BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006561
         (2801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulga...   103   2e-19
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    95   9e-17
emb|CCA66035.1| hypothetical protein [Beta vulgaris subsp. vulga...    95   1e-16
gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]         94   2e-16
emb|CCA66049.1| hypothetical protein [Beta vulgaris subsp. vulga...    94   3e-16

>emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 488

 Score =  103 bits (258), Expect = 2e-19
 Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 2/243 (0%)
 Frame = +2

Query: 233 EELQQNMFNLFFKKKAQRVIELDCINGPD-QVNGPLTLVGKLYGGHKLQLEVLSAEVHRI 409
           +EL ++   L   ++   V++L  +   +      L LVGK+     + L+ L   + +I
Sbjct: 3   DELVESCRRLRIVEEENEVVDLGAVESTNLTAKTSLMLVGKVLSTRAVNLDALKRVMTQI 62

Query: 410 WQTKYEICLEMVDRDHIQITFEEEKERAHVLENGPWNIHGYILSLKEWRGSHRMEDYNFD 589
           W     + +  +D +     F   K++A +L+  PW     +L + E  G  +  D   +
Sbjct: 63  WSLNSNMVVRAIDSNSFIFQFFHWKDKAKILDGRPWLFDQKLLVIDEILGDTQPSDVVLE 122

Query: 590 LVKFWVQIWDLPKVRINQANVRKIGAELGEVCEVDLSCPPDFN-QPVARVKIEMDIKERL 766
              FWV+I++LP    +   VR I   LG V EVD+    DF  +   RVK+E++I + L
Sbjct: 123 TSPFWVRIYNLPFNCRSDTEVRAIAGGLGPVLEVDID---DFGLERFCRVKVELNIFKPL 179

Query: 767 TKEQNIKLETGDSLVVRFKYEKLEIFCYFCGIIGHDQYNCRIRAQYRYDISQTGGTAAVI 946
            + Q I+ + G    + +KYE+L  FC+ CG++GH   +C       ++     G     
Sbjct: 180 RRRQRIRRKDGAVASIDYKYERLPHFCFRCGVLGHGDKDCNAEVPEEWEKEMGWGQWLKA 239

Query: 947 KPF 955
            P+
Sbjct: 240 SPY 242


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1750

 Score = 95.1 bits (235), Expect = 9e-17
 Identities = 51/185 (27%), Positives = 93/185 (50%)
 Frame = +2

Query: 338 TLVGKLYGGHKLQLEVLSAEVHRIWQTKYEICLEMVDRDHIQITFEEEKERAHVLENGPW 517
           +LV       K  L  L  ++ R+W         ++D+  +Q  F+ E+    VL  GPW
Sbjct: 38  SLVVTTVNPRKQNLRALIGQMPRVWGFPDSCVGRIIDKGRVQFKFQSEEAMNLVLRRGPW 97

Query: 518 NIHGYILSLKEWRGSHRMEDYNFDLVKFWVQIWDLPKVRINQANVRKIGAELGEVCEVDL 697
           + + ++LS+  W  +  + +    ++ FWVQI  +P + +  A  R +G  LG V +VD 
Sbjct: 98  SFNDWMLSIHRWYPN--LSEAEMKIIPFWVQITGIPLLFLTNAMARCVGNRLGHVADVDF 155

Query: 698 SCPPDFNQPVARVKIEMDIKERLTKEQNIKLETGDSLVVRFKYEKLEIFCYFCGIIGHDQ 877
               +    V RV+I  ++ + L  ++N +   G++ V++F++E+L  FC  CG + HD 
Sbjct: 156 DENSNHTGFV-RVRINWNLDDPLRFQRNFQFADGENTVIKFRFERLRNFCTKCGSLKHDI 214

Query: 878 YNCRI 892
             C +
Sbjct: 215 KVCTL 219


>emb|CCA66035.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 465

 Score = 94.7 bits (234), Expect = 1e-16
 Identities = 43/191 (22%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
 Frame = +2

Query: 317 DQVNGPLTLVGKLYGGHKLQLEVLSAEVHRIWQTKYEICLEMVDRDHIQITFEEEKERAH 496
           D+    L LV ++     +     +  +  IWQ K+++ ++ + ++   + F   +++  
Sbjct: 56  DEARTELGLVIRICTNRHVNQNAFTTTMKNIWQAKHDMDIKNIGKNLYVVQFYHWRDKHR 115

Query: 497 VLENGPWNIHGYILSLKEWRGSHRMEDYNFDLVKFWVQIWDLP-KVRINQANVRKIGAEL 673
           V+E  PW+   +++ + + +G+ +  D        W +++DLP K R+N  NV+ IG ++
Sbjct: 116 VMEGQPWHFDKHVILMSDIKGNCKPSDIQLWEFPIWARVYDLPFKGRLNINNVKAIGNKI 175

Query: 674 GEVCEVDLSCPPDFNQPVARVKIEMDIKERLTKEQNIKLETGDSLVVRFKYEKLEIFCYF 853
           G    +D S     ++ + R+++  D+++ L+    +++++G+  +   KYE+  +FC++
Sbjct: 176 GSFITMDKSGAMGIDKSI-RIRVMHDVRKPLSSSIKVRMKSGEEDIFTVKYERPPLFCFY 234

Query: 854 CGIIGHDQYNC 886
           CG +GH   +C
Sbjct: 235 CGKVGHGTKDC 245


>gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
          Length = 2367

 Score = 94.0 bits (232), Expect = 2e-16
 Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 3/205 (1%)
 Frame = +2

Query: 290 IELDCINGPDQVNGPLTLVGKLYGGHKLQLEVLSAEVHRIWQTKYEICLEMVDRDHIQIT 469
           +E++      Q  G  T++ + Y         L  ++ R W+ + E+  + +  +   ++
Sbjct: 341 VEIEIEENEVQKAGQWTILARFYSLKFPNQSALFEDMRRAWRLRAEMSYKSLKDNLFIVS 400

Query: 470 FEEEKERAHVLENGPWNIHGYILSLKEWRGSHRMEDYNFDLVKFWVQIWDLPKVRINQAN 649
           F  E +   VL+  PW   G  L + E+ G       N D V  WV+I+DLP V +N+A 
Sbjct: 401 FNAEGDYNFVLQGDPWLHRGDALLVAEFNGLLNPSMVNLDTVPIWVRIYDLPLVMMNRAR 460

Query: 650 VRKIGAELGEVCEVDLSCPPDFNQPVARVKIEMDIKERLTKEQNIKLET-GDSLVVRF-- 820
               G+++G+V EVD+           R+++++ +   L +   IK++  G     RF  
Sbjct: 461 GELYGSKMGKVREVDVQEDGCNKHDFFRIRVDLPVNRPLRRMLAIKIKVQGKEETRRFHL 520

Query: 821 KYEKLEIFCYFCGIIGHDQYNCRIR 895
           +YE++  FC+FCG IGH    C  R
Sbjct: 521 RYERVPHFCFFCGFIGHSDKECEKR 545


>emb|CCA66049.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 465

 Score = 93.6 bits (231), Expect = 3e-16
 Identities = 49/184 (26%), Positives = 93/184 (50%)
 Frame = +2

Query: 335 LTLVGKLYGGHKLQLEVLSAEVHRIWQTKYEICLEMVDRDHIQITFEEEKERAHVLENGP 514
           L+L+GK+        + L   +++IW         +++ D   + F  ++++  V+   P
Sbjct: 38  LSLIGKVVTVRSFNFDALKRTLNQIWSISKGAIFRIIENDLFVVQFACKRDKEKVMAGRP 97

Query: 515 WNIHGYILSLKEWRGSHRMEDYNFDLVKFWVQIWDLPKVRINQANVRKIGAELGEVCEVD 694
           W+    ++ L+E     +  +       FWV++++LP    ++ ++R IG  +G+V EVD
Sbjct: 98  WSFDQSLVLLQEIDADVQPSNVRLTHSPFWVRVYNLPMRCRSEQHIRMIGGCIGDVLEVD 157

Query: 695 LSCPPDFNQPVARVKIEMDIKERLTKEQNIKLETGDSLVVRFKYEKLEIFCYFCGIIGHD 874
                      AR+++ +DI + L + Q   L+ G S +V  KYE+L  FC+ CG+IGH 
Sbjct: 158 TH--EILWDKSARIRVLIDITKPLRRVQRFALKNGVSALVEIKYERLPTFCFLCGVIGHI 215

Query: 875 QYNC 886
             +C
Sbjct: 216 GRDC 219