKPLKRVIITVAADSTXXXXXXXXXXXXXXXDDVK 364
                     ++  E   E  A  S ++ L+R  + V  DS                DDV+
Sbjct: 154  ---------EFIPEAPGEALAPASSQR-LERDKVAVLVDSNQLEALSVLKKLKIIEDDVR 203

Query: 365  ENALCTRREYARWLVKANLVLERNPKHRISILP-SESIVQAFDDVDTEDSDFQFIQALAE 541
             + LCTRREYARWLV+ N +LERNPKHRI+ L    SI+ AFDDV  ED DF  IQALAE
Sbjct: 204  ADELCTRREYARWLVRLNSLLERNPKHRIACLSLCGSILAAFDDVSVEDPDFDSIQALAE 263

Query: 542  AGIILSKLSEENYGSDQDDLKAQERINFYPESFLSRLDLINWKAQLEYSSIQQI-EEIST 718
            AG I SK+S  +  SD    K  E   F+PE F+SR D+INWKAQLEY  + +I E++S 
Sbjct: 264  AGFIPSKISGSHCCSDTS--KGDESFCFHPERFISRQDMINWKAQLEYQFLPRITEQMSR 321

Query: 719  KGVGFMDVSMISPEASAEFFMDILAGDKSILRKVFGQSRRFQPRKPATKAQAAVALTSGR 898
              V +MD+  IS EAS+EF +D+LA DKSI+RKVFGQSRRFQP KP TKAQAAVAL SGR
Sbjct: 322  IRVDYMDMKDISSEASSEFLIDLLAADKSIIRKVFGQSRRFQPNKPLTKAQAAVALISGR 381

Query: 899  LAKAIHMELSRLDTENSLILAEMEEIRSELLLRGDIQRVWDEKLNAVKAYGQEVTNHFQA 1078
            +++A++ E+ R++ +NS   A ++EIRSELL +GDI+R W EK +  +  G EV   +  
Sbjct: 382  MSEAVYNEILRVEADNSSRQAALKEIRSELLEKGDIERFWREKNSEERTRGLEVQKLYVT 441

Query: 1079 AISDLEQEKTVRDINLKESLKERAAVDCQRKLLVGLKEEVNEMSERLSSERADYAAEQKN 1258
             + DLEQEKTV+   L E LKERAA+DCQR+LL+ LKEEV+EMSERL+SERA Y AEQ N
Sbjct: 442  VLHDLEQEKTVQLKALAEYLKERAAMDCQRQLLLHLKEEVDEMSERLTSERAMYVAEQGN 501

Query: 1259 LEDMSIDIQAKQDGIIEAKSILEAEKEALRMLRSWIEDEARRSQARAQVLEKVGRRWRWS 1438
            L+++  ++QA+Q+G+++ K +LEAE EA+R+LRSW+EDEAR+SQARA+VLE+VGRRW+W 
Sbjct: 502  LQELLGELQARQEGMLDKKCVLEAEIEAIRILRSWVEDEARKSQARAKVLEEVGRRWKWD 561

Query: 1439 EEA 1447
             +A
Sbjct: 562  NQA 564


>ref|XP_002315964.1| predicted protein [Populus trichocarpa] gi|222865004|gb|EEF02135.1|
            predicted protein [Populus trichocarpa]
          Length = 566

 Score =  423 bits (1087), Expect = e-116
 Identities = 241/480 (50%), Positives = 319/480 (66%), Gaps = 3/480 (0%)
 Frame = +2

Query: 17   LLRGAGVSAVILIAAIVYYSSFTRKGFKLKLNGPLNVFQLFLKRADSVDXXXXXXXXXXX 196
            ++ G G     L+AAI Y+   +RKGF+ + + P +       + ++             
Sbjct: 98   IIAGIGTCVTALLAAIAYFL-LSRKGFEFRFHSPSSTETTVYDKIET-------NMSDEN 149

Query: 197  XXXXPDYTSEEKVEISASESVKKPLKRVIITVAADSTXXXXXXXXXXXXXXXDDVKENAL 376
                 D   E   + +     K+ L+RV ++V  DS                DDV  + L
Sbjct: 150  AAAASDAAMEGVSDATGITLHKEKLERVKVSVYVDSNQLETLLALKKLKIIEDDVAADEL 209

Query: 377  CTRREYARWLVKANLVLERNPKHRI--SILPSESIVQAFDDVDTEDSDFQFIQALAEAGI 550
            CTRREYARWL++ N +LERN KHRI  SI  S S++ AFDD+  ED DF+ IQALAE+GI
Sbjct: 210  CTRREYARWLLRLNSMLERNQKHRIVPSISLSGSVIAAFDDLGVEDPDFESIQALAESGI 269

Query: 551  ILSKLSEENYGSDQDDLKAQERINFYPESFLSRLDLINWKAQLEYSSIQQI-EEISTKGV 727
            I SKLS  N  +D  D ++     FYPE F+SR DLINWKAQLEY  +  I E++S   V
Sbjct: 270  IPSKLSGTNSCADSSDGRS---FCFYPERFISRQDLINWKAQLEYGFLPGITEQMSKTKV 326

Query: 728  GFMDVSMISPEASAEFFMDILAGDKSILRKVFGQSRRFQPRKPATKAQAAVALTSGRLAK 907
             +MDV  IS +A+ E   D+LAGDKSI+RKVFGQSRRFQP KP TKAQAAVAL SGR+++
Sbjct: 327  YYMDVKEISSDATPELLTDMLAGDKSIIRKVFGQSRRFQPNKPLTKAQAAVALISGRMSE 386

Query: 908  AIHMELSRLDTENSLILAEMEEIRSELLLRGDIQRVWDEKLNAVKAYGQEVTNHFQAAIS 1087
            A++ E+ RL+ E SL  A ++EIR+E L RGDI+R WDEK+N  K  G EV   + AA+ 
Sbjct: 387  AVYNEILRLEAEKSLRQATVKEIRNEFLERGDIKRFWDEKMNEEKIRGFEVEKLYIAALH 446

Query: 1088 DLEQEKTVRDINLKESLKERAAVDCQRKLLVGLKEEVNEMSERLSSERADYAAEQKNLED 1267
            DLE+EK V+    +E LKE+AA+DCQR+LL+ LKEEV+EMSERL+SER+ YAAEQ NL++
Sbjct: 447  DLEEEKIVQVKTYEEYLKEKAAMDCQRQLLLHLKEEVDEMSERLASERSVYAAEQCNLQE 506

Query: 1268 MSIDIQAKQDGIIEAKSILEAEKEALRMLRSWIEDEARRSQARAQVLEKVGRRWRWSEEA 1447
            +   +Q KQ+ +++ KSILEAE EALR+LRSW+EDEAR+SQARA+VLE+VGRRW+W  +A
Sbjct: 507  LLSKLQFKQEVMLDTKSILEAEIEALRILRSWVEDEARKSQARARVLEEVGRRWKWDNQA 566


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