BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006502
         (1337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca...   187   7e-45
ref|XP_002329158.1| BED finger-nbs-lrr resistance protein [Popul...   184   4e-44
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...   182   1e-43
emb|CBI20163.3| unnamed protein product [Vitis vinifera]              181   4e-43
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...   181   4e-43

>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 958

 Score =  187 bits (474), Expect = 7e-45
 Identities = 95/202 (47%), Positives = 133/202 (65%), Gaps = 2/202 (0%)
 Frame = -2

Query: 604 EKNLEMVWGCLMDDEVRKIGVFGMGGIGRKTLLMKINNRLLEEKVYFDKVIWVTVSKNSN 425
           +KN EM+W  LM DEV  IG++GMGG+G+ +L   I+N+LL+    F  V+W+TVS++ +
Sbjct: 112 DKNREMIWSWLMKDEVSSIGIYGMGGVGKSSLATHIHNQLLQRPTSFKHVLWITVSQDFS 171

Query: 424 IHKVQDDVAQAIGLDFSTXXXXXXXXXXXXXXXXXXXRVMLILDDMWDAFFLYEIGIPEP 245
           I K+Q  +A AI L+ S                    + +LILDD+W+ F L ++GI  P
Sbjct: 172 ISKLQYLIANAINLNLSNEDDEKKRAAKLYKALVAKGKSVLILDDLWNHFHLEKVGI--P 229

Query: 244 TKANRCKLALSTRSIEVCHRMGCQRRVEVELLSKEESWELFVAKIGN--VLTPEVTEIAK 71
            + N CKL L+TRS+EVC RMGCQ R++VELL+KEE+W LF  K+G+   L+PEV ++AK
Sbjct: 230 VEVNMCKLILTTRSLEVCRRMGCQERIKVELLTKEEAWTLFKEKLGHDAALSPEVEQMAK 289

Query: 70  LIVDECDRLPLAIITTGGAMRG 5
           L+  EC  LPL IIT  G+MRG
Sbjct: 290 LVAAECACLPLGIITMAGSMRG 311


>ref|XP_002329158.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869827|gb|EEF06958.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 954

 Score =  184 bits (467), Expect = 4e-44
 Identities = 94/203 (46%), Positives = 131/203 (64%), Gaps = 2/203 (0%)
 Frame = -2

Query: 607 AEKNLEMVWGCLMDDEVRKIGVFGMGGIGRKTLLMKINNRLLEEKVYFDKVIWVTVSKNS 428
           +++N E +W  LM D+V  +G++GMGG+G+ +L  +I+N+LL+    F+ V WVTVS+N 
Sbjct: 117 SDRNKETIWSWLMKDDVLSVGIYGMGGVGKTSLATQIHNQLLQRPSSFNYVFWVTVSQNF 176

Query: 427 NIHKVQDDVAQAIGLDFSTXXXXXXXXXXXXXXXXXXXRVMLILDDMWDAFFLYEIGIPE 248
            I K+Q  +A+AI LD S                    + +LILDD+W+ F L  +GI  
Sbjct: 177 TISKLQYLIAKAINLDLSNEEDEKKRAAKLSKALVAKGKSVLILDDIWNHFLLETVGI-- 234

Query: 247 PTKANRCKLALSTRSIEVCHRMGCQRRVEVELLSKEESWELFVAKIGNVLT--PEVTEIA 74
           P   N CKL L++RS+EVC RMGCQ+ ++VELL+KEE+W LFV K+GN  T  PEV +IA
Sbjct: 235 PVGVNACKLILTSRSLEVCRRMGCQKSIKVELLTKEEAWTLFVEKLGNYATFSPEVVQIA 294

Query: 73  KLIVDECDRLPLAIITTGGAMRG 5
           K +  EC RLPL II   G+MRG
Sbjct: 295 KSVAAECARLPLGIIAMAGSMRG 317


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1075

 Score =  182 bits (463), Expect = 1e-43
 Identities = 93/202 (46%), Positives = 132/202 (65%), Gaps = 2/202 (0%)
 Frame = -2

Query: 607 AEKNLEMVWGCLMDDEVRKIGVFGMGGIGRKTLLMKINNRLLEEKVYFDKVIWVTVSKNS 428
           +++N EM+W  LM D+V  +G++GMGG+G+ +L+  I+N+LL+    F+ V WVTVS+N 
Sbjct: 230 SDRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQRPSSFNYVFWVTVSQNF 289

Query: 427 NIHKVQDDVAQAIGLDFSTXXXXXXXXXXXXXXXXXXXRVMLILDDMWDAFFLYEIGIPE 248
            I K+Q  +A+AI LD S                    + +LILDD+W+ F L  +GI  
Sbjct: 290 TISKLQYLIAKAINLDLSNEEDEKKRAAKLSKALVAKGKSVLILDDLWNHFLLEMVGI-- 347

Query: 247 PTKANRCKLALSTRSIEVCHRMGCQRRVEVELLSKEESWELFVAKIGNV--LTPEVTEIA 74
           P + N CKL L++RS+EVC RMGCQ+ ++VELL+KEE+W LFV K+GN   L+PEV +IA
Sbjct: 348 PVEVNACKLILTSRSLEVCRRMGCQKSIKVELLTKEEAWTLFVEKLGNYADLSPEVADIA 407

Query: 73  KLIVDECDRLPLAIITTGGAMR 8
           K +  EC  LPL II   G+MR
Sbjct: 408 KSVAAECACLPLGIIAMAGSMR 429


>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score =  181 bits (459), Expect = 4e-43
 Identities = 109/289 (37%), Positives = 166/289 (57%), Gaps = 3/289 (1%)
 Frame = -2

Query: 868 VQTWLKNVRNAIFDINDIKEEARVGKICLNGVLPNCH*RLNMRRRISETTVDATKLLEKS 689
           V+ WLK V+N   D+  +++E   G+I           RL   R+  E      +LLE+ 
Sbjct: 70  VENWLKEVQNMKDDLERMEQEVGKGRIFS---------RLGFLRQSEEHIEKVDELLERG 120

Query: 688 FSDDSFAIQI-QEKGIPMPTPIIVRKTTAEKNLEMVWGCLMDDEVRKIGVFGMGGIGRKT 512
              +   I + +++G  + T  ++ +TT ++NLE +W CL   E++ IGV+GMGGIG+ T
Sbjct: 121 RFPEGILIDVLRDEGRALLTTQLIGETTTKRNLEKIWTCLEKGEIQSIGVWGMGGIGKTT 180

Query: 511 LLMKINNRLLEEKVYFDKVIWVTVSKNSNIHKVQDDVAQAIGLDFSTXXXXXXXXXXXXX 332
           ++  I+N LLE+K  F  V WVTVSK+S++ K+QD +A+ I LD S              
Sbjct: 181 IVTHIHNLLLEKKDTFGLVYWVTVSKDSSVRKLQDVIAEKINLDLSKEEDERLRSALLFE 240

Query: 331 XXXXXXRVMLILDDMWDAFFLYEIGIPEPTKANRCKLALSTRSIEVCHRMGCQRRVEVEL 152
                 + +LI DD+W+ +   E+GI  P   +R KL ++TRS EVC +MGC+  ++VE 
Sbjct: 241 ALQKEKKFVLIFDDVWEVYPPREVGI--PIGVDRGKLIITTRSREVCLKMGCKEIIKVEP 298

Query: 151 LSKEESWELFVAKIG--NVLTPEVTEIAKLIVDECDRLPLAIITTGGAM 11
           L +EE+WELF   +   N L+ +  +IAK IV EC  LPLAI+TT  +M
Sbjct: 299 LYEEEAWELFNKTLERYNALSQKEEKIAKDIVRECAGLPLAIVTTARSM 347


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Vitis vinifera]
          Length = 1016

 Score =  181 bits (459), Expect = 4e-43
 Identities = 109/289 (37%), Positives = 166/289 (57%), Gaps = 3/289 (1%)
 Frame = -2

Query: 868 VQTWLKNVRNAIFDINDIKEEARVGKICLNGVLPNCH*RLNMRRRISETTVDATKLLEKS 689
           V+ WLK V+N   D+  +++E   G+I           RL   R+  E      +LLE+ 
Sbjct: 70  VENWLKEVQNMKDDLERMEQEVGKGRIFS---------RLGFLRQSEEHIEKVDELLERG 120

Query: 688 FSDDSFAIQI-QEKGIPMPTPIIVRKTTAEKNLEMVWGCLMDDEVRKIGVFGMGGIGRKT 512
              +   I + +++G  + T  ++ +TT ++NLE +W CL   E++ IGV+GMGGIG+ T
Sbjct: 121 RFPEGILIDVLRDEGRALLTTQLIGETTTKRNLEKIWTCLEKGEIQSIGVWGMGGIGKTT 180

Query: 511 LLMKINNRLLEEKVYFDKVIWVTVSKNSNIHKVQDDVAQAIGLDFSTXXXXXXXXXXXXX 332
           ++  I+N LLE+K  F  V WVTVSK+S++ K+QD +A+ I LD S              
Sbjct: 181 IVTHIHNLLLEKKDTFGLVYWVTVSKDSSVRKLQDVIAEKINLDLSKEEDERLRSALLFE 240

Query: 331 XXXXXXRVMLILDDMWDAFFLYEIGIPEPTKANRCKLALSTRSIEVCHRMGCQRRVEVEL 152
                 + +LI DD+W+ +   E+GI  P   +R KL ++TRS EVC +MGC+  ++VE 
Sbjct: 241 ALQKEKKFVLIFDDVWEVYPPREVGI--PIGVDRGKLIITTRSREVCLKMGCKEIIKVEP 298

Query: 151 LSKEESWELFVAKIG--NVLTPEVTEIAKLIVDECDRLPLAIITTGGAM 11
           L +EE+WELF   +   N L+ +  +IAK IV EC  LPLAI+TT  +M
Sbjct: 299 LYEEEAWELFNKTLERYNALSQKEEKIAKDIVRECAGLPLAIVTTARSM 347