BLASTX nr result

ID: Coptis24_contig00006541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006541
         (1642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283244.1| PREDICTED: G-box-binding factor 1 [Vitis vin...   297   6e-78
ref|XP_002272761.1| PREDICTED: G-box-binding factor 1 [Vitis vin...   290   6e-76
ref|XP_002525106.1| G-box-binding factor, putative [Ricinus comm...   277   5e-72
ref|XP_004143501.1| PREDICTED: G-box-binding factor 1-like [Cucu...   275   2e-71
gb|ABK96172.1| unknown [Populus trichocarpa]                          275   2e-71

>ref|XP_002283244.1| PREDICTED: G-box-binding factor 1 [Vitis vinifera]
            gi|302142457|emb|CBI19660.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  297 bits (760), Expect = 6e-78
 Identities = 179/378 (47%), Positives = 216/378 (57%), Gaps = 14/378 (3%)
 Frame = -1

Query: 1396 MGSGEETTPAAKPSGPTASSQETPTTSAYPDWPGPMQAYYGAGATQPPFFAPTVASPTPY 1217
            MG GEE+TP  K S P AS+QETP+T +YPDW   MQAYYGAGAT PPFF   VA P+P+
Sbjct: 1    MGDGEESTPP-KSSKPPASTQETPSTPSYPDWSTSMQAYYGAGATPPPFFPSPVAPPSPH 59

Query: 1216 PYMWGGQH-LVSPYGTPIPYPALYPHAGLYPHPNMATAQGAPVTTG----KTEGKETPAK 1052
            PY+WGGQH ++ PYGTP+PYPALYP   LY HP+MATAQG  +T      KT   + PA 
Sbjct: 60   PYLWGGQHPMMPPYGTPLPYPALYPRGALYAHPSMATAQGVALTNTDMEVKTPDGKDPAS 119

Query: 1051 KVKS---SENIGLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENISRKDILANK 881
              KS   S N+GL+                                  +  + +   A K
Sbjct: 120  IKKSKAASGNMGLISGKSGESGKAASVSGNDGASQSGESGSEASSDATDENANQASSAVK 179

Query: 880  NRSFDKMLEDGANAHNPAHHSSLNGKGEPSANLPIPLPGNPAGDMAATNLNIGMDLWSAS 701
             RSF+  L DG+NA   +      G    S      +PG P   M  T+LNIGMDLW+AS
Sbjct: 180  KRSFN--LADGSNAKGNSAAQYTGGNHSAS------VPGKPVVPMPTTSLNIGMDLWNAS 231

Query: 700  HVGAMPSRVRPNASGVLPAA------GHEGMVPDHLFGQDEREMKRQRRKLSNRESARRS 539
              G  P + RP +SG  P        G EGM+ DH + QDERE+KRQRRK SNRESARRS
Sbjct: 232  PAGGTPMKTRPQSSGASPQVASATIVGREGMLQDHQWIQDERELKRQRRKQSNRESARRS 291

Query: 538  RLRKQAECEELQVKVENLSNENQNXXXXXXXXXXXXXXLTNDNASLLGELTQLYGEDAVS 359
            RLRKQAECEELQ KVE LSNEN                LT++N S++ ELTQLYG +A S
Sbjct: 292  RLRKQAECEELQSKVEILSNENHVLREELHRLAEQCEKLTSENNSIMEELTQLYGPEATS 351

Query: 358  RLKVMNGNTSLSPSVNGD 305
             L+  N N  L P +NG+
Sbjct: 352  SLQDNNHNLVLHP-INGE 368


>ref|XP_002272761.1| PREDICTED: G-box-binding factor 1 [Vitis vinifera]
            gi|297735196|emb|CBI17558.3| unnamed protein product
            [Vitis vinifera]
          Length = 364

 Score =  290 bits (743), Expect = 6e-76
 Identities = 180/377 (47%), Positives = 221/377 (58%), Gaps = 13/377 (3%)
 Frame = -1

Query: 1396 MGSGEETTPAAKPSGPTASSQETPTTSAYPDWPGPMQAYYGAGATQPPFFAPTVASPTPY 1217
            MG+GE+TTP  KPS PT+S+QE PTT +YP+W   MQAYYG GAT PPFFAP+VASPTP+
Sbjct: 1    MGAGEDTTPT-KPSKPTSSAQEMPTTPSYPEWSSSMQAYYGPGATPPPFFAPSVASPTPH 59

Query: 1216 PYMWGGQH-LVSPYGTPIPYPALYPHAGLYPHPNMATAQGA----PVTTGK-TEGKETPA 1055
            PY+WG QH L+ PYGTP+PY ALYP  G+Y HPN+ATA  A    P   GK  EGK+  +
Sbjct: 60   PYLWGSQHPLIPPYGTPVPYSALYPPGGVYAHPNLATAPSAAHLNPELEGKGPEGKDKAS 119

Query: 1054 KKVKSSENIGLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENISRKDILANKNR 875
             K KS    G                                    EN ++++  ++K  
Sbjct: 120  AK-KSKGTSGNTVKGGESGKAASGSGNDGASPSAESGSEGSSDASDENTNQQEFASSKKG 178

Query: 874  SFDKMLEDGANAHNPAHHSSLNGKGEPSANLPIPLPGNPAGDMAATNLNIGMDLWSASHV 695
            SF++ML D ANA N    +S+             +PG P   M ATNLNIGMDLWSAS  
Sbjct: 179  SFNQMLAD-ANAQNNISGTSVQAS----------VPGKPVISMPATNLNIGMDLWSASPG 227

Query: 694  GAMPSRVRPNASG----VLPAA--GHEGMVPDHLFGQDEREMKRQRRKLSNRESARRSRL 533
            G+  +++RPN SG    V PAA  G EG++PD    QDERE+KRQ+RK SNRESARRSRL
Sbjct: 228  GSGATKLRPNPSGISSSVAPAAMVGREGVMPDQWI-QDERELKRQKRKQSNRESARRSRL 286

Query: 532  RKQAECEELQVKVENLSNENQNXXXXXXXXXXXXXXLTNDNASLLGELTQLYGEDAV-SR 356
            RKQAECEELQ KVE LS EN                LT++N S+  ELT++ G DAV + 
Sbjct: 287  RKQAECEELQAKVETLSTENTALRDELQRLSEECEKLTSENNSIKEELTRVCGADAVAAN 346

Query: 355  LKVMNGNTSLSPSVNGD 305
            LK  N     S  V G+
Sbjct: 347  LKEKNPTQLQSQGVEGN 363


>ref|XP_002525106.1| G-box-binding factor, putative [Ricinus communis]
            gi|223535565|gb|EEF37233.1| G-box-binding factor,
            putative [Ricinus communis]
          Length = 350

 Score =  277 bits (709), Expect = 5e-72
 Identities = 173/360 (48%), Positives = 210/360 (58%), Gaps = 8/360 (2%)
 Frame = -1

Query: 1396 MGSGEETTPAAKPSGPTASSQETPTTSAYPDWPGPMQAYYGAGATQPPFFAPTVASPTPY 1217
            MG+GEE+TPA KPS P+ S+QE P T AYPDW   MQAYYGAGAT PPFFA TV SPTP+
Sbjct: 1    MGTGEESTPA-KPSKPS-SAQEIPPTPAYPDWSNSMQAYYGAGAT-PPFFASTVPSPTPH 57

Query: 1216 PYMWGGQH-LVSPYGTPIPYPALYPHAGLYPHPNMATAQGAPVTTGKTEGKETPAKK--- 1049
            PY+WGGQH L+ PYGTP+PYPALYP  G+Y HPNMAT         + EGK    ++   
Sbjct: 58   PYLWGGQHPLMPPYGTPVPYPALYPAGGVYAHPNMATPPNPAQANTEYEGKGPDGREKAS 117

Query: 1048 VKSSENIGLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENISRKDILANKNRSF 869
            VK S+   +V                                  EN + +D  ANK  SF
Sbjct: 118  VKKSKG-NVVGKAGESAKATSGSGNDGASQSAESGSDGSSDASDENNNHQDFAANKKGSF 176

Query: 868  DKMLEDGANAHNPAHHSSLNGKGEPSANLPIPLPGNPAGDMAATNLNIGMDLWSASHVGA 689
            D+ML D ANA N    +S              +PG P   M ATNLNIGMDLW+AS   A
Sbjct: 177  DQMLAD-ANAQNNTAGAS--------------VPGKPVVSMPATNLNIGMDLWNASPAAA 221

Query: 688  M-PSRVRPNASGVLPAAGHEGMVP---DHLFGQDEREMKRQRRKLSNRESARRSRLRKQA 521
               +++RPNASG     G  G+VP      + QDERE+KRQ+RK SNRESARRSRLRKQA
Sbjct: 222  PGATKIRPNASG-----GSSGIVPAIMPEQWIQDERELKRQKRKQSNRESARRSRLRKQA 276

Query: 520  ECEELQVKVENLSNENQNXXXXXXXXXXXXXXLTNDNASLLGELTQLYGEDAVSRLKVMN 341
            ECEELQ +VE L+ +N+N              L ++N S+  ELT+LYG DAV+ L+  N
Sbjct: 277  ECEELQARVETLTTDNRNLRDELQRLSEECDKLKSENDSIKEELTRLYGPDAVANLEQSN 336


>ref|XP_004143501.1| PREDICTED: G-box-binding factor 1-like [Cucumis sativus]
            gi|449530949|ref|XP_004172454.1| PREDICTED: G-box-binding
            factor 1-like [Cucumis sativus]
          Length = 377

 Score =  275 bits (704), Expect = 2e-71
 Identities = 159/370 (42%), Positives = 214/370 (57%), Gaps = 12/370 (3%)
 Frame = -1

Query: 1414 FFLLISMGSGEETTPAAKPSGPTASSQETPTTSAYPDWPGPMQAYYGAGATQPPFFAPTV 1235
            +F L  MG+GEE TP+ K S P +SSQE   T +YPDW   +QAYYGAGAT PPFFA TV
Sbjct: 6    WFQLWLMGTGEEGTPS-KTSKPPSSSQEIAPTPSYPDWSSSVQAYYGAGATPPPFFASTV 64

Query: 1234 ASPTPYPYMWGGQH-LVSPYGTPIPYPALYPHAGLYPHPNMATAQGAPVTTGKTEGKETP 1058
            ASPTP+PY+WGGQH L+SPYGTP+PYPA+YP  G+Y HPN+    G+     + EGK   
Sbjct: 65   ASPTPHPYLWGGQHPLMSPYGTPVPYPAIYPPGGVYAHPNITVTPGSVPINAEYEGKSPD 124

Query: 1057 AKKVKSSENIGLV-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENISRK 899
             K+  S ++ G+                                          EN +++
Sbjct: 125  GKERVSKKSKGMSGNTASGGGRTGESGKVASSSGNDGASQSAESGTEGSSEGSDENGNQQ 184

Query: 898  DILANKNRSFDKMLEDGANAHNPAHHSSLNGKGEPSANLPIPLPGNPAGDMAATNLNIGM 719
            +  ANK  SF++ML DGANA         N  G P+A   +   G P  ++  TNLN+GM
Sbjct: 185  EFAANKKGSFNQMLADGANAQ--------NNTGGPNAKSSV--TGKPIANIPGTNLNMGM 234

Query: 718  DLWSASHVGAMPSRVRPNASG----VLPAAGHEGMVPDHLFGQDEREMKRQRRKLSNRES 551
            DLW+ ++ G+   +VR NA       +P  G +GM+P+  + QDERE+KRQ+RK SNRES
Sbjct: 235  DLWNTTNAGSGAGKVRGNAVSSAIVTVPMVGRDGMMPEQ-WVQDERELKRQKRKQSNRES 293

Query: 550  ARRSRLRKQAECEELQVKVENLSNENQNXXXXXXXXXXXXXXLTNDNASLLGELTQLYGE 371
            ARRSRLRKQAECEELQ +V+ L+NEN+               LT++N+S+  ELT+  G 
Sbjct: 294  ARRSRLRKQAECEELQARVQTLNNENRTLRDELQRLSEECEKLTSENSSIKEELTRFCGP 353

Query: 370  DAVSRLKVMN 341
            +A++  +  N
Sbjct: 354  EALANFEKGN 363


>gb|ABK96172.1| unknown [Populus trichocarpa]
          Length = 354

 Score =  275 bits (704), Expect = 2e-71
 Identities = 169/376 (44%), Positives = 215/376 (57%), Gaps = 11/376 (2%)
 Frame = -1

Query: 1396 MGSGEETTPAAKPSGPTASSQETPTTSAYPDWPGPMQAYYGAGATQPPFFAPTVASPTPY 1217
            MG+GEE+TPA KPS PT+S+QE PTT  YPDW   MQAYYGAGAT PPF+A TVASP  +
Sbjct: 1    MGTGEESTPA-KPSKPTSSNQEIPTTPLYPDWSSSMQAYYGAGATPPPFYASTVASPASH 59

Query: 1216 PYMWGGQH-LVSPYGTPIPYPALYPHAGLYPHPNMATAQGAPVTTGKTEGK------ETP 1058
            PY+WG QH L+ PYGTP+PYPALYP  G+Y HPNMA    +     + EGK         
Sbjct: 60   PYLWGSQHPLIPPYGTPVPYPALYPAGGVYAHPNMAPTPNSAQANIEMEGKVPNGKDRAS 119

Query: 1057 AKKVKSSENIGLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENISRKDILANKN 878
            AKK K +                                        EN ++++  A+K 
Sbjct: 120  AKKTKGTSG----GKAGESGKAASGSGNDGASQSAESGSDGSSDASDENTNQQEYGASKK 175

Query: 877  RSFDKMLEDGANAHNPAHHSSLNGKGEPSANLPIPLPGNPAGDMAATNLNIGMDLWSASH 698
             SF++ML D ANA + +            AN+   +PG P   M ATNLNIGMDLW+AS 
Sbjct: 176  GSFNQMLAD-ANAQSTS----------AGANIQASVPGKPVASMPATNLNIGMDLWNASS 224

Query: 697  VGAMPSRVRPN----ASGVLPAAGHEGMVPDHLFGQDEREMKRQRRKLSNRESARRSRLR 530
              A  +++RPN     SGV+PA   E  +      QDERE+KRQ+RK SNRESARRSRLR
Sbjct: 225  -AAGATKMRPNPSCATSGVVPAGLPEQWI------QDERELKRQKRKQSNRESARRSRLR 277

Query: 529  KQAECEELQVKVENLSNENQNXXXXXXXXXXXXXXLTNDNASLLGELTQLYGEDAVSRLK 350
            KQAECEELQ +V+NLS++N N              L ++N S+  ELT+LYG + V++L+
Sbjct: 278  KQAECEELQARVQNLSSDNSNLRNELQSLSEECNKLKSENDSIKEELTRLYGPEVVAKLE 337

Query: 349  VMNGNTSLSPSVNGDG 302
              N   S+  S  G+G
Sbjct: 338  QSN-PASVPESHGGEG 352


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