BLASTX nr result

ID: Coptis24_contig00006503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006503
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
emb|CBI16413.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246...    97   2e-18
ref|XP_002871536.1| hypothetical protein ARALYDRAFT_909245 [Arab...    94   1e-17
ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1|
           predicted protein [Populus trichocarpa]
          Length = 858

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/111 (45%), Positives = 68/111 (61%)
 Frame = +2

Query: 38  MNSFIYLTLISLFLNGFYLHALGKECTNIPTVLSSKTLRSELLSSYNDSWREAMFAQYPH 217
           MN  + L ++S+  +      + KECTNIPT LSS + R ELLSS N++W+E MF  Y H
Sbjct: 1   MNGLLVLAMVSMLCS----FGISKECTNIPTQLSSHSFRYELLSSQNETWKEEMFEHY-H 55

Query: 218 LTHTDDEAWSDLFPRRILKKEEELDWNKLYKLIKYSNGNTGNEKFKGNFLN 370
           L  TDD AWS L PR+IL++E+E  W  +Y+ +K         K  GNFLN
Sbjct: 56  LIPTDDSAWSSLLPRKILREEDEHSWEMMYRNLK------SPLKSSGNFLN 100


>emb|CBI16413.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 43/81 (53%), Positives = 59/81 (72%)
 Frame = +2

Query: 101 LGKECTNIPTVLSSKTLRSELLSSYNDSWREAMFAQYPHLTHTDDEAWSDLFPRRILKKE 280
           LGKECTN+PT LSS + R ELL+S N+SW+  MF  Y HL HTDD AWS+L PR++L++E
Sbjct: 23  LGKECTNVPTQLSSHSFRYELLASNNESWKAEMFQHY-HLIHTDDSAWSNLLPRKLLREE 81

Query: 281 EELDWNKLYKLIKYSNGNTGN 343
           +E  W  +Y+ +K  +G+  N
Sbjct: 82  DEFSWAMMYRNMKNYDGSNSN 102


>ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera]
          Length = 864

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 43/81 (53%), Positives = 59/81 (72%)
 Frame = +2

Query: 101 LGKECTNIPTVLSSKTLRSELLSSYNDSWREAMFAQYPHLTHTDDEAWSDLFPRRILKKE 280
           LGKECTN+PT LSS + R ELL+S N+SW+  MF  Y HL HTDD AWS+L PR++L++E
Sbjct: 23  LGKECTNVPTQLSSHSFRYELLASNNESWKAEMFQHY-HLIHTDDSAWSNLLPRKLLREE 81

Query: 281 EELDWNKLYKLIKYSNGNTGN 343
           +E  W  +Y+ +K  +G+  N
Sbjct: 82  DEFSWAMMYRNMKNYDGSNSN 102


>ref|XP_002871536.1| hypothetical protein ARALYDRAFT_909245 [Arabidopsis lyrata subsp.
           lyrata] gi|297317373|gb|EFH47795.1| hypothetical protein
           ARALYDRAFT_909245 [Arabidopsis lyrata subsp. lyrata]
          Length = 862

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/111 (46%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
 Frame = +2

Query: 38  MNSFIYLTLISLFLNGFYLHALGKECTNIPTVLSSKTLRSELLSSYNDSWREAMFAQYPH 217
           M S + +T++ L    F L  + KECTN PT LSS T RSELL S N++ +  +F+ Y H
Sbjct: 1   MKSGLIITIVLLLYTSFVLVCVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHY-H 59

Query: 218 LTHTDDEAWSDLFPRRILKKE-EELDWNKLYKLIKYSNGNTGNEKFKGNFL 367
           LT TDD AWS L PR++LK+E +E  W  LY+  K SN +       GNFL
Sbjct: 60  LTPTDDAAWSTLLPRKMLKEEADEFAWTMLYRTFKDSNSS-------GNFL 103


>ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1|
           predicted protein [Populus trichocarpa]
          Length = 858

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/102 (49%), Positives = 67/102 (65%)
 Frame = +2

Query: 38  MNSFIYLTLISLFLNGFYLHALGKECTNIPTVLSSKTLRSELLSSYNDSWREAMFAQYPH 217
           M   I L ++S+ L GF      KECTN PT LSS T R  LLSS N++W+E MFA Y H
Sbjct: 1   MKGLIVLVVLSM-LCGF---GTSKECTNTPTQLSSHTFRYALLSSENETWKEEMFAHY-H 55

Query: 218 LTHTDDEAWSDLFPRRILKKEEELDWNKLYKLIKYSNGNTGN 343
           LT TDD AW++L PR+IL++E+E  W  +Y+ +K    ++GN
Sbjct: 56  LTPTDDSAWANLLPRKILREEDEYSWAMMYRNLKSPLKSSGN 97


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