BLASTX nr result

ID: Coptis24_contig00006609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006609
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531780.1| protein with unknown function [Ricinus commu...    76   1e-11
ref|XP_002304305.1| predicted protein [Populus trichocarpa] gi|1...    76   1e-11
ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group] g...    75   2e-11
gb|AFK37208.1| unknown [Medicago truncatula]                           75   3e-11
gb|AFM30910.1| small GTPase [Hevea brasiliensis]                       74   4e-11

>ref|XP_002531780.1| protein with unknown function [Ricinus communis]
           gi|223528573|gb|EEF30594.1| protein with unknown
           function [Ricinus communis]
          Length = 203

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 47/110 (42%), Positives = 55/110 (50%)
 Frame = +2

Query: 188 AFADEIGIPFMETSAKSSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSLALLVS*I 367
           AFADEIGIPFMETSAK++TN                             F+++A  +   
Sbjct: 138 AFADEIGIPFMETSAKNATNVEQA-------------------------FMAMAAEIK-- 170

Query: 368 DLY*FR*LWQSCLALRYXRMASQPGLNNARPPTVQIRGQPVGQKTSCCSS 517
                             RMASQP +NNARPPTVQIRGQPV QK+ CCSS
Sbjct: 171 -----------------NRMASQPAMNNARPPTVQIRGQPVNQKSGCCSS 203


>ref|XP_002304305.1| predicted protein [Populus trichocarpa] gi|118485751|gb|ABK94725.1|
           unknown [Populus trichocarpa]
           gi|222841737|gb|EEE79284.1| predicted protein [Populus
           trichocarpa]
          Length = 203

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 47/110 (42%), Positives = 55/110 (50%)
 Frame = +2

Query: 188 AFADEIGIPFMETSAKSSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSLALLVS*I 367
           AFADEIGIPFMETSAK++TN                             F+++A  +   
Sbjct: 138 AFADEIGIPFMETSAKNATNVEQA-------------------------FMAMAAEIK-- 170

Query: 368 DLY*FR*LWQSCLALRYXRMASQPGLNNARPPTVQIRGQPVGQKTSCCSS 517
                             RMASQP +NNARPPTVQIRGQPV QK+ CCSS
Sbjct: 171 -----------------NRMASQPAMNNARPPTVQIRGQPVNQKSGCCSS 203


>ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
           gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa
           Japonica Group] gi|125524668|gb|EAY72782.1| hypothetical
           protein OsI_00645 [Oryza sativa Indica Group]
           gi|125569264|gb|EAZ10779.1| hypothetical protein
           OsJ_00614 [Oryza sativa Japonica Group]
           gi|215697672|dbj|BAG91666.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765495|dbj|BAG87192.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 203

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 47/110 (42%), Positives = 55/110 (50%)
 Frame = +2

Query: 188 AFADEIGIPFMETSAKSSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSLALLVS*I 367
           AFADE+GIPFMETSAK++TN                             F+++A  +   
Sbjct: 138 AFADEMGIPFMETSAKNATNVEQA-------------------------FMAMAASIK-- 170

Query: 368 DLY*FR*LWQSCLALRYXRMASQPGLNNARPPTVQIRGQPVGQKTSCCSS 517
                             RMASQP  +NARPPTVQIRGQPV QKTSCCSS
Sbjct: 171 -----------------DRMASQPAASNARPPTVQIRGQPVNQKTSCCSS 203


>gb|AFK37208.1| unknown [Medicago truncatula]
          Length = 203

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 46/109 (42%), Positives = 53/109 (48%)
 Frame = +2

Query: 191 FADEIGIPFMETSAKSSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSLALLVS*ID 370
           FAD+IGIPFMETSAK +TN                             F+++A  +    
Sbjct: 139 FADQIGIPFMETSAKDATNVEGA-------------------------FMAMAAAIK--- 170

Query: 371 LY*FR*LWQSCLALRYXRMASQPGLNNARPPTVQIRGQPVGQKTSCCSS 517
                            RMASQP  NNARPPTVQIRGQPVGQK+ CCSS
Sbjct: 171 ----------------DRMASQPSANNARPPTVQIRGQPVGQKSGCCSS 203


>gb|AFM30910.1| small GTPase [Hevea brasiliensis]
          Length = 203

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 47/110 (42%), Positives = 54/110 (49%)
 Frame = +2

Query: 188 AFADEIGIPFMETSAKSSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSLALLVS*I 367
           AFADEIGIPFMETSAK++TN                             F+++A  +   
Sbjct: 138 AFADEIGIPFMETSAKNATNVEEA-------------------------FMAMAADIK-- 170

Query: 368 DLY*FR*LWQSCLALRYXRMASQPGLNNARPPTVQIRGQPVGQKTSCCSS 517
                             RMASQP  NNARPPTVQIRGQPV QK+ CCSS
Sbjct: 171 -----------------NRMASQPAANNARPPTVQIRGQPVNQKSGCCSS 203


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