BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006550
         (1737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281000.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   800   0.0  
ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putat...   776   0.0  
ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|2...   766   0.0  
ref|XP_002329033.1| predicted protein [Populus trichocarpa] gi|2...   762   0.0  
gb|AEL99139.1| ubiquitin carboxyl-terminal hydrolase, partial [S...   757   0.0  

>ref|XP_002281000.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 [Vitis vinifera]
            gi|297743111|emb|CBI35978.3| unnamed protein product
            [Vitis vinifera]
          Length = 479

 Score =  800 bits (2067), Expect = 0.0
 Identities = 393/479 (82%), Positives = 421/479 (87%), Gaps = 3/479 (0%)
 Frame = +1

Query: 10   MPTVSVKWQKEVFQAVEIDTDQPPLVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWAKL 189
            MPTVSVKWQKE F AVEIDT Q P VFKCQL+DLTGVPPERQKIMVKGGLLKDDADW+ L
Sbjct: 1    MPTVSVKWQKEFFPAVEIDTTQSPYVFKCQLFDLTGVPPERQKIMVKGGLLKDDADWSTL 60

Query: 190  GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHTAGMFNLGNTCYMNSTVQ 369
            GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGH+AG+FNLGNTCYMNSTVQ
Sbjct: 61   GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHSAGLFNLGNTCYMNSTVQ 120

Query: 370  CLHSVPELKSALIEYP--GRSNELDQTSHLLTVATRDLFSELDKNVKPVAPMQFWMVLRK 543
            CLHSVPELKSALI+YP  GRSN+LDQ SH+LT ATRDLFSELDKNVKPVAPMQFWMVLRK
Sbjct: 121  CLHSVPELKSALIKYPHSGRSNDLDQPSHMLTCATRDLFSELDKNVKPVAPMQFWMVLRK 180

Query: 544  KYPQFGQMHNGGYMQQDAEECWTQLMYTLSQSLKAPGSRENVEPLKELFGVDLVSRVHCA 723
            KYPQFGQ+HNG +MQQDAEECWTQL+YTLSQSL++PGS EN++ +KELFGV+LVSR+HC 
Sbjct: 181  KYPQFGQLHNGVFMQQDAEECWTQLLYTLSQSLRSPGSSENLDTVKELFGVELVSRMHCE 240

Query: 724  XXXXXXXXXXXXXXLKCHISHEVNHLHEGLKHGLKSELEKVSPSLGRSAVYIKESRINDL 903
                          LKCHISHEVNHLHEGLKHGLKSELEK SPSLGRSA+Y+KESRIN L
Sbjct: 241  ESGEESSETESVYSLKCHISHEVNHLHEGLKHGLKSELEKASPSLGRSAIYVKESRINGL 300

Query: 904  PRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSDELRKKLEVPRKILRDEEGK 1083
            PRYLT+QFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSD+LRKKLE PR+ILRDEEGK
Sbjct: 301  PRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSDDLRKKLEAPRQILRDEEGK 360

Query: 1084 KLGLKPSDKNSGAKDNDVKMIDXXXXXXXXXXXXXXXXQEGIPAKKE-QLTGIYDLVSVL 1260
            KLGL    KNS +KDNDVKM D                 EG+P  KE  LTGIYDLV+VL
Sbjct: 361  KLGL----KNSASKDNDVKMADAEGSSNRSGESSLATSDEGVPTDKETHLTGIYDLVAVL 416

Query: 1261 THKGRSADSGHYVAWVKQENGKWIQFDDNNPIPQREEDITKLSGGGDWHMAYICMYKAR 1437
            THKGRSADSGHYVAWVKQE+GKWI+FDD+NPIPQREEDITKLSGGGDWHMAYICMYKAR
Sbjct: 417  THKGRSADSGHYVAWVKQESGKWIEFDDDNPIPQREEDITKLSGGGDWHMAYICMYKAR 475


>ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223525817|gb|EEF28259.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 482

 Score =  776 bits (2003), Expect = 0.0
 Identities = 377/478 (78%), Positives = 416/478 (87%), Gaps = 2/478 (0%)
 Frame = +1

Query: 10   MPTVSVKWQKEVFQAVEIDTDQPPLVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWAKL 189
            M +VSVKWQK+VF  VEIDT QPP +FKCQL+DLTGVPPERQKIMVKGGLLKDDADWA +
Sbjct: 1    MLSVSVKWQKKVFPQVEIDTSQPPYLFKCQLFDLTGVPPERQKIMVKGGLLKDDADWATV 60

Query: 190  GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHTAGMFNLGNTCYMNSTVQ 369
            GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHTAG+FNLGNTCYMNSTVQ
Sbjct: 61   GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHTAGLFNLGNTCYMNSTVQ 120

Query: 370  CLHSVPELKSALIEYPG-RSNELDQTSHLLTVATRDLFSELDKNVKPVAPMQFWMVLRKK 546
            CLHSVPELKSAL++YP  R N+LDQTSH+LT ATR+LF+ELDK+VKPVAPMQFWMVLRKK
Sbjct: 121  CLHSVPELKSALVKYPSDRRNDLDQTSHMLTTATRELFNELDKSVKPVAPMQFWMVLRKK 180

Query: 547  YPQFGQMHNGGYMQQDAEECWTQLMYTLSQSLKAPGSRENVEPLKELFGVDLVSRVHCAX 726
            YPQFGQ+HNG +MQQDAEECWTQL+YTLSQSL+ P   EN + +KELFG+DLVSR+HC  
Sbjct: 181  YPQFGQLHNGLFMQQDAEECWTQLLYTLSQSLRPPSPSENPDTVKELFGIDLVSRIHCQE 240

Query: 727  XXXXXXXXXXXXXLKCHISHEVNHLHEGLKHGLKSELEKVSPSLGRSAVYIKESRINDLP 906
                         LKCHIS +VNHLHEGLKHGLKSELEK SPSLGRSA+Y+KES INDLP
Sbjct: 241  SGEESSETESVYSLKCHISQDVNHLHEGLKHGLKSELEKASPSLGRSAIYLKESCINDLP 300

Query: 907  RYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSDELRKKLEVPRKILRDEEGKK 1086
            RYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYD CS +LRK+LE PR+ILRDEEG+K
Sbjct: 301  RYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSADLRKQLEAPRQILRDEEGRK 360

Query: 1087 LGLKPSDKNSGAKDNDVKMIDXXXXXXXXXXXXXXXXQEGIPAKK-EQLTGIYDLVSVLT 1263
            LGLK ++K+SG+KDNDVKM D                +EG  + K   LTGIYDLV+VLT
Sbjct: 361  LGLKVNEKSSGSKDNDVKMTDAEGPSSGSGESSKATSEEGESSHKVSSLTGIYDLVAVLT 420

Query: 1264 HKGRSADSGHYVAWVKQENGKWIQFDDNNPIPQREEDITKLSGGGDWHMAYICMYKAR 1437
            HKGRSADSGHYVAWVKQE+GKWI++DD+NPIPQREEDITKLSGGGDWHMAYICMYKAR
Sbjct: 421  HKGRSADSGHYVAWVKQESGKWIEYDDDNPIPQREEDITKLSGGGDWHMAYICMYKAR 478


>ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|222835980|gb|EEE74401.1|
            predicted protein [Populus trichocarpa]
          Length = 482

 Score =  766 bits (1977), Expect = 0.0
 Identities = 374/478 (78%), Positives = 409/478 (85%), Gaps = 2/478 (0%)
 Frame = +1

Query: 10   MPTVSVKWQKEVFQAVEIDTDQPPLVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWAKL 189
            M TVSVKW KEVF  VEIDT QPP VFKCQLYDLTGVPPERQKIMVKGGLLKDDADWA +
Sbjct: 1    MLTVSVKWLKEVFPKVEIDTSQPPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWATV 60

Query: 190  GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHTAGMFNLGNTCYMNSTVQ 369
            GVKEGQK+MMMGTADEIVKAPEKGP+FMEDLPEEEQVVA+GHTAG+FNLGNTCYMNSTVQ
Sbjct: 61   GVKEGQKMMMMGTADEIVKAPEKGPIFMEDLPEEEQVVALGHTAGLFNLGNTCYMNSTVQ 120

Query: 370  CLHSVPELKSALIEYPG-RSNELDQTSHLLTVATRDLFSELDKNVKPVAPMQFWMVLRKK 546
            CLHSVP+LKSAL  YP  +S++LDQTSH+LT ATR+LF+ELDK+VKPVAPMQFWMVLRKK
Sbjct: 121  CLHSVPDLKSALSNYPSQKSSDLDQTSHMLTAATRELFNELDKSVKPVAPMQFWMVLRKK 180

Query: 547  YPQFGQMHNGGYMQQDAEECWTQLMYTLSQSLKAPGSRENVEPLKELFGVDLVSRVHCAX 726
            YPQFGQ+HNG YMQQDAEECWTQL+YTLSQSL++P   +N + +KELFG++LVSRVHC  
Sbjct: 181  YPQFGQLHNGVYMQQDAEECWTQLLYTLSQSLRSPSPSQNPDTIKELFGIELVSRVHCQE 240

Query: 727  XXXXXXXXXXXXXLKCHISHEVNHLHEGLKHGLKSELEKVSPSLGRSAVYIKESRINDLP 906
                         LKCHIS EVNHLHEGLKHGLKSELEK SPSLGRSA+Y+KES IN LP
Sbjct: 241  SGEESSETESVYSLKCHISQEVNHLHEGLKHGLKSELEKASPSLGRSAIYLKESCINALP 300

Query: 907  RYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSDELRKKLEVPRKILRDEEGKK 1086
            RYLTVQFVRFFWKRESNQKAKILRKVDYPL+LDVYD CSD+LRK LE PR+ILRDEEGKK
Sbjct: 301  RYLTVQFVRFFWKRESNQKAKILRKVDYPLQLDVYDFCSDDLRKNLEAPRQILRDEEGKK 360

Query: 1087 LGLKPSDKNSGAKDNDVKMIDXXXXXXXXXXXXXXXXQEGIPAKKE-QLTGIYDLVSVLT 1263
             GLK   K+S +KDND KM D                 EG  + KE  LTGIYDLV+VLT
Sbjct: 361  AGLKAKVKSSSSKDNDAKMTDVEGPSNESVKSSNSTSGEGGSSDKESHLTGIYDLVAVLT 420

Query: 1264 HKGRSADSGHYVAWVKQENGKWIQFDDNNPIPQREEDITKLSGGGDWHMAYICMYKAR 1437
            HKGRSADSGHYVAWVKQE+GKWI++DD+NPIPQREEDITKLSGGGDWHMAYICMYKAR
Sbjct: 421  HKGRSADSGHYVAWVKQESGKWIEYDDDNPIPQREEDITKLSGGGDWHMAYICMYKAR 478


>ref|XP_002329033.1| predicted protein [Populus trichocarpa] gi|222839704|gb|EEE78027.1|
            predicted protein [Populus trichocarpa]
          Length = 486

 Score =  762 bits (1968), Expect = 0.0
 Identities = 372/474 (78%), Positives = 405/474 (85%), Gaps = 1/474 (0%)
 Frame = +1

Query: 19   VSVKWQKEVFQAVEIDTDQPPLVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWAKLGVK 198
            VSVKWQKE+F  VEIDT QPP VFKCQL+ LTGVPPERQKIMVKGGLLKDDA+WA LGVK
Sbjct: 12   VSVKWQKELFPKVEIDTSQPPYVFKCQLHGLTGVPPERQKIMVKGGLLKDDANWATLGVK 71

Query: 199  EGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHTAGMFNLGNTCYMNSTVQCLH 378
            EGQKLMMMGTADEIVK PEKGPVFMEDLPEEEQ+VAVGHTAG+FNLGNTCYMNSTVQCLH
Sbjct: 72   EGQKLMMMGTADEIVKTPEKGPVFMEDLPEEEQMVAVGHTAGLFNLGNTCYMNSTVQCLH 131

Query: 379  SVPELKSALIEYPG-RSNELDQTSHLLTVATRDLFSELDKNVKPVAPMQFWMVLRKKYPQ 555
            SVPELKSAL+ YP  +S++LD TSH+LT ATR+LF+ELDK+VKPVAPMQFWMVLRKKYPQ
Sbjct: 132  SVPELKSALVSYPSQKSSDLDHTSHMLTAATRELFNELDKSVKPVAPMQFWMVLRKKYPQ 191

Query: 556  FGQMHNGGYMQQDAEECWTQLMYTLSQSLKAPGSRENVEPLKELFGVDLVSRVHCAXXXX 735
            FGQ+HNG YMQQDAEECWTQL+YTLSQSL +P   EN + +K LFG++LVSRVHC     
Sbjct: 192  FGQLHNGLYMQQDAEECWTQLLYTLSQSLGSPSFSENPDTIKALFGIELVSRVHCQESSE 251

Query: 736  XXXXXXXXXXLKCHISHEVNHLHEGLKHGLKSELEKVSPSLGRSAVYIKESRINDLPRYL 915
                      LKCHIS EVNHLHEGLKHGLKSELEK SP LGRSA+Y+KESRIN LPRYL
Sbjct: 252  ESSETESVYSLKCHISQEVNHLHEGLKHGLKSELEKASPCLGRSAIYLKESRINALPRYL 311

Query: 916  TVQFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSDELRKKLEVPRKILRDEEGKKLGL 1095
            TVQFVRFFWKRESNQKAKILRKVDYPL+LDVYD CSD+L KKLE PR+ILRDEEGKK GL
Sbjct: 312  TVQFVRFFWKRESNQKAKILRKVDYPLQLDVYDFCSDDLCKKLEAPRQILRDEEGKKAGL 371

Query: 1096 KPSDKNSGAKDNDVKMIDXXXXXXXXXXXXXXXXQEGIPAKKEQLTGIYDLVSVLTHKGR 1275
            K  +K SG+KDNDVKM D                +E    KK  LTGIYDLV+VLTHKGR
Sbjct: 372  KAKEKTSGSKDNDVKMTDVERPSNESGESSKPTSKED---KKSHLTGIYDLVAVLTHKGR 428

Query: 1276 SADSGHYVAWVKQENGKWIQFDDNNPIPQREEDITKLSGGGDWHMAYICMYKAR 1437
            SADSGHYVAWVKQE+GKWI+FDD+NP+PQREEDITKLSGGGDWHMAYICMYKAR
Sbjct: 429  SADSGHYVAWVKQESGKWIEFDDDNPVPQREEDITKLSGGGDWHMAYICMYKAR 482


>gb|AEL99139.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
          Length = 476

 Score =  757 bits (1954), Expect = 0.0
 Identities = 362/475 (76%), Positives = 411/475 (86%), Gaps = 2/475 (0%)
 Frame = +1

Query: 19   VSVKWQKEVFQAVEIDTDQPPLVFKCQLYDLTGVPPERQKIMVKGGLLKDDADWAKLGVK 198
            VSVKWQK+ F  VEID  Q P +FKCQL+DLTGVPPERQKIMVKGGLLKDDADWA +GVK
Sbjct: 1    VSVKWQKKTFP-VEIDATQSPFLFKCQLFDLTGVPPERQKIMVKGGLLKDDADWAVVGVK 59

Query: 199  EGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHTAGMFNLGNTCYMNSTVQCLH 378
            EGQKLMMMGTADEI+KAPEKGPVF+EDLPEEEQ + +G++AG+FNLGNTCYMNST+QCLH
Sbjct: 60   EGQKLMMMGTADEIIKAPEKGPVFVEDLPEEEQALNLGYSAGLFNLGNTCYMNSTLQCLH 119

Query: 379  SVPELKSALIEYP--GRSNELDQTSHLLTVATRDLFSELDKNVKPVAPMQFWMVLRKKYP 552
            SVPELKSAL+EY   GRSN+LDQTSHLLTVAT+DLFS+LDKN KPVAPMQFWMVLRKK+P
Sbjct: 120  SVPELKSALLEYSQSGRSNDLDQTSHLLTVATKDLFSDLDKNAKPVAPMQFWMVLRKKFP 179

Query: 553  QFGQMHNGGYMQQDAEECWTQLMYTLSQSLKAPGSRENVEPLKELFGVDLVSRVHCAXXX 732
            QFGQ+HNG +MQQDAEECWTQL+YTLSQSLK+  + +N+  +K LFGVDL SRV+C    
Sbjct: 180  QFGQLHNGSFMQQDAEECWTQLLYTLSQSLKSSSAGDNLSAVKALFGVDLASRVYCQESG 239

Query: 733  XXXXXXXXXXXLKCHISHEVNHLHEGLKHGLKSELEKVSPSLGRSAVYIKESRINDLPRY 912
                       LKCHISHEVNHLHEGLKHGLKSELEK SP+LGRSA+Y KESRI+ LPRY
Sbjct: 240  EETTEVESTFALKCHISHEVNHLHEGLKHGLKSELEKNSPTLGRSAIYFKESRISGLPRY 299

Query: 913  LTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSDELRKKLEVPRKILRDEEGKKLG 1092
            LT+QFVRFFWKRESNQKAKILRKVDYPLELDV+D CSDEL+KKLE PR+ILRDEEG KLG
Sbjct: 300  LTIQFVRFFWKRESNQKAKILRKVDYPLELDVFDFCSDELKKKLESPRQILRDEEGIKLG 359

Query: 1093 LKPSDKNSGAKDNDVKMIDXXXXXXXXXXXXXXXXQEGIPAKKEQLTGIYDLVSVLTHKG 1272
            LKPS+++S +KD D+KM+D                Q+G+P ++ QLTG+YDLV+VLTHKG
Sbjct: 360  LKPSEQSSSSKDKDIKMVDVEVSSNGCGESSSGTSQDGLPEREAQLTGVYDLVAVLTHKG 419

Query: 1273 RSADSGHYVAWVKQENGKWIQFDDNNPIPQREEDITKLSGGGDWHMAYICMYKAR 1437
            RSADSGHYVAWVKQENGKW+++DD+NPIPQREEDI KLSGGGDWHMAYICMYKAR
Sbjct: 420  RSADSGHYVAWVKQENGKWVEYDDDNPIPQREEDIVKLSGGGDWHMAYICMYKAR 474