BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006533
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297916.1| predicted protein [Populus trichocarpa] gi|2...   174   3e-41
ref|XP_004145209.1| PREDICTED: pentatricopeptide repeat-containi...   144   2e-32
ref|XP_003631195.1| PREDICTED: pentatricopeptide repeat-containi...   109   1e-21
ref|XP_002528136.1| conserved hypothetical protein [Ricinus comm...   105   1e-20
ref|XP_002455958.1| hypothetical protein SORBIDRAFT_03g027950 [S...    75   3e-11

>ref|XP_002297916.1| predicted protein [Populus trichocarpa] gi|222845174|gb|EEE82721.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  174 bits (441), Expect = 3e-41
 Identities = 96/225 (42%), Positives = 133/225 (59%)
 Frame = +1

Query: 64  NSSFSHSSLPTESQTTTNENLTPQEVDKINLLLPRLCESNHLHEAIRLIDTVLLTNPPXX 243
           +SS     L T S+  T   LT +EV KINLL+PRLC  NHL  AI+LI T LL NPP  
Sbjct: 32  SSSIDIPKLSTNSEVVTT--LTQEEVTKINLLIPRLCLLNHLTTAIQLITTSLLANPPPK 89

Query: 244 XXXXXXXXXXXTTEPNMIQPMSLLNMLNHNPSSHSYIIYFTKLLITSYLKKHKFKEVMKI 423
                      T++P+M +PMSLL +L H P +HS++     +LITSY+KK + KE +K+
Sbjct: 90  SLSFSILTHSLTSQPDMTKPMSLLTILRHTPQAHSHLSPMNTMLITSYIKKKRPKEALKV 149

Query: 424 VGWALRPDTNCVVDEMLYGIVVRGLCRGFRTVEALMXXXXXXXXXXXXXSELRSWVYRSL 603
             W LRP + C V+++++ ++V GLC     +E L                L+  VYRSL
Sbjct: 150 YNWMLRPGSPCKVEKIVFCVLVNGLCEIGWVLEGLKVLKDMVSVGFLPIGGLKERVYRSL 209

Query: 604 LREARIKEALELNEVLGCDLVSDGGGDNLKRVIALLDQMINNWTK 738
           L EAR+KEA+EL++ L CD   D  G+  K+VI LLD +I NW++
Sbjct: 210 LSEARVKEAVELDKAL-CDCFEDVSGEGGKKVIDLLDSLIRNWSE 253


>ref|XP_004145209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449471407|ref|XP_004153300.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449474047|ref|XP_004154059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449503375|ref|XP_004161971.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 258

 Score =  144 bits (364), Expect = 2e-32
 Identities = 86/225 (38%), Positives = 120/225 (53%), Gaps = 1/225 (0%)
 Frame = +1

Query: 61  NNSSFSHSSLPTESQTTTNENLTPQEVDKINLLLPRLCESNHLHEAIRLIDTVLLTNPPX 240
           ++SSF   S      T  N  LT  E+ +INLLLPRLC  NHL  AI L+   LLTNP  
Sbjct: 34  SSSSFISDSPSASIATKPNTTLTHDELTRINLLLPRLCLHNHLSTAISLLHATLLTNPSL 93

Query: 241 XXXXXXXXXXXXTTEPNMIQPMSLLNMLNHNPSSHSYIIYFTKLLITSYLKKHKFKEVMK 420
                        ++ +    MSLL  L H+P++  Y      +LI+SY K+ K KE +K
Sbjct: 94  HSLSLSVLSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKSKEALK 153

Query: 421 IVGWALRPDTNCVVDEMLYGIVVRGLCRGFRTVEALMXXXXXXXXXXXXXSELRSWVYRS 600
           +  W LRP + C  +E +Y  ++ GL R   T +AL               +LR+WV+RS
Sbjct: 154 LFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRS 213

Query: 601 LLREARIKEALELNEVLGCDLVSDGGG-DNLKRVIALLDQMINNW 732
           LL+EA I EA+E N+ L  + V D    D+L+RV  LL+++I NW
Sbjct: 214 LLKEAMIPEAMEFNDAL--NFVGDQNTIDHLRRVSELLNRIITNW 256


>ref|XP_003631195.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 142

 Score =  109 bits (272), Expect = 1e-21
 Identities = 63/145 (43%), Positives = 82/145 (56%)
 Frame = +1

Query: 304 MSLLNMLNHNPSSHSYIIYFTKLLITSYLKKHKFKEVMKIVGWALRPDTNCVVDEMLYGI 483
           M+LL  L HN  +H  +   T LLI+SY KK + KE  K+  W  RPD++C      Y +
Sbjct: 1   MALLTRLKHNQFAHYSLRPITTLLISSYFKKRRPKEAFKVFNWMSRPDSHCTPHVAAYSL 60

Query: 484 VVRGLCRGFRTVEALMXXXXXXXXXXXXXSELRSWVYRSLLREARIKEALELNEVLGCDL 663
           +V G CR    +EAL              ++LR+ VYRSLLREARI EA EL+ VL C  
Sbjct: 61  LVHGFCRNGFVLEALKVLRAMVGADMAPAADLRTRVYRSLLREARIGEAKELDAVLRC-- 118

Query: 664 VSDGGGDNLKRVIALLDQMINNWTK 738
           V D GG+   +V  LLD+MI NW +
Sbjct: 119 VGD-GGEGFGKVANLLDRMIGNWVE 142


>ref|XP_002528136.1| conserved hypothetical protein [Ricinus communis]
           gi|223532434|gb|EEF34227.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  105 bits (263), Expect = 1e-20
 Identities = 57/149 (38%), Positives = 87/149 (58%)
 Frame = +1

Query: 292 MIQPMSLLNMLNHNPSSHSYIIYFTKLLITSYLKKHKFKEVMKIVGWALRPDTNCVVDEM 471
           M +P+SLL +L H P +H Y+   T +LITSY+K+ + KE  K+  W LRP + C V+++
Sbjct: 1   MTKPVSLLTILRHTPQAHDYLTPITTMLITSYVKRKRPKEAFKVYQWMLRPGSPCRVEKI 60

Query: 472 LYGIVVRGLCRGFRTVEALMXXXXXXXXXXXXXSELRSWVYRSLLREARIKEALELNEVL 651
           ++  +V G C     +E L                LR  VYRSLL EAR++EA+EL++ L
Sbjct: 61  VFLALVNGFCEFGLVLEGLRILRDMVDVGFVPGVRLRRRVYRSLLMEARVREAVELDKAL 120

Query: 652 GCDLVSDGGGDNLKRVIALLDQMINNWTK 738
            C   ++G  D + ++  LLD +I NWT+
Sbjct: 121 -C-FYANGDVDGVSKLRKLLDPVIRNWTE 147


>ref|XP_002455958.1| hypothetical protein SORBIDRAFT_03g027950 [Sorghum bicolor]
           gi|241927933|gb|EES01078.1| hypothetical protein
           SORBIDRAFT_03g027950 [Sorghum bicolor]
          Length = 231

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 56/205 (27%), Positives = 91/205 (44%)
 Frame = +1

Query: 118 ENLTPQEVDKINLLLPRLCESNHLHEAIRLIDTVLLTNPPXXXXXXXXXXXXXTTEPNMI 297
           E L+P ++D I+ LLPRL  + H+  A RL+   LL                  + P + 
Sbjct: 33  EPLSPSDLDAISALLPRLVSAGHVPAAGRLLSAALLLPGSQDRLPLDSLAAHLASIPTLS 92

Query: 298 QPMSLLNMLNHNPSSHSYIIYFTKLLITSYLKKHKFKEVMKIVGWALRPDTNCVVDEMLY 477
              +LL  L H+P+  S ++  + LL  S L   + ++   ++ W  RPD+    D   Y
Sbjct: 93  PAFALLTALRHHPARPSPLLLASPLL-GSLLSLRRARDASSVLRWLCRPDSPRRPDAATY 151

Query: 478 GIVVRGLCRGFRTVEALMXXXXXXXXXXXXXSELRSWVYRSLLREARIKEALELNEVLGC 657
              V GLCR      AL               ELR  V  ++L++ARI+EA  L E L  
Sbjct: 152 ADAVVGLCRLEDPRAALAALREMAADGLPATRELREAVRDAMLQDARIEEAWALEEAL-- 209

Query: 658 DLVSDGGGDNLKRVIALLDQMINNW 732
                   +   +++ L+D++++ W
Sbjct: 210 -----RQPEETGKLVELIDKLLSAW 229