BLASTX nr result

ID: Coptis24_contig00006594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006594
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623159.1| hypothetical protein MTR_7g065150 [Medicago ...    80   4e-13
ref|XP_002281905.1| PREDICTED: uncharacterized protein LOC100263...    79   1e-12
emb|CBI31586.3| unnamed protein product [Vitis vinifera]               76   6e-12
ref|XP_002314144.1| predicted protein [Populus trichocarpa] gi|2...    76   6e-12
ref|XP_002520485.1| conserved hypothetical protein [Ricinus comm...    75   8e-12

>ref|XP_003623159.1| hypothetical protein MTR_7g065150 [Medicago truncatula]
           gi|355498174|gb|AES79377.1| hypothetical protein
           MTR_7g065150 [Medicago truncatula]
           gi|388492720|gb|AFK34426.1| unknown [Medicago
           truncatula]
          Length = 156

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 39/59 (66%), Positives = 43/59 (72%)
 Frame = +2

Query: 2   RVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKDGENDDPDGSASRGNWWQGSLYY 178
           RV+P +LSSSI+YG QDVYS   + R S     YKKDG  DD  GSASRGNWWQGSLYY
Sbjct: 99  RVQPCHLSSSIYYGGQDVYSRPQSARDSGLNTMYKKDGGEDD-SGSASRGNWWQGSLYY 156


>ref|XP_002281905.1| PREDICTED: uncharacterized protein LOC100263768 [Vitis vinifera]
           gi|297745986|emb|CBI16042.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 38/63 (60%), Positives = 48/63 (76%), Gaps = 4/63 (6%)
 Frame = +2

Query: 2   RVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKDGENDDPDGS----ASRGNWWQGS 169
           RVEP +LSSS++YG QD+YSN S+T++S     +KKD   DDP+G+    ASRGNWWQGS
Sbjct: 94  RVEPCHLSSSLYYGGQDIYSNSSSTQTSGSYPVFKKD--EDDPNGNNSQGASRGNWWQGS 151

Query: 170 LYY 178
           LYY
Sbjct: 152 LYY 154


>emb|CBI31586.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 38/62 (61%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
 Frame = +2

Query: 5   VEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKDGENDDPDG----SASRGNWWQGSL 172
           VEP Y SSSI+YG Q+VYS  +    S P  T KKDG  DD +G    SASRGNWWQGSL
Sbjct: 99  VEPCYFSSSIYYGGQEVYSPNARNTESHPIVTMKKDGGEDDLNGSNSNSASRGNWWQGSL 158

Query: 173 YY 178
           YY
Sbjct: 159 YY 160


>ref|XP_002314144.1| predicted protein [Populus trichocarpa] gi|222850552|gb|EEE88099.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 4/63 (6%)
 Frame = +2

Query: 2   RVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKDGENDDPDG----SASRGNWWQGS 169
           RVEP +LSSS++YG Q+ YS   +T+ +     +KKDG  DDP+G    SASRGNWWQGS
Sbjct: 100 RVEPCHLSSSLYYGGQENYSQSPSTQMAGSYPIFKKDGGEDDPNGSNPHSASRGNWWQGS 159

Query: 170 LYY 178
           LYY
Sbjct: 160 LYY 162


>ref|XP_002520485.1| conserved hypothetical protein [Ricinus communis]
           gi|223540327|gb|EEF41898.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 160

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
 Frame = +2

Query: 2   RVEPHYLSSSIFYGAQDVYSNQSTTRSSVPAQTYKKDGENDDPDGS----ASRGNWWQGS 169
           R EP +LSSS++YG QD YS   ++R+S     +KKDG +DDP+G+    ASRGNWWQGS
Sbjct: 98  RGEPCHLSSSLYYGGQDNYSQPPSSRNSGSYPIFKKDGVDDDPNGNNSNGASRGNWWQGS 157

Query: 170 LYY 178
           LYY
Sbjct: 158 LYY 160


Top