BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006548
         (2065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [...   614   e-173
gb|ABK94895.1| unknown [Populus trichocarpa]                          576   e-162
gb|ADL36841.1| TLP domain class transcription factor [Malus x do...   575   e-161
ref|XP_002276906.1| PREDICTED: tubby-like F-box protein 6-like [...   572   e-160
ref|XP_003542914.1| PREDICTED: tubby-like F-box protein 6-like [...   572   e-160

>ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [Vitis vinifera]
          Length = 405

 Score =  614 bits (1583), Expect = e-173
 Identities = 309/405 (76%), Positives = 334/405 (82%), Gaps = 3/405 (0%)
 Frame = -2

Query: 1920 MPLKSIIQDMXXXXXXXXXXXXXXXXXXLVQDGG--VVVVPLLSIDAFKQSCWANMPPEL 1747
            M  KSIIQDM                   ++     VV    + +DA +QSCWANMPPEL
Sbjct: 1    MSFKSIIQDMRGEFGSISRKGFEVKFNYGLRSRSHRVVQDSSMVVDALRQSCWANMPPEL 60

Query: 1746 LRDVLKRIEESECDWPLRKHVVACAGVCRSWRDIVKEIVKLPELSGKFTFPISLKQPGPR 1567
            LRDVL RIE SE  WP RK+VVACAGVCRSWR+I KEIVK PELSGK TFPISLKQPGPR
Sbjct: 61   LRDVLMRIEASESTWPPRKNVVACAGVCRSWREITKEIVKTPELSGKLTFPISLKQPGPR 120

Query: 1566 DALLQCFIKRNRSTQTYHLYLGLTQALTDNGKFLLAACKYRRPTCTDYIISLNADDMSKG 1387
             +LLQC+IKRNRS QTYHLYLGL QA TD+GKFLLAA K RRPTCTDYIISLNADD+SKG
Sbjct: 121  GSLLQCYIKRNRSNQTYHLYLGLNQASTDDGKFLLAARKCRRPTCTDYIISLNADDVSKG 180

Query: 1386 SGTYIGKLRSNFLGTKFVIYDGQPPHAGATGTKSRSTR-LGLKRVSPRVPAGNYAVAHVQ 1210
            S TYIGKLRSNFLGTKF +YD QPP+AGA  +KSRSTR LG ++VSPRVPAGNY VAH+ 
Sbjct: 181  STTYIGKLRSNFLGTKFTVYDAQPPNAGARISKSRSTRRLGSRQVSPRVPAGNYPVAHIS 240

Query: 1209 YELNVLGSRGPRRMLCTMDAIPANAIEPGGVVPTQTEFPLSNPDFFPSLPFFRSKSTRTE 1030
            YELNVLGSRGPRRM C MDAIPANAIEPGGV PTQTEF LSN D FPS PFFRSKS RTE
Sbjct: 241  YELNVLGSRGPRRMQCVMDAIPANAIEPGGVAPTQTEFVLSNVDSFPSFPFFRSKSNRTE 300

Query: 1029 SLSSGPLANPKEGMLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVASPENGLTGQ 850
            SL SGPL+ PK+ MLVLKNKAPRWHEQLQCWCLNF GRVTVASVKNFQLVAS ENG+ GQ
Sbjct: 301  SLHSGPLSGPKDEMLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASAENGVAGQ 360

Query: 849  EQEKVLLQFGKVGKDLFTMDFRYPLSAFQAFAICLSSFDTKIACE 715
            E E V+LQFGKVGKD+FTMD++YP+SAFQAFAICLSSFDTKIACE
Sbjct: 361  EHENVILQFGKVGKDVFTMDYQYPISAFQAFAICLSSFDTKIACE 405


>gb|ABK94895.1| unknown [Populus trichocarpa]
          Length = 392

 Score =  576 bits (1484), Expect = e-162
 Identities = 280/355 (78%), Positives = 306/355 (86%), Gaps = 1/355 (0%)
 Frame = -2

Query: 1776 SCWANMPPELLRDVLKRIEESECDWPLRKHVVACAGVCRSWRDIVKEIVKLPELSGKFTF 1597
            SCWAN+P ELLR+VL RIEESE  WP RK+VVACAGVCRSWRDI KE+VK+PELSGK TF
Sbjct: 38   SCWANLPQELLREVLIRIEESESSWPPRKNVVACAGVCRSWRDITKELVKVPELSGKLTF 97

Query: 1596 PISLKQPGPRDALLQCFIKRNRSTQTYHLYLGLTQALTDNGKFLLAACKYRRPTCTDYII 1417
            PIS+KQPGPRD LLQCFIKR RS QTY LYLGL  ALT++GKFLLAA K RRPTCTDYII
Sbjct: 98   PISVKQPGPRDFLLQCFIKRCRSAQTYRLYLGLNNALTEDGKFLLAARKCRRPTCTDYII 157

Query: 1416 SLNADDMSKGSGTYIGKLRSNFLGTKFVIYDGQPPHAGATGTKSRSTRL-GLKRVSPRVP 1240
            SL+ DDMSKGS  Y+GKLRSNFLGTKF ++DGQPPHAGA  TKSRS+RL  LK+VSPRVP
Sbjct: 158  SLDTDDMSKGSNAYVGKLRSNFLGTKFTVFDGQPPHAGAKMTKSRSSRLVNLKQVSPRVP 217

Query: 1239 AGNYAVAHVQYELNVLGSRGPRRMLCTMDAIPANAIEPGGVVPTQTEFPLSNPDFFPSLP 1060
             GNY VA + YELNVLGSRGPRRM C MDAIPA+AIEPGG+ PTQTEF   N DF PSLP
Sbjct: 218  TGNYPVASISYELNVLGSRGPRRMHCIMDAIPASAIEPGGIAPTQTEFSHHNVDFLPSLP 277

Query: 1059 FFRSKSTRTESLSSGPLANPKEGMLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLV 880
            FFRSKS+R ES  SG L++ +E  LVLKNKAPRWHEQLQCWCLNF GRVTVASVKNFQLV
Sbjct: 278  FFRSKSSRVESFQSGSLSSQRERALVLKNKAPRWHEQLQCWCLNFHGRVTVASVKNFQLV 337

Query: 879  ASPENGLTGQEQEKVLLQFGKVGKDLFTMDFRYPLSAFQAFAICLSSFDTKIACE 715
             SPENG  G E E ++LQFGKVGKDLFTMD+RYP+SAFQAFA+CLSSFDTKIACE
Sbjct: 338  VSPENGPAGPEHENIILQFGKVGKDLFTMDYRYPISAFQAFALCLSSFDTKIACE 392


>gb|ADL36841.1| TLP domain class transcription factor [Malus x domestica]
          Length = 401

 Score =  575 bits (1481), Expect = e-161
 Identities = 284/402 (70%), Positives = 325/402 (80%)
 Frame = -2

Query: 1920 MPLKSIIQDMXXXXXXXXXXXXXXXXXXLVQDGGVVVVPLLSIDAFKQSCWANMPPELLR 1741
            M  KS+IQDM                    +   VV      +DA KQSCWANMPPELLR
Sbjct: 1    MSFKSMIQDMKGELGSISRKSFDVKFGMRSRSQRVVQDTSFRVDALKQSCWANMPPELLR 60

Query: 1740 DVLKRIEESECDWPLRKHVVACAGVCRSWRDIVKEIVKLPELSGKFTFPISLKQPGPRDA 1561
            DVL RIE S+  WP RK+VV CAGVCR+WR+I+KEIVK PE+SGK TFPISLKQPGPR++
Sbjct: 61   DVLMRIEASDDTWPPRKNVVCCAGVCRNWREIMKEIVKSPEVSGKLTFPISLKQPGPRNS 120

Query: 1560 LLQCFIKRNRSTQTYHLYLGLTQALTDNGKFLLAACKYRRPTCTDYIISLNADDMSKGSG 1381
            LLQC+IKR+RS QTY+L+LGL+QA TD+GKFLLAA K RRPTCTDYIISLNA+ +SKG+ 
Sbjct: 121  LLQCYIKRSRSNQTYYLFLGLSQASTDDGKFLLAAKKCRRPTCTDYIISLNAEVVSKGNS 180

Query: 1380 TYIGKLRSNFLGTKFVIYDGQPPHAGATGTKSRSTRLGLKRVSPRVPAGNYAVAHVQYEL 1201
             ++GKLRSNFLGTKF IYD QP ++GA  TK RSTRL + +VSPRVPAGNY VAH+ YEL
Sbjct: 181  AFVGKLRSNFLGTKFTIYDAQPTNSGAKVTKCRSTRL-VNKVSPRVPAGNYPVAHIAYEL 239

Query: 1200 NVLGSRGPRRMLCTMDAIPANAIEPGGVVPTQTEFPLSNPDFFPSLPFFRSKSTRTESLS 1021
            NV+G+RGPRRM C MD+IPA A+EPGGV PTQTEF  SN D FPS+PFFRSKSTRTE+  
Sbjct: 240  NVMGARGPRRMQCVMDSIPARAVEPGGVAPTQTEFMHSNTDSFPSVPFFRSKSTRTENFP 299

Query: 1020 SGPLANPKEGMLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVASPENGLTGQEQE 841
            S   +   EGMLVL+NKAPRWHEQLQCWCLNF GRVTVASVKNFQLV+SPENG+ GQE E
Sbjct: 300  SPLESGENEGMLVLRNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVSSPENGVAGQEHE 359

Query: 840  KVLLQFGKVGKDLFTMDFRYPLSAFQAFAICLSSFDTKIACE 715
             V+LQFGKVGKD+FTMD+RYP+SAFQAFAICLSSFDTKIACE
Sbjct: 360  NVILQFGKVGKDVFTMDYRYPISAFQAFAICLSSFDTKIACE 401


>ref|XP_002276906.1| PREDICTED: tubby-like F-box protein 6-like [Vitis vinifera]
          Length = 374

 Score =  572 bits (1475), Expect = e-160
 Identities = 276/361 (76%), Positives = 313/361 (86%), Gaps = 1/361 (0%)
 Frame = -2

Query: 1794 IDAFKQSCWANMPPELLRDVLKRIEESECDWPLRKHVVACAGVCRSWRDIVKEIVKLPEL 1615
            +D  +QSCW+ MP ELLR+VL RIE S+  WP RK+VVACAGVC+SWR I +E+VK PE+
Sbjct: 14   VDGLEQSCWSQMPEELLREVLIRIEASDTTWPSRKNVVACAGVCKSWRRITQELVKTPEV 73

Query: 1614 SGKFTFPISLKQPGPRDALLQCFIKRNRSTQTYHLYLGLTQALTDNGKFLLAACKYRRPT 1435
            S   TFPIS+KQPGPR++LL+CFIKRNRS QTY+LYL LT ALT++GKFLLAA KYRR T
Sbjct: 74   SASLTFPISVKQPGPRESLLKCFIKRNRSAQTYYLYLSLTNALTEDGKFLLAARKYRRTT 133

Query: 1434 CTDYIISLNADDMSKGSGTYIGKLRSNFLGTKFVIYDGQPPHAGATGTKSRSTRL-GLKR 1258
            CTDYIISL ADDMSKGS TYIGKLRSNFLGTKF +YDGQPPH+GA   ++RSTRL GLK+
Sbjct: 134  CTDYIISLYADDMSKGSSTYIGKLRSNFLGTKFTVYDGQPPHSGAKIMRNRSTRLVGLKQ 193

Query: 1257 VSPRVPAGNYAVAHVQYELNVLGSRGPRRMLCTMDAIPANAIEPGGVVPTQTEFPLSNPD 1078
            VSPRVPAG+Y VAH+ YE+NVLGSRGPRRM C+MD+IPA+AIEPGGV PTQTE  LSNPD
Sbjct: 194  VSPRVPAGSYPVAHISYEVNVLGSRGPRRMQCSMDSIPASAIEPGGVTPTQTEIRLSNPD 253

Query: 1077 FFPSLPFFRSKSTRTESLSSGPLANPKEGMLVLKNKAPRWHEQLQCWCLNFRGRVTVASV 898
             FPS  FFRSKS   E+  S PLA+ K+G LVLKNKAPRWHEQLQCWCLNF GRVTVASV
Sbjct: 254  VFPSFSFFRSKSHSVENSLSEPLADKKDGALVLKNKAPRWHEQLQCWCLNFHGRVTVASV 313

Query: 897  KNFQLVASPENGLTGQEQEKVLLQFGKVGKDLFTMDFRYPLSAFQAFAICLSSFDTKIAC 718
            KNFQLVASPE+G  GQ+ EK++LQFGKVGKDLFTMD+RYP+SAFQAFAICLSSFDTKIAC
Sbjct: 314  KNFQLVASPEDGPAGQQHEKIILQFGKVGKDLFTMDYRYPISAFQAFAICLSSFDTKIAC 373

Query: 717  E 715
            E
Sbjct: 374  E 374


>ref|XP_003542914.1| PREDICTED: tubby-like F-box protein 6-like [Glycine max]
          Length = 389

 Score =  572 bits (1474), Expect = e-160
 Identities = 278/360 (77%), Positives = 307/360 (85%), Gaps = 1/360 (0%)
 Frame = -2

Query: 1791 DAFKQSCWANMPPELLRDVLKRIEESECDWPLRKHVVACAGVCRSWRDIVKEIVKLPELS 1612
            D+ +QSCWANMP ELLR+VL RIE SE  WP RK VV+CAGVCRSWR I K+IVK PELS
Sbjct: 30   DSMRQSCWANMPQELLREVLLRIEASEDTWPPRKSVVSCAGVCRSWRHITKDIVKTPELS 89

Query: 1611 GKFTFPISLKQPGPRDALLQCFIKRNRSTQTYHLYLGLTQALTDNGKFLLAACKYRRPTC 1432
             K TFPIS+KQPGPR+ LL+CFIKRNRSTQTY+L+L LT  L ++GKFLLAA K RRPTC
Sbjct: 90   SKITFPISVKQPGPRENLLRCFIKRNRSTQTYYLFLSLTSTLAEDGKFLLAARKCRRPTC 149

Query: 1431 TDYIISLNADDMSKGSGTYIGKLRSNFLGTKFVIYDGQPPHAGATGTKSRSTRL-GLKRV 1255
            TDYIISL+ADDMSKGS +Y+GKLRSNFLGTKF IYD Q PH GA   KSRSTRL  LK+V
Sbjct: 150  TDYIISLDADDMSKGSNSYVGKLRSNFLGTKFTIYDSQLPHTGAKIMKSRSTRLVNLKQV 209

Query: 1254 SPRVPAGNYAVAHVQYELNVLGSRGPRRMLCTMDAIPANAIEPGGVVPTQTEFPLSNPDF 1075
            SP+VP GNY VAH+ YELNVLGSRGPRRM C MD+IPA AIEPGGV PTQTEF L+N D 
Sbjct: 210  SPKVPTGNYPVAHISYELNVLGSRGPRRMHCVMDSIPATAIEPGGVAPTQTEFSLNNIDM 269

Query: 1074 FPSLPFFRSKSTRTESLSSGPLANPKEGMLVLKNKAPRWHEQLQCWCLNFRGRVTVASVK 895
            FPS PFFRSKS R E+  SGPL + K+GMLVLKNKAPRWHEQLQCWCLNF GRVT+ASVK
Sbjct: 270  FPSFPFFRSKSNRAENSMSGPLVDQKDGMLVLKNKAPRWHEQLQCWCLNFHGRVTIASVK 329

Query: 894  NFQLVASPENGLTGQEQEKVLLQFGKVGKDLFTMDFRYPLSAFQAFAICLSSFDTKIACE 715
            NFQLVAS ENG  G E +K++LQFGKVGKDLFTMD+RYP+SAFQAFAICLSSFDTKIACE
Sbjct: 330  NFQLVASAENGPAGPEHDKIILQFGKVGKDLFTMDYRYPISAFQAFAICLSSFDTKIACE 389