BLASTX nr result
ID: Coptis24_contig00006501
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00006501
(1470 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI21002.3| unnamed protein product [Vitis vinifera] 208 3e-51
ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809... 206 1e-50
ref|NP_194970.1| tudor-like RNA-binding protein [Arabidopsis tha... 191 3e-46
ref|XP_002869273.1| agenet domain-containing protein [Arabidopsi... 185 2e-44
ref|NP_974660.1| tudor-like RNA-binding protein [Arabidopsis tha... 185 3e-44
>emb|CBI21002.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 208 bits (529), Expect = 3e-51
Identities = 145/386 (37%), Positives = 195/386 (50%), Gaps = 83/386 (21%)
Frame = +1
Query: 193 MRFFKGDRVEVLTKRDVPSGSWRYGIILSGNGHTYYIRSESATGSSDTTGVPIVERVPRK 372
M+F KG +VEVL K++VPSG+W I+SGNGH Y +R +S G ++ V +RV RK
Sbjct: 1 MKFRKGSKVEVLNKKEVPSGAWHCAEIISGNGHNYSVRYDSYLGMTNKANV---DRVSRK 57
Query: 373 AIRPCP-PLKSIESWAAGDFVEVFDNSSWKFATVLKVTEFNLFLVKLLGTSQKVKANKSN 549
AIRPCP P+K +ESW GD VEVF++ SWK A VLKVT +LV+LLG+ + + +KSN
Sbjct: 58 AIRPCPLPVKGMESWVTGDVVEVFNDGSWKCAMVLKVTCAVYYLVRLLGSCHEFEVHKSN 117
Query: 550 LRLPQSWQDGEWIVIQKVSADQPSTRRYLNKSL-------------DKDLKMRHVRDDCS 690
+R+ Q+W D +W+VI + S R +NK L D+K++ D
Sbjct: 118 IRVRQAWIDDKWVVIGQGSITFEDVR--VNKLLTSNCHQKMSFQVPQADMKLKLQAGD-D 174
Query: 691 PVESESGLQIPRMVSSKILKRGSPGNLS-----RGTNQKLRAMEKEGR------------ 819
+ + Q MVSSK LKR SP S G QK+RA+E GR
Sbjct: 175 FFQKHADFQDSPMVSSKTLKRASPYCSSGLEAYSGNIQKMRAIENGGRQRVITGYSSPLR 234
Query: 820 ---------------------LQRRDTM-------------SFYAKDLEANHAERSACSV 897
R T F A+ E+N ++ +CSV
Sbjct: 235 AKVDAVAYPRLNLGEKYMHASFNDRSTKYCEMERGKPNGVDCFLARSSESNDSDSMSCSV 294
Query: 898 GSSGTSN--------------KEEMVD----GTHKLALDAYYRTMEALRVSGFISWEQEE 1023
GS +N +++ D H L L AY RT+ AL SG +SWEQ
Sbjct: 295 GSCSINNNGPNKFSSCILAHPRQDTDDLCTASIHSLELHAYRRTLAALHASGPLSWEQST 354
Query: 1024 MITNLRLKLNISNDEHLMELRKLVSA 1101
M+TNLR L+ISNDEHLMEL+ L+SA
Sbjct: 355 MLTNLRCSLHISNDEHLMELKNLISA 380
>ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809539 [Glycine max]
Length = 397
Score = 206 bits (524), Expect = 1e-50
Identities = 144/401 (35%), Positives = 196/401 (48%), Gaps = 97/401 (24%)
Frame = +1
Query: 193 MRFFKGDRVEVLTKRDVPSGSWRYGIILSGNGHTYYIRSESATGSSDTTGVPIVERVPRK 372
MRF KG++VEVL+K +VP GSW Y I+ GNGH Y ++ + G G IVE+V RK
Sbjct: 1 MRFKKGNKVEVLSKVEVPCGSWLYAEIICGNGHHYTVKYD---GYESDAGEAIVEQVSRK 57
Query: 373 AIRPCPP-LKSIESWAAGDFVEVFDNSSWKFATVLKVTEFNLFLVKLLGTSQKVKANKSN 549
IRPCPP L+ ++W +GD VEVF N SWK ATVLKV N LV+LLG+S + + +K +
Sbjct: 58 DIRPCPPALELTDNWNSGDVVEVFQNFSWKMATVLKVFGKNHILVRLLGSSLEFQVSKFD 117
Query: 550 LRLPQSWQDGEWIVIQKVSADQPSTRR--------YLNKSLDKDLKMRHVRDDCSPVESE 705
+R+ QSWQD +WI++ K S+ + +R Y L R + S +ES
Sbjct: 118 IRVRQSWQDDKWIIVGKGSSSHENRKRSSAQLQKMYTKTKLSGSAYYRPEKKKLSILES- 176
Query: 706 SGLQIPRMVSSKILKRGSPGNLSRGTN--QKLRAMEKEGR------------LQRRDTMS 843
++VS K LKRGS + K RA E EGR L++ +S
Sbjct: 177 ------KLVSFKTLKRGSNSQVDAYAKPPPKFRARENEGRCHRARLRNPPTPLKQVQGVS 230
Query: 844 F--------------------------------YAKDLEANHAERSACSVGSSGTSNK-- 921
F ++LE+NHA CSVGS +++
Sbjct: 231 FPREVIAEECIPASVNNRKTGISNMVDMERRKQTGENLESNHAYSVTCSVGSCSITSRNS 290
Query: 922 ----------------------------------------EEMVDGTHKLALDAYYRTME 981
EE+ H+L L AY+ T+E
Sbjct: 291 YKSQFPVYAGPFDDVDSSFSDAESVCQRSDEEGNCSPPTQEELAAEIHRLELHAYHCTIE 350
Query: 982 ALRVSGFISWEQEEMITNLRLKLNISNDEHLMELRKLVSAQ 1104
AL SG +SWEQE ++TNLRL L+ISNDEHLMELR L+S++
Sbjct: 351 ALHASGPLSWEQEALMTNLRLSLHISNDEHLMELRNLISSE 391
>ref|NP_194970.1| tudor-like RNA-binding protein [Arabidopsis thaliana]
gi|4049346|emb|CAA22571.1| putative protein [Arabidopsis
thaliana] gi|7270148|emb|CAB79961.1| putative protein
[Arabidopsis thaliana] gi|27765060|gb|AAO23651.1|
At4g32440 [Arabidopsis thaliana]
gi|110742940|dbj|BAE99365.1| hypothetical protein
[Arabidopsis thaliana] gi|332660659|gb|AEE86059.1|
tudor-like RNA-binding protein [Arabidopsis thaliana]
Length = 377
Score = 191 bits (486), Expect = 3e-46
Identities = 129/382 (33%), Positives = 187/382 (48%), Gaps = 80/382 (20%)
Frame = +1
Query: 193 MRFFKGDRVEVLTKRDVPSGSWRYGIILSGNGHTYYIRSESATGSSDTTGVPIVERVPRK 372
MR KG RVEV + ++ P G+WR I+SGNGHTY +R S + ++E+VPRK
Sbjct: 1 MRIRKGSRVEVFSNKEAPYGAWRCAEIVSGNGHTYNVRFYSFQIEHEEA---VMEKVPRK 57
Query: 373 AIRPCPPLKSIESWAAGDFVEVFDNSSWKFATVLKVTEFNLFLVKLLGTSQKVKANKSNL 552
IRPCPPL +E W G+ VEV DN SWK ATV + + ++V+LLGT +++ +K NL
Sbjct: 58 IIRPCPPLVDVERWDTGELVEVLDNFSWKAATVREELSGHYYVVRLLGTPEELTFHKVNL 117
Query: 553 RLPQSWQDGEWIVIQKVSADQPSTRRYLNKSLDKDLKMRHVRDDCSPVESESGLQIPRMV 732
R +SWQD W+ I K+S S+ L V P + L P +V
Sbjct: 118 RARKSWQDERWVAIGKISGSLKSS----------TLTGSDVHQKLQPHRNSMPLHEPSVV 167
Query: 733 SSKILKRGSPGNLSR------GTNQKLRAMEKEGRLQRRDTMSF---------------- 846
S+++LKR SP N S G +K+R++EKEG+ Q+ D +S
Sbjct: 168 SARLLKRPSPYNWSECAESCTGNPKKMRSLEKEGQQQKVDAISCRPENRGGKSHVQASLN 227
Query: 847 ----------------YAKDLEANH-AERSACSVGSSGTSNKEE------MVDGTHKLA- 954
+++ + A+ ++ CSVGS ++ +E M+DG+ + A
Sbjct: 228 NHKTGYCQIVRVRSKGFSESVRADDCSDSDVCSVGSCSATSYDESNMPPCMLDGSTQQAD 287
Query: 955 ----------------------------------LDAYYRTMEALRVSGFISWEQEEMIT 1032
L +Y T+ L SG +SWEQE +T
Sbjct: 288 SCSSDAESSCGLGEEPRWKHSSVGDGARNSCRSELYSYRSTLGELFSSGPLSWEQEASLT 347
Query: 1033 NLRLKLNISNDEHLMELRKLVS 1098
+LRL LNIS+DEHLME+R L+S
Sbjct: 348 DLRLSLNISDDEHLMEVRNLIS 369
>ref|XP_002869273.1| agenet domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315109|gb|EFH45532.1| agenet domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 394
Score = 185 bits (470), Expect = 2e-44
Identities = 131/377 (34%), Positives = 181/377 (48%), Gaps = 81/377 (21%)
Frame = +1
Query: 193 MRFFKGDRVEVLTKRDVPSGSWRYGIILSGNGHTYYIRSESATGSSDTTGVPIVERVPRK 372
MRF KG RVEV + ++ P G+WR I+SGNGHTY +R S + ++ERVPRK
Sbjct: 1 MRFRKGSRVEVFSNKEAPYGAWRCAEIVSGNGHTYNVRFYSFQLEHEEA---VMERVPRK 57
Query: 373 AIRPCPPLKSIESWAAGDFVEVFDNSSWKFATVLKVTEFNLFLVKLLGTSQKVKANKSNL 552
IRPCPPL +E W G+ VEV DN SWK ATV + N ++V+LLGT + +K NL
Sbjct: 58 IIRPCPPLLDVEKWETGELVEVLDNFSWKAATVREELSGNYYVVRLLGTPAERTFHKVNL 117
Query: 553 RLPQSWQDGEWIVIQKVSADQPSTRRYLNKSLDKDLKMRHVRDDCSPVESESGLQIPRMV 732
R +SWQD +W+ I K+S S+ L V P + L P V
Sbjct: 118 RARKSWQDEKWVAIGKISGSVKSS----------TLTGSDVYQKLQPHRNNIPLHEPSDV 167
Query: 733 SSKILKRGSPGNLSR------GTN-QKLRAMEKEGRLQRRDTMS---------FYAKDLE 864
S+++LKR SP N S G N +K+R++EKEG+ Q+ D ++ + +
Sbjct: 168 SARMLKRPSPYNWSEFAESCTGNNPKKIRSLEKEGQQQKVDAIACRPEKRGGKSHVQASS 227
Query: 865 ANH------------------------AERSACSVGSSGTSNKEE------MVDGTHKLA 954
NH ++ ACSVGS ++ +E M+DG+ + A
Sbjct: 228 NNHKTDYCQIVRVRSKGFSESVRADDSSDSDACSVGSCSATSYDESNMPPCMLDGSSQQA 287
Query: 955 -----------------------------------LDAYYRTMEALRVSGFISWEQEEMI 1029
L +Y T+ L SG +SWEQE +
Sbjct: 288 DSCSSDAESSCGLGEEPRRKHSSAGDGARRSCRSELYSYRSTLGELFSSGPLSWEQEASL 347
Query: 1030 TNLRLKLNISNDEHLME 1080
T+LRL LNIS+DEHLME
Sbjct: 348 TDLRLSLNISDDEHLME 364
>ref|NP_974660.1| tudor-like RNA-binding protein [Arabidopsis thaliana]
gi|110738311|dbj|BAF01084.1| hypothetical protein
[Arabidopsis thaliana] gi|332660660|gb|AEE86060.1|
tudor-like RNA-binding protein [Arabidopsis thaliana]
Length = 393
Score = 185 bits (469), Expect = 3e-44
Identities = 126/376 (33%), Positives = 182/376 (48%), Gaps = 80/376 (21%)
Frame = +1
Query: 193 MRFFKGDRVEVLTKRDVPSGSWRYGIILSGNGHTYYIRSESATGSSDTTGVPIVERVPRK 372
MR KG RVEV + ++ P G+WR I+SGNGHTY +R S + ++E+VPRK
Sbjct: 1 MRIRKGSRVEVFSNKEAPYGAWRCAEIVSGNGHTYNVRFYSFQIEHEEA---VMEKVPRK 57
Query: 373 AIRPCPPLKSIESWAAGDFVEVFDNSSWKFATVLKVTEFNLFLVKLLGTSQKVKANKSNL 552
IRPCPPL +E W G+ VEV DN SWK ATV + + ++V+LLGT +++ +K NL
Sbjct: 58 IIRPCPPLVDVERWDTGELVEVLDNFSWKAATVREELSGHYYVVRLLGTPEELTFHKVNL 117
Query: 553 RLPQSWQDGEWIVIQKVSADQPSTRRYLNKSLDKDLKMRHVRDDCSPVESESGLQIPRMV 732
R +SWQD W+ I K+S S+ L V P + L P +V
Sbjct: 118 RARKSWQDERWVAIGKISGSLKSS----------TLTGSDVHQKLQPHRNSMPLHEPSVV 167
Query: 733 SSKILKRGSPGNLSR------GTNQKLRAMEKEGRLQRRDTMSF---------------- 846
S+++LKR SP N S G +K+R++EKEG+ Q+ D +S
Sbjct: 168 SARLLKRPSPYNWSECAESCTGNPKKMRSLEKEGQQQKVDAISCRPENRGGKSHVQASLN 227
Query: 847 ----------------YAKDLEANH-AERSACSVGSSGTSNKEE------MVDGTHKLA- 954
+++ + A+ ++ CSVGS ++ +E M+DG+ + A
Sbjct: 228 NHKTGYCQIVRVRSKGFSESVRADDCSDSDVCSVGSCSATSYDESNMPPCMLDGSTQQAD 287
Query: 955 ----------------------------------LDAYYRTMEALRVSGFISWEQEEMIT 1032
L +Y T+ L SG +SWEQE +T
Sbjct: 288 SCSSDAESSCGLGEEPRWKHSSVGDGARNSCRSELYSYRSTLGELFSSGPLSWEQEASLT 347
Query: 1033 NLRLKLNISNDEHLME 1080
+LRL LNIS+DEHLME
Sbjct: 348 DLRLSLNISDDEHLME 363