BLASTX nr result

ID: Coptis24_contig00006520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006520
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20163.3| unnamed protein product [Vitis vinifera]              189   9e-46
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...   189   9e-46
emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]   182   1e-43
ref|XP_002283439.2| PREDICTED: probable disease resistance prote...   177   5e-42
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...   170   6e-40

>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score =  189 bits (480), Expect = 9e-46
 Identities = 114/303 (37%), Positives = 173/303 (57%), Gaps = 1/303 (0%)
 Frame = +3

Query: 108  MYTFLNEHWKYMKSPTKEIETLRNIRQDLNDRMTDITVRLRKEEQEHRKKPTSEVQTWLK 287
            M+  +++ + Y K   K   TL+   + L  R  D+ + L+  + + RKK   EV+ WLK
Sbjct: 17   MWPSISKCFNYHKILDKNCRTLKEKMERLKSREQDVKIELQNAQYQ-RKKEKKEVENWLK 75

Query: 288  NVRYSIFDINDIEEEARVGKISLNGVLPNCRSRLNLGRRISGRIVEATKLLDKS-FSDDS 464
             V+    D+  +E+E   G+I          SRL   R+    I +  +LL++  F +  
Sbjct: 76   EVQNMKDDLERMEQEVGKGRIF---------SRLGFLRQSEEHIEKVDELLERGRFPEGI 126

Query: 465  LAIHKPDRGIPMPTPEIVGKTTAEKNLEMVWECLMDDEVRIIGVFGMGGIGKSTIMMKIN 644
            L     D G  + T +++G+TT ++NLE +W CL   E++ IGV+GMGGIGK+TI+  I+
Sbjct: 127  LIDVLRDEGRALLTTQLIGETTTKRNLEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIH 186

Query: 645  NRLLEEKVYFDEVIWVTVSKNSTIHKVQDDIAQAIGLNFSTERSSVKRSAXXXXXXXXXX 824
            N LLE+K  F  V WVTVSK+S++ K+QD IA+ I L+ S E     RSA          
Sbjct: 187  NLLLEKKDTFGLVYWVTVSKDSSVRKLQDVIAEKINLDLSKEEDERLRSALLFEALQKEK 246

Query: 825  XVMLILDDMWDYFSLYEIGIPEPAKANGCKVALTTRSIEVCHRMGCQKRVEVELLSKEEA 1004
              +LI DD+W+ +   E+GI  P   +  K+ +TTRS EVC +MGC++ ++VE L +EEA
Sbjct: 247  KFVLIFDDVWEVYPPREVGI--PIGVDRGKLIITTRSREVCLKMGCKEIIKVEPLYEEEA 304

Query: 1005 WEL 1013
            WEL
Sbjct: 305  WEL 307


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1016

 Score =  189 bits (480), Expect = 9e-46
 Identities = 114/303 (37%), Positives = 173/303 (57%), Gaps = 1/303 (0%)
 Frame = +3

Query: 108  MYTFLNEHWKYMKSPTKEIETLRNIRQDLNDRMTDITVRLRKEEQEHRKKPTSEVQTWLK 287
            M+  +++ + Y K   K   TL+   + L  R  D+ + L+  + + RKK   EV+ WLK
Sbjct: 17   MWPSISKCFNYHKILDKNCRTLKEKMERLKSREQDVKIELQNAQYQ-RKKEKKEVENWLK 75

Query: 288  NVRYSIFDINDIEEEARVGKISLNGVLPNCRSRLNLGRRISGRIVEATKLLDKS-FSDDS 464
             V+    D+  +E+E   G+I          SRL   R+    I +  +LL++  F +  
Sbjct: 76   EVQNMKDDLERMEQEVGKGRIF---------SRLGFLRQSEEHIEKVDELLERGRFPEGI 126

Query: 465  LAIHKPDRGIPMPTPEIVGKTTAEKNLEMVWECLMDDEVRIIGVFGMGGIGKSTIMMKIN 644
            L     D G  + T +++G+TT ++NLE +W CL   E++ IGV+GMGGIGK+TI+  I+
Sbjct: 127  LIDVLRDEGRALLTTQLIGETTTKRNLEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIH 186

Query: 645  NRLLEEKVYFDEVIWVTVSKNSTIHKVQDDIAQAIGLNFSTERSSVKRSAXXXXXXXXXX 824
            N LLE+K  F  V WVTVSK+S++ K+QD IA+ I L+ S E     RSA          
Sbjct: 187  NLLLEKKDTFGLVYWVTVSKDSSVRKLQDVIAEKINLDLSKEEDERLRSALLFEALQKEK 246

Query: 825  XVMLILDDMWDYFSLYEIGIPEPAKANGCKVALTTRSIEVCHRMGCQKRVEVELLSKEEA 1004
              +LI DD+W+ +   E+GI  P   +  K+ +TTRS EVC +MGC++ ++VE L +EEA
Sbjct: 247  KFVLIFDDVWEVYPPREVGI--PIGVDRGKLIITTRSREVCLKMGCKEIIKVEPLYEEEA 304

Query: 1005 WEL 1013
            WEL
Sbjct: 305  WEL 307


>emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]
          Length = 1052

 Score =  182 bits (462), Expect = 1e-43
 Identities = 105/303 (34%), Positives = 169/303 (55%), Gaps = 1/303 (0%)
 Frame = +3

Query: 108  MYTFLNEHWKYMKSPTKEIETLRNIRQDLNDRMTDITVRLRKEEQEHRKKPTSEVQTWLK 287
            M++ ++ ++ Y K   + + TL    + L  R  DI   L   +   RKK   EV+ WLK
Sbjct: 10   MWSSISIYFNYHKILNENLTTLGEKMRRLECREEDINTELENAQYNRRKKAKREVENWLK 69

Query: 288  NVRYSIFDINDIEEEARVGKISLNGVLPNCRSRLNLGRRISGRIVEATKLLDK-SFSDDS 464
             V++       IE+E    +           SR +   +    + +  ++ +  +F +  
Sbjct: 70   EVQHVKDSAQKIEQEVGERRYF---------SRFSFLSQFEANMKKVDEMFELGNFPNGI 120

Query: 465  LAIHKPDRGIPMPTPEIVGKTTAEKNLEMVWECLMDDEVRIIGVFGMGGIGKSTIMMKIN 644
            L     D G  + T +++G+TTA++NLE +W CL   E++ IGV+GMGGIGK+T++  I+
Sbjct: 121  LIDVHQDEGNALLTTQLIGETTAKRNLENIWTCLEKGEIQSIGVWGMGGIGKTTVVTHIH 180

Query: 645  NRLLEEKVYFDEVIWVTVSKNSTIHKVQDDIAQAIGLNFSTERSSVKRSAXXXXXXXXXX 824
            NRLL+ +  F  V WVTVSK S I ++QD IA  + L+FS E     R+A          
Sbjct: 181  NRLLKNRDTFGHVYWVTVSKESNIRRLQDVIAGKLNLHFSKEEDEKIRAALLSEALRKEK 240

Query: 825  XVMLILDDMWDYFSLYEIGIPEPAKANGCKVALTTRSIEVCHRMGCQKRVEVELLSKEEA 1004
              +L+LDD+W+ ++  ++GI  P   +G K+ +TTRS +VC RMGC++ +++E LS+EEA
Sbjct: 241  KFVLVLDDVWEVYAPRKVGI--PLGVDGGKLIITTRSRDVCQRMGCKEIIKMEPLSEEEA 298

Query: 1005 WEL 1013
            WEL
Sbjct: 299  WEL 301


>ref|XP_002283439.2| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
            vinifera]
          Length = 1276

 Score =  177 bits (448), Expect = 5e-42
 Identities = 107/303 (35%), Positives = 167/303 (55%), Gaps = 1/303 (0%)
 Frame = +3

Query: 108  MYTFLNEHWKYMKSPTKEIETLRNIRQDLNDRMTDITVRLRKEEQEHRKKPTSEVQTWLK 287
            M++ ++ ++ Y K   + + TLR  R+ L  R  DI   L   +   RKK   EV+ WL 
Sbjct: 279  MWSSISNYFNYHKIVNENLTTLREKRKRLECREEDINTELEDAQYNRRKKAKREVENWLI 338

Query: 288  NVRYSIFDINDIEEEARVGKISLNGVLPNCRSRLNLGRRISGRIVEATKLLDK-SFSDDS 464
             V+    D   IE++A   +           SR +   +    + +  ++ +  +F +  
Sbjct: 339  EVQVVKDDAQQIEQKAGERRYF---------SRFSFLSQFEANMKKVDEIFELGNFPNGI 389

Query: 465  LAIHKPDRGIPMPTPEIVGKTTAEKNLEMVWECLMDDEVRIIGVFGMGGIGKSTIMMKIN 644
            L     D G  + T +++G+TTA+     +W CL   E++ IGV+GMGGIGK+T++  I+
Sbjct: 390  LIDVHQDEGNALLTAQLIGETTAKN----IWTCLEKGEIQSIGVWGMGGIGKTTVVTHIH 445

Query: 645  NRLLEEKVYFDEVIWVTVSKNSTIHKVQDDIAQAIGLNFSTERSSVKRSAXXXXXXXXXX 824
            NRLLE +  F  V WVTVSK+S+I ++QD IA  I L+FS E     R+A          
Sbjct: 446  NRLLENRDTFGHVYWVTVSKDSSIRRLQDAIAGKINLDFSKEEDEKIRAALLSEALQKKK 505

Query: 825  XVMLILDDMWDYFSLYEIGIPEPAKANGCKVALTTRSIEVCHRMGCQKRVEVELLSKEEA 1004
              +L+LDD+W+ +   E+GI  P   +G K+ +TTRS +VC RMGC++ +++E LSK EA
Sbjct: 506  KFVLVLDDVWEVYVPREVGI--PIGVDGGKLIITTRSRDVCLRMGCKEIIKMEPLSKVEA 563

Query: 1005 WEL 1013
            WEL
Sbjct: 564  WEL 566


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1075

 Score =  170 bits (430), Expect = 6e-40
 Identities = 107/295 (36%), Positives = 160/295 (54%), Gaps = 30/295 (10%)
 Frame = +3

Query: 219  VRLRKEEQEHRKKPTSEVQTWLKNVRYSIFDINDIEEEARVGKISLNGVLPNCRSRLNL- 395
            V  R+ EQE R  P   ++ W ++ R+  F I ++      G     GV        NL 
Sbjct: 99   VEARRMEQEGRDLPDMAMEDWTESTRWEEF-IEELMVINEAGGSQGQGVYEGMLDTENLT 157

Query: 396  -GRRISG-------RIVE---------------------ATKLLDKSFSDDSLAIHKPDR 488
              R + G       R+ E                      + + D+S   + L  HK  +
Sbjct: 158  HSRTVEGIELIDQVRVYEEQGADVSDGGVENLTDNFTGSVSIVTDESRVSEGLHAHKA-K 216

Query: 489  GIPMPTPEIVGKTTAEKNLEMVWECLMDDEVRIIGVFGMGGIGKSTIMMKINNRLLEEKV 668
            G  + T ++VG+ + ++N EM+W  LM D+V  +G++GMGG+GK++++  I+N+LL+   
Sbjct: 217  GEALLTTKLVGQAS-DRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQRPS 275

Query: 669  YFDEVIWVTVSKNSTIHKVQDDIAQAIGLNFSTERSSVKRSAXXXXXXXXXXXVMLILDD 848
             F+ V WVTVS+N TI K+Q  IA+AI L+ S E    KR+A            +LILDD
Sbjct: 276  SFNYVFWVTVSQNFTISKLQYLIAKAINLDLSNEEDEKKRAAKLSKALVAKGKSVLILDD 335

Query: 849  MWDYFSLYEIGIPEPAKANGCKVALTTRSIEVCHRMGCQKRVEVELLSKEEAWEL 1013
            +W++F L  +GI  P + N CK+ LT+RS+EVC RMGCQK ++VELL+KEEAW L
Sbjct: 336  LWNHFLLEMVGI--PVEVNACKLILTSRSLEVCRRMGCQKSIKVELLTKEEAWTL 388


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