BLASTX nr result
ID: Coptis24_contig00006609
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00006609 (913 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002531780.1| protein with unknown function [Ricinus commu... 76 1e-11 ref|XP_002304305.1| predicted protein [Populus trichocarpa] gi|1... 76 1e-11 ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group] g... 75 2e-11 gb|AFK37208.1| unknown [Medicago truncatula] 75 3e-11 gb|AFM30910.1| small GTPase [Hevea brasiliensis] 74 4e-11 >ref|XP_002531780.1| protein with unknown function [Ricinus communis] gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis] Length = 203 Score = 75.9 bits (185), Expect = 1e-11 Identities = 47/110 (42%), Positives = 55/110 (50%) Frame = +2 Query: 188 AFADEIGIPFMETSAKSSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSLALLVS*I 367 AFADEIGIPFMETSAK++TN F+++A + Sbjct: 138 AFADEIGIPFMETSAKNATNVEQA-------------------------FMAMAAEIK-- 170 Query: 368 DLY*FR*LWQSCLALRYXRMASQPGLNNARPPTVQIRGQPVGQKTSCCSS 517 RMASQP +NNARPPTVQIRGQPV QK+ CCSS Sbjct: 171 -----------------NRMASQPAMNNARPPTVQIRGQPVNQKSGCCSS 203 >ref|XP_002304305.1| predicted protein [Populus trichocarpa] gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa] gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa] Length = 203 Score = 75.9 bits (185), Expect = 1e-11 Identities = 47/110 (42%), Positives = 55/110 (50%) Frame = +2 Query: 188 AFADEIGIPFMETSAKSSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSLALLVS*I 367 AFADEIGIPFMETSAK++TN F+++A + Sbjct: 138 AFADEIGIPFMETSAKNATNVEQA-------------------------FMAMAAEIK-- 170 Query: 368 DLY*FR*LWQSCLALRYXRMASQPGLNNARPPTVQIRGQPVGQKTSCCSS 517 RMASQP +NNARPPTVQIRGQPV QK+ CCSS Sbjct: 171 -----------------NRMASQPAMNNARPPTVQIRGQPVNQKSGCCSS 203 >ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group] gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group] gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group] gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group] gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group] gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group] Length = 203 Score = 75.1 bits (183), Expect = 2e-11 Identities = 47/110 (42%), Positives = 55/110 (50%) Frame = +2 Query: 188 AFADEIGIPFMETSAKSSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSLALLVS*I 367 AFADE+GIPFMETSAK++TN F+++A + Sbjct: 138 AFADEMGIPFMETSAKNATNVEQA-------------------------FMAMAASIK-- 170 Query: 368 DLY*FR*LWQSCLALRYXRMASQPGLNNARPPTVQIRGQPVGQKTSCCSS 517 RMASQP +NARPPTVQIRGQPV QKTSCCSS Sbjct: 171 -----------------DRMASQPAASNARPPTVQIRGQPVNQKTSCCSS 203 >gb|AFK37208.1| unknown [Medicago truncatula] Length = 203 Score = 74.7 bits (182), Expect = 3e-11 Identities = 46/109 (42%), Positives = 53/109 (48%) Frame = +2 Query: 191 FADEIGIPFMETSAKSSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSLALLVS*ID 370 FAD+IGIPFMETSAK +TN F+++A + Sbjct: 139 FADQIGIPFMETSAKDATNVEGA-------------------------FMAMAAAIK--- 170 Query: 371 LY*FR*LWQSCLALRYXRMASQPGLNNARPPTVQIRGQPVGQKTSCCSS 517 RMASQP NNARPPTVQIRGQPVGQK+ CCSS Sbjct: 171 ----------------DRMASQPSANNARPPTVQIRGQPVGQKSGCCSS 203 >gb|AFM30910.1| small GTPase [Hevea brasiliensis] Length = 203 Score = 74.3 bits (181), Expect = 4e-11 Identities = 47/110 (42%), Positives = 54/110 (49%) Frame = +2 Query: 188 AFADEIGIPFMETSAKSSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSLALLVS*I 367 AFADEIGIPFMETSAK++TN F+++A + Sbjct: 138 AFADEIGIPFMETSAKNATNVEEA-------------------------FMAMAADIK-- 170 Query: 368 DLY*FR*LWQSCLALRYXRMASQPGLNNARPPTVQIRGQPVGQKTSCCSS 517 RMASQP NNARPPTVQIRGQPV QK+ CCSS Sbjct: 171 -----------------NRMASQPAANNARPPTVQIRGQPVNQKSGCCSS 203