BLASTX nr result

ID: Coptis24_contig00006563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006563
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285400.1| PREDICTED: uncharacterized protein LOC100250...   269   8e-70
ref|XP_003633082.1| PREDICTED: uncharacterized protein LOC100250...   268   1e-69
ref|XP_004139294.1| PREDICTED: uncharacterized protein LOC101217...   261   3e-67
gb|ABK93674.1| unknown [Populus trichocarpa]                          261   3e-67
ref|XP_002308974.1| predicted protein [Populus trichocarpa] gi|2...   256   7e-66

>ref|XP_002285400.1| PREDICTED: uncharacterized protein LOC100250952 isoform 1 [Vitis
           vinifera] gi|297738994|emb|CBI28239.3| unnamed protein
           product [Vitis vinifera]
          Length = 283

 Score =  269 bits (688), Expect = 8e-70
 Identities = 156/296 (52%), Positives = 191/296 (64%), Gaps = 10/296 (3%)
 Frame = +2

Query: 26  MSAIVCGKRSFFEELPTTPAALXXXXXXXXXXXXPNRXXXXXXXXXXXXXXXXXLINFQQ 205
           MSAIVCGKRSFFE+LPTTP                 R                   +  Q
Sbjct: 1   MSAIVCGKRSFFEDLPTTPPV-------------SKRIRCSSSSPVRFSPPRSISASPSQ 47

Query: 206 SDNNGPSSPALAHLQTMFPEMDIKLLEKALNESEN-LDSAIKSLNELRLGSVERNSTSAA 382
           S +    +  L HL+ +FP+MD + LEKAL E  N LDS IKSLNELRLGS + N    A
Sbjct: 48  SQSTASQASVLDHLRALFPDMDKQFLEKALEECGNDLDSTIKSLNELRLGSAQNNLGFGA 107

Query: 383 VNTD--------LPTQGIEYNGENVVPSEDLRV-NNLPKNGAEWVELFVNEMTSASDIDD 535
             +D        L +QG+      VV SED     NL  +GAEWVELFV EM SAS++DD
Sbjct: 108 GTSDVGLETKVQLQSQGVAATNGEVVSSEDPSAPKNLSMDGAEWVELFVREMMSASNMDD 167

Query: 536 AKARASRVLEVLEKSIRTQAGAAAADDLHKENMMLKKQMEDLIHENYILKRAVAIQNERL 715
           A+ARASR LEVLEKSI  +A A AA   H+EN+MLK+Q+E L+ EN ILKRAV+IQ+ER 
Sbjct: 168 ARARASRALEVLEKSICARASAEAAQSFHQENLMLKEQVEALLQENIILKRAVSIQHERQ 227

Query: 716 KEADNKNQELQSLKQLVSQYQERVSTLEVNNFTLAMHLKQAQQTSPIPGRFHPDVF 883
           KE++ +NQELQ LKQ+V+QYQE++ TLEVNN+ L+MHL+QAQQ+S IPG FHPDVF
Sbjct: 228 KESEERNQELQHLKQVVTQYQEQLRTLEVNNYALSMHLRQAQQSSSIPGHFHPDVF 283


>ref|XP_003633082.1| PREDICTED: uncharacterized protein LOC100250952 isoform 2 [Vitis
           vinifera]
          Length = 276

 Score =  268 bits (686), Expect = 1e-69
 Identities = 153/289 (52%), Positives = 191/289 (66%), Gaps = 3/289 (1%)
 Frame = +2

Query: 26  MSAIVCGKRSFFEELPTTPAALXXXXXXXXXXXXPNRXXXXXXXXXXXXXXXXXLINFQQ 205
           MSAIVCGKRSFFE+LPTTP                 R                   +  Q
Sbjct: 1   MSAIVCGKRSFFEDLPTTPPV-------------SKRIRCSSSSPVRFSPPRSISASPSQ 47

Query: 206 SDNNGPSSPALAHLQTMFPEMDIKLLEKALNESEN-LDSAIKSLNELRLGSVERNSTSAA 382
           S +    +  L HL+ +FP+MD + LEKAL E  N LDS IKSLNELRLGS + N    A
Sbjct: 48  SQSTASQASVLDHLRALFPDMDKQFLEKALEECGNDLDSTIKSLNELRLGSAQNNLGFGA 107

Query: 383 VNTDLPTQG-IEYNGENVVPSEDLRV-NNLPKNGAEWVELFVNEMTSASDIDDAKARASR 556
             +D+  +  ++   + VV SED     NL  +GAEWVELFV EM SAS++DDA+ARASR
Sbjct: 108 GTSDVGLETKVQLQSQEVVSSEDPSAPKNLSMDGAEWVELFVREMMSASNMDDARARASR 167

Query: 557 VLEVLEKSIRTQAGAAAADDLHKENMMLKKQMEDLIHENYILKRAVAIQNERLKEADNKN 736
            LEVLEKSI  +A A AA   H+EN+MLK+Q+E L+ EN ILKRAV+IQ+ER KE++ +N
Sbjct: 168 ALEVLEKSICARASAEAAQSFHQENLMLKEQVEALLQENIILKRAVSIQHERQKESEERN 227

Query: 737 QELQSLKQLVSQYQERVSTLEVNNFTLAMHLKQAQQTSPIPGRFHPDVF 883
           QELQ LKQ+V+QYQE++ TLEVNN+ L+MHL+QAQQ+S IPG FHPDVF
Sbjct: 228 QELQHLKQVVTQYQEQLRTLEVNNYALSMHLRQAQQSSSIPGHFHPDVF 276


>ref|XP_004139294.1| PREDICTED: uncharacterized protein LOC101217268 [Cucumis sativus]
          Length = 278

 Score =  261 bits (666), Expect = 3e-67
 Identities = 147/290 (50%), Positives = 196/290 (67%), Gaps = 4/290 (1%)
 Frame = +2

Query: 26  MSAIVCGKRSFFEELPTTPAALXXXXXXXXXXXXPNRXXXXXXXXXXXXXXXXXLINFQQ 205
           MSAIVCGKRS FE+LPT P +               R                  ++   
Sbjct: 1   MSAIVCGKRSLFEDLPTPPVSKRI------------RCSSSSPVRFSPPRSSNHSVSPFP 48

Query: 206 SDNNGPSSPALAHLQTMFPEMDIKLLEKALNE-SENLDSAIKSLNELRLGSVERNSTSAA 382
             ++  S+  + +L+ +FP+MD +LLE+AL E  ++LD AI+SLN+L LG  +RN  SA+
Sbjct: 49  QTSSSQSAYLVDYLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGSAS 108

Query: 383 VNTDLPTQGI---EYNGENVVPSEDLRVNNLPKNGAEWVELFVNEMTSASDIDDAKARAS 553
            ++D+  +     +  GE  +  +     NLP NGAEWV+LFVNEMTSAS++DDA++RAS
Sbjct: 109 NSSDVALEANVQPQSQGEAAIAEDATASENLPTNGAEWVDLFVNEMTSASNMDDARSRAS 168

Query: 554 RVLEVLEKSIRTQAGAAAADDLHKENMMLKKQMEDLIHENYILKRAVAIQNERLKEADNK 733
           RVLEVLEKSI  +A A AA++ H+EN ML++Q+E LI EN ILKRAV+IQ+ER KE + +
Sbjct: 169 RVLEVLEKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEFEGR 228

Query: 734 NQELQSLKQLVSQYQERVSTLEVNNFTLAMHLKQAQQTSPIPGRFHPDVF 883
           NQELQ LK+LVSQYQE++ TLEVNN+ L +HLKQAQQ+S IPGRFHPDVF
Sbjct: 229 NQELQQLKELVSQYQEQLKTLEVNNYALTVHLKQAQQSSSIPGRFHPDVF 278


>gb|ABK93674.1| unknown [Populus trichocarpa]
          Length = 286

 Score =  261 bits (666), Expect = 3e-67
 Identities = 151/293 (51%), Positives = 195/293 (66%), Gaps = 7/293 (2%)
 Frame = +2

Query: 26  MSAIVCGKRSFFEELPTTPAALXXXXXXXXXXXXPNRXXXXXXXXXXXXXXXXXLINFQQ 205
           MSAIVCGKRSFFEEL  T   +            P R                   +F  
Sbjct: 1   MSAIVCGKRSFFEELTVTSPPVSKRIRCSSSS--PVRFSPPRSNTLASNPP-----SFNF 53

Query: 206 SDNNGPSSPALAHLQTMFPEMDIKLLEKALNE-SENLDSAIKSLNELRLGSVERNSTSAA 382
             ++  SS  +  L  +FP+MD +L+EK L E  ++LDSAI+SLN+LRLGS E  S +A 
Sbjct: 54  GSSSSSSSTLIEQLAAIFPDMDKQLIEKVLEECGDDLDSAIRSLNDLRLGSAENFSAAAD 113

Query: 383 VN-----TDLPTQGIEYNGENVVPSEDLRVN-NLPKNGAEWVELFVNEMTSASDIDDAKA 544
            +     +++P QG+   G    P+EDL  + +L  +GAEWVELFV EM SAS+IDDA+A
Sbjct: 114 KSDVIDESNVPAQGVATTGAEAPPTEDLSASAHLSLDGAEWVELFVREMMSASNIDDARA 173

Query: 545 RASRVLEVLEKSIRTQAGAAAADDLHKENMMLKKQMEDLIHENYILKRAVAIQNERLKEA 724
           RASR LEVLEKSI  +AGA A  + H+E+M+LK+Q++ LI EN ILKRAV+IQ+ER KE 
Sbjct: 174 RASRALEVLEKSICARAGAEAVKNFHQEHMILKEQVQALIQENTILKRAVSIQHERQKEY 233

Query: 725 DNKNQELQSLKQLVSQYQERVSTLEVNNFTLAMHLKQAQQTSPIPGRFHPDVF 883
           + +NQE+Q LKQLVSQYQ+++ TLEVNN+ L +HLKQAQQ+S IPGRFHPDVF
Sbjct: 234 EERNQEMQQLKQLVSQYQDQLRTLEVNNYALTLHLKQAQQSSSIPGRFHPDVF 286


>ref|XP_002308974.1| predicted protein [Populus trichocarpa] gi|222854950|gb|EEE92497.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  256 bits (654), Expect = 7e-66
 Identities = 155/288 (53%), Positives = 191/288 (66%), Gaps = 2/288 (0%)
 Frame = +2

Query: 26  MSAIVCGKRSFFEELPTTPAALXXXXXXXXXXXXPNRXXXXXXXXXXXXXXXXXLINFQQ 205
           MSAIVCGKRSFFEEL  T   +            P R                   +F  
Sbjct: 1   MSAIVCGKRSFFEELTVTSPPVSKRIRCSSSS--PVRFSPPRSNTIASNPA-----SFNF 53

Query: 206 SDNNGPSSPALAHLQTMFPEMDIKLLEKALNE-SENLDSAIKSLNELRLGSVERNSTSAA 382
           S ++  SS  +  L  +FP+MD +LLEKAL E  ++LD AI+SLNELRL SVE N ++AA
Sbjct: 54  SSSSSSSSAFVEQLAAIFPDMDKQLLEKALEECGDDLDLAIRSLNELRLASVE-NFSAAA 112

Query: 383 VNTDLPTQGIEYNGENVVPSEDLRVNNL-PKNGAEWVELFVNEMTSASDIDDAKARASRV 559
           V +D+  +      +   P+ED   + L   +G EWVELFV EM SAS+IDDA+ARASR 
Sbjct: 113 VKSDVMDKANVPPQDAEAPTEDPSASALLSMDGMEWVELFVREMMSASNIDDARARASRA 172

Query: 560 LEVLEKSIRTQAGAAAADDLHKENMMLKKQMEDLIHENYILKRAVAIQNERLKEADNKNQ 739
           LE LEKSI T+AGA AA   H+ENMMLK+QM+ LI EN ILKRAV+IQ+ER KE +  +Q
Sbjct: 173 LEALEKSICTRAGAEAAKSFHQENMMLKEQMQALIQENTILKRAVSIQHERQKEFEESSQ 232

Query: 740 ELQSLKQLVSQYQERVSTLEVNNFTLAMHLKQAQQTSPIPGRFHPDVF 883
           ELQ LKQLVSQYQ+++ TLEVNN+ L +HLKQAQQ+S IPGRFHPDVF
Sbjct: 233 ELQQLKQLVSQYQDQLRTLEVNNYALTLHLKQAQQSSSIPGRFHPDVF 280


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