BLASTX nr result

ID: Coptis24_contig00006587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006587
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552018.1| PREDICTED: probable polygalacturonase non-ca...   202   2e-50
ref|XP_003532010.1| PREDICTED: probable polygalacturonase non-ca...   199   3e-49
ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_002318036.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-48

>ref|XP_003552018.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like [Glycine max]
          Length = 622

 Score =  202 bits (515), Expect = 2e-50
 Identities = 91/109 (83%), Positives = 100/109 (91%)
 Frame = -1

Query: 498 VQGSKKDVMIGEVKGINGGKVTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAK 319
           V+GS K+VM+G VKG+NGGKVTKSVSCHQSLFPYL+YYCHSVPKVRVYEAD+LD E KAK
Sbjct: 514 VKGSNKNVMVGRVKGMNGGKVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPESKAK 573

Query: 318 INKGVAICHLDTTSWSPTHGAFVALGSSPGHTEVCHWIFENDMTWAIAD 172
           IN GVAICHLDTT+WSPTHGAF+ALGS PG  EVCHWIFEND+TW IAD
Sbjct: 574 INHGVAICHLDTTAWSPTHGAFLALGSGPGRIEVCHWIFENDLTWTIAD 622


>ref|XP_003532010.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like [Glycine max]
          Length = 627

 Score =  199 bits (505), Expect = 3e-49
 Identities = 88/109 (80%), Positives = 99/109 (90%)
 Frame = -1

Query: 498 VQGSKKDVMIGEVKGINGGKVTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAK 319
           V GS K+VM+G VKG+NGGKVT+SVSCHQSLFPY++YYCHSVPKVRVY+AD+LD E KAK
Sbjct: 519 VNGSNKNVMVGRVKGMNGGKVTQSVSCHQSLFPYMLYYCHSVPKVRVYQADLLDPESKAK 578

Query: 318 INKGVAICHLDTTSWSPTHGAFVALGSSPGHTEVCHWIFENDMTWAIAD 172
           IN GVAICHLDTT+WSPTHGAF+ALGS PG  EVCHWIFEND+TW IAD
Sbjct: 579 INHGVAICHLDTTAWSPTHGAFMALGSGPGRIEVCHWIFENDLTWTIAD 627


>ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|222863660|gb|EEF00791.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  196 bits (498), Expect = 2e-48
 Identities = 87/109 (79%), Positives = 98/109 (89%)
 Frame = -1

Query: 498 VQGSKKDVMIGEVKGINGGKVTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAK 319
           V+GSKK+V IG +KGINGG+VTKSVSCHQSL+PYL+YYCHSVPKVRVYEAD+LD   K K
Sbjct: 505 VEGSKKNVTIGTIKGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVYEADLLDPNSKTK 564

Query: 318 INKGVAICHLDTTSWSPTHGAFVALGSSPGHTEVCHWIFENDMTWAIAD 172
           IN GVAICHLDT+SWSPTHGAF+ALGS PG  EVCHWIFENDMTW +A+
Sbjct: 565 INHGVAICHLDTSSWSPTHGAFLALGSGPGRIEVCHWIFENDMTWTLAE 613


>ref|XP_002318036.1| predicted protein [Populus trichocarpa] gi|222858709|gb|EEE96256.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  196 bits (497), Expect = 2e-48
 Identities = 89/109 (81%), Positives = 98/109 (89%)
 Frame = -1

Query: 498 VQGSKKDVMIGEVKGINGGKVTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAK 319
           V GSKK VMIG V+GINGG+VTKSVSCHQSL+PYL+YYCHSVP+VRVYEADI+DVE K K
Sbjct: 505 VNGSKKRVMIGSVEGINGGQVTKSVSCHQSLYPYLLYYCHSVPRVRVYEADIVDVESKEK 564

Query: 318 INKGVAICHLDTTSWSPTHGAFVALGSSPGHTEVCHWIFENDMTWAIAD 172
           IN GVAICH+DT++W P HGAFVALGSSPG  EVCHWIFENDMTW IAD
Sbjct: 565 INVGVAICHVDTSAWGPEHGAFVALGSSPGKIEVCHWIFENDMTWTIAD 613


>ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|222851597|gb|EEE89144.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score =  195 bits (496), Expect = 3e-48
 Identities = 86/109 (78%), Positives = 98/109 (89%)
 Frame = -1

Query: 498 VQGSKKDVMIGEVKGINGGKVTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAK 319
           V GSKK++MIG +KGINGG+VT+SVSCHQ+L+PYL+YYCHSVPKVRVYEAD+LD   KA 
Sbjct: 490 VNGSKKNIMIGSIKGINGGRVTRSVSCHQTLYPYLLYYCHSVPKVRVYEADLLDPNSKAT 549

Query: 318 INKGVAICHLDTTSWSPTHGAFVALGSSPGHTEVCHWIFENDMTWAIAD 172
           IN GVAICHLDT+SWSPTHGAF+ALGS PG  EVCHWIFENDMTW IA+
Sbjct: 550 INHGVAICHLDTSSWSPTHGAFLALGSGPGRIEVCHWIFENDMTWTIAE 598


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