BLASTX nr result

ID: Coptis24_contig00006571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006571
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284749.2| PREDICTED: ethylene-responsive transcription...   277   1e-72
emb|CBI16240.3| unnamed protein product [Vitis vinifera]              277   1e-72
ref|XP_002530247.1| Protein AINTEGUMENTA, putative [Ricinus comm...   263   3e-68
ref|XP_002525190.1| Floral homeotic protein APETALA2, putative [...   256   2e-66
ref|XP_002326164.1| AP2 domain-containing transcription factor [...   246   3e-63

>ref|XP_002284749.2| PREDICTED: ethylene-responsive transcription factor RAP2-7-like
           [Vitis vinifera]
          Length = 500

 Score =  277 bits (709), Expect = 1e-72
 Identities = 150/231 (64%), Positives = 169/231 (73%), Gaps = 6/231 (2%)
 Frame = +2

Query: 2   ELKQMKDLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF 181
           +LKQMK+LTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF
Sbjct: 223 DLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF 282

Query: 182 DSEVDAARAYDKAAIKCNGKEAVTNFELSTYEGEITSEAATGDSEHNLDLNLGISLSYCD 361
           DSEV+AARAYDKAAIKCNG+EAVTNFE STYEGE+  EA+   S+HNLDLNLGIS    +
Sbjct: 283 DSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMIPEASNEGSDHNLDLNLGISPPLSN 342

Query: 362 SQKGNNNTG-FELHGSPFNMSDTGRRMVPPPN--SAEHPHV--LTMASERPPIWTGSYPS 526
             K  +  G  + H    +  +  R M+  PN  +A  P    L M SE PP+WTG YPS
Sbjct: 343 GPKEIDGLGHLQFHSGSHDAHNGRRSMMENPNIETAGDPSFKGLAMTSEHPPLWTGVYPS 402

Query: 527 FFPNYEGRAIEKRVEVGPPGPSNSDWAWQMHDHGGSAIPMPPFS-AASSGF 676
           FFP YE RA E+R+E         +W WQMH    +A PMP FS AASSGF
Sbjct: 403 FFPGYEERATERRIEAS-SSQGLPNWGWQMHGQ-VTATPMPLFSTAASSGF 451



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +2

Query: 50  LRRQSTGFSRGSSKYRGVTLHK-CGRWEARMGQFLGKKYIYLGLFDSEVDAARAYDKAAI 226
           +++   G    SS+YRGVT ++  GRWE+ +      K +YLG FD+   AARAYD+AAI
Sbjct: 147 VKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDC--GKQVYLGGFDTAHAAARAYDRAAI 204

Query: 227 KCNGKEAVTNFELSTYEGEI 286
           K  G +A  NF LS Y+ ++
Sbjct: 205 KFRGVDADINFNLSDYDEDL 224


>emb|CBI16240.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score =  277 bits (709), Expect = 1e-72
 Identities = 150/231 (64%), Positives = 169/231 (73%), Gaps = 6/231 (2%)
 Frame = +2

Query: 2   ELKQMKDLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF 181
           +LKQMK+LTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF
Sbjct: 201 DLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF 260

Query: 182 DSEVDAARAYDKAAIKCNGKEAVTNFELSTYEGEITSEAATGDSEHNLDLNLGISLSYCD 361
           DSEV+AARAYDKAAIKCNG+EAVTNFE STYEGE+  EA+   S+HNLDLNLGIS    +
Sbjct: 261 DSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMIPEASNEGSDHNLDLNLGISPPLSN 320

Query: 362 SQKGNNNTG-FELHGSPFNMSDTGRRMVPPPN--SAEHPHV--LTMASERPPIWTGSYPS 526
             K  +  G  + H    +  +  R M+  PN  +A  P    L M SE PP+WTG YPS
Sbjct: 321 GPKEIDGLGHLQFHSGSHDAHNGRRSMMENPNIETAGDPSFKGLAMTSEHPPLWTGVYPS 380

Query: 527 FFPNYEGRAIEKRVEVGPPGPSNSDWAWQMHDHGGSAIPMPPFS-AASSGF 676
           FFP YE RA E+R+E         +W WQMH    +A PMP FS AASSGF
Sbjct: 381 FFPGYEERATERRIEAS-SSQGLPNWGWQMHGQ-VTATPMPLFSTAASSGF 429



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +2

Query: 50  LRRQSTGFSRGSSKYRGVTLHK-CGRWEARMGQFLGKKYIYLGLFDSEVDAARAYDKAAI 226
           +++   G    SS+YRGVT ++  GRWE+ +      K +YLG FD+   AARAYD+AAI
Sbjct: 125 VKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDC--GKQVYLGGFDTAHAAARAYDRAAI 182

Query: 227 KCNGKEAVTNFELSTYEGEI 286
           K  G +A  NF LS Y+ ++
Sbjct: 183 KFRGVDADINFNLSDYDEDL 202


>ref|XP_002530247.1| Protein AINTEGUMENTA, putative [Ricinus communis]
           gi|223530251|gb|EEF32153.1| Protein AINTEGUMENTA,
           putative [Ricinus communis]
          Length = 499

 Score =  263 bits (671), Expect = 3e-68
 Identities = 144/228 (63%), Positives = 170/228 (74%), Gaps = 3/228 (1%)
 Frame = +2

Query: 2   ELKQMKDLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF 181
           +LKQMK+LTKEEFVHILRR STGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF
Sbjct: 229 DLKQMKNLTKEEFVHILRRHSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF 288

Query: 182 DSEVDAARAYDKAAIKCNGKEAVTNFELSTYEGEITSEAATGDSEHNLDLNLGISLSYCD 361
           DSEV+AARAYDKAAIKCNG+EAVTNFE STYEGE+ S+A++  SEHNLDLNLGIS S+ +
Sbjct: 289 DSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMISKASSEGSEHNLDLNLGISPSFGN 348

Query: 362 SQKGNNNTGFELHGSPFNM-SDTGRRMVPPPNSAEHPHVLTM-ASERPPIWTGSYPSFFP 535
             K N     +LH  P+++ S + R         + P    +  S+ P  W G YP+FFP
Sbjct: 349 CLKENEGHQ-QLHSGPYDVYSKSSRENATSAMVGDPPFKGPLRTSDHPMFWNGIYPNFFP 407

Query: 536 NYEGRAIEKRVEVGPPGPSNSDWAWQMHDHGGSAIPMPPFS-AASSGF 676
            +E RA +KR+E+G     + +WAWQMH    +A PM  FS AASSGF
Sbjct: 408 -HEERATDKRIELG-SSQGHPNWAWQMHGQ-VTATPMTMFSTAASSGF 452



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +2

Query: 50  LRRQSTGFSRGSSKYRGVTLHK-CGRWEARMGQFLGKKYIYLGLFDSEVDAARAYDKAAI 226
           +++   G    SS+YRGVT ++  GRWE+ +      K +YLG FD+   AARAYD+AAI
Sbjct: 153 VKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDC--GKQVYLGGFDTAHAAARAYDRAAI 210

Query: 227 KCNGKEAVTNFELSTYEGEI 286
           K  G +A  NF L  Y+ ++
Sbjct: 211 KFRGIDADINFNLGDYDEDL 230


>ref|XP_002525190.1| Floral homeotic protein APETALA2, putative [Ricinus communis]
           gi|223535487|gb|EEF37156.1| Floral homeotic protein
           APETALA2, putative [Ricinus communis]
          Length = 467

 Score =  256 bits (655), Expect = 2e-66
 Identities = 141/235 (60%), Positives = 162/235 (68%), Gaps = 10/235 (4%)
 Frame = +2

Query: 2   ELKQMKDLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF 181
           ++KQM + TKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF
Sbjct: 196 DIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF 255

Query: 182 DSEVDAARAYDKAAIKCNGKEAVTNFELSTYEGEITSEAATGDSEHNLDLNLGISLSYCD 361
           D+E++AARAYDKAAIKCNG+EAVTNFE STYEGEI SE    D   NLDLNLGI+     
Sbjct: 256 DTEIEAARAYDKAAIKCNGREAVTNFEPSTYEGEIMSEVNNADGNQNLDLNLGIA---PP 312

Query: 362 SQKGNNNTGFELHGSPFNMSDTGR-----RMVPPPNSA----EHPHVLTMASERPPIWTG 514
              G      E  G P+  S  GR     +M+    SA    E P+  +M  E PP+W G
Sbjct: 313 DTSGTQKINIETSGFPYQSSWDGRPNDRGQMILSSGSATLKDELPYDPSMPFEHPPLWGG 372

Query: 515 SYPSFFPNYEGRAIEKRVEVGPPGPSNSDWAWQMHDHGGSAIPMPPFS-AASSGF 676
            + +FFP Y+ RA+EKR+EV     S  +W WQ     G A P+P FS AASSGF
Sbjct: 373 LHSNFFPIYKERAMEKRMEV----DSWPNWTWQAQGPCGGANPLPFFSTAASSGF 423



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +2

Query: 50  LRRQSTGFSRGSSKYRGVTLHK-CGRWEARMGQFLGKKYIYLGLFDSEVDAARAYDKAAI 226
           +++   G    SS+YRGVT ++  GRWE+ +      K +YLG FD+   AARAYD+AAI
Sbjct: 120 VKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDC--GKQVYLGGFDTAHAAARAYDRAAI 177

Query: 227 KCNGKEAVTNFELSTYEGEI 286
           K  G EA  NF +S Y+ +I
Sbjct: 178 KFRGIEADINFNVSDYDEDI 197


>ref|XP_002326164.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222833357|gb|EEE71834.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 496

 Score =  246 bits (628), Expect = 3e-63
 Identities = 145/237 (61%), Positives = 161/237 (67%), Gaps = 12/237 (5%)
 Frame = +2

Query: 2   ELKQMKDLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF 181
           ++KQM++ TKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF
Sbjct: 226 DIKQMRNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLF 285

Query: 182 DSEVDAARAYDKAAIKCNGKEAVTNFELSTYEGEITSEAATGDSEHNLDLNLGIS-LSYC 358
           DSE +AARAYDKAAIKCNG+EAVTNFE STYEGEI SE   GD   NLDLNLGI+     
Sbjct: 286 DSETEAARAYDKAAIKCNGREAVTNFEPSTYEGEILSEPNNGDGNQNLDLNLGIAPPDTS 345

Query: 359 DSQKGNNNTGFELHGSPFNMSDTGRRMVPPP---NSA------EHPHVLTMASERPPIWT 511
           D  K N+N G    G  F     G  +   P   NSA      + P+   M S  PP W 
Sbjct: 346 DGLKVNSNMG----GFYFQSGWDGLSIDRAPKILNSASATMKNQQPNGPGMTSVHPPTWD 401

Query: 512 GSYPSFFPNYEGRAIEKRVEVGPPGPSNSDWAWQMH-DHGGSAIPMPPFS-AASSGF 676
           G     FP YE RAIEKR+EV     S  +W  Q+   +GG A P+P FS AASSGF
Sbjct: 402 GVNHHIFPIYEERAIEKRMEV----DSFPNWTRQIQGPYGGGANPLPLFSTAASSGF 454



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +2

Query: 50  LRRQSTGFSRGSSKYRGVTLHK-CGRWEARMGQFLGKKYIYLGLFDSEVDAARAYDKAAI 226
           +++   G    SS+YRGVT ++  GRWE+ +      K +YLG FD+   AAR YD+AAI
Sbjct: 150 VKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDC--GKQVYLGGFDTAHAAARVYDRAAI 207

Query: 227 KCNGKEAVTNFELSTYEGEI 286
           K  G +A  NF ++ Y+ +I
Sbjct: 208 KFRGVDADINFNVTDYDEDI 227


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