BLASTX nr result

ID: Coptis24_contig00006493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006493
         (1338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36804.3| unnamed protein product [Vitis vinifera]              160   7e-37
ref|XP_002535702.1| hypothetical protein RCOM_2112970 [Ricinus c...   146   1e-32
ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777...   145   2e-32
ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, par...   140   6e-31
ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   140   6e-31

>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  160 bits (405), Expect = 7e-37
 Identities = 103/234 (44%), Positives = 132/234 (56%), Gaps = 4/234 (1%)
 Frame = +1

Query: 55   EFSEHVNPICSHGDSFQRXXXXXXXXXXXXXXXXKHDDDAESSEARHKLLEIVPADETFN 234
            EF   +  +C+  + F +                + DDDA  SE R   L+ +  DE   
Sbjct: 353  EFENKLGELCNQAEKFNQNKNISPVSQGSLC---EEDDDAIPSEGRGMCLQQLSVDERQR 409

Query: 235  M--IGSSDPKGIDTEALGLLRWLASSQAAEDLNTDDELGYDMILTPLLPKTAIGKILDKA 408
               IG S  K  D EALGLL WLASSQAAED+N+DDEL    IL+PLLP   I K+L+KA
Sbjct: 410  SENIGPSGLKVADNEALGLLSWLASSQAAEDINSDDELVCQTILSPLLPTVTIDKVLEKA 469

Query: 409  NLDYECESQQECQDILDSVLD-PNSCLLKEQALHSTSGNHLTHMPVGNIIPQVDGSSDDL 585
            N+DYE ESQQECQDILDSV D  +   LKE+A  ST  +H     +  +IPQVDGS DD 
Sbjct: 470  NMDYENESQQECQDILDSVEDLADFKGLKERASCSTDHSHSPQTSLEKMIPQVDGSGDDP 529

Query: 586  VTGSVSTSKKDRDGEMGR-SSSRVIQGTNIRCSSGKKKRGRLWGTLPFSMLQKA 744
               S ++S+ +   E  R S  +V+Q T    S+  K+   LWG+LP +  QKA
Sbjct: 530  NDCSGNSSETEMKSETKRFSQHQVLQDTGASFSNKHKRNQSLWGSLPLTTTQKA 583


>ref|XP_002535702.1| hypothetical protein RCOM_2112970 [Ricinus communis]
            gi|223522232|gb|EEF26681.1| hypothetical protein
            RCOM_2112970 [Ricinus communis]
          Length = 459

 Score =  146 bits (368), Expect = 1e-32
 Identities = 106/277 (38%), Positives = 148/277 (53%), Gaps = 5/277 (1%)
 Frame = +1

Query: 238  IGSSDPKGIDTEALGLLRWLASSQAAEDLNTDDELGYDMILTPLLPKTAIGKILDKANLD 417
            IG+ DPK  D EALGLLRWLA+SQAAED+N+DDEL  + IL+PLL  T I K+L+KAN+D
Sbjct: 145  IGTLDPKAADKEALGLLRWLATSQAAEDINSDDELVRETILSPLLQAT-IEKVLEKANMD 203

Query: 418  YECESQQECQDILDSVLDPNSCL-LKEQALHSTSGNHLTHMPVGNIIPQVDGSSDDLVTG 594
            YE ESQ+ECQDILDS+ D       KE+A HS+  +   H    +   Q D     +   
Sbjct: 204  YESESQKECQDILDSIEDLFDLEGSKEKACHSS--DRSIHSQSSSETAQGDALLSSIAKS 261

Query: 595  SVSTSKKDRDGEMGRSSSRVIQGTNIRCSSGKKKRGR-LWGTLPFSMLQKAXXXXXXXXX 771
            S ++S  +   E  R     +  T   C++ K+KR + LWG+LP SM +K          
Sbjct: 262  SRNSSGIEIKDESKRKFRHQVLQTAGTCTTNKRKRKKLLWGSLPISMTEKENDDSEAGGS 321

Query: 772  XXTDVSNEMKDCTTSISSGKEDDEGCEASVTD--AKANDHGLKKQKEVAESSTRDLMRRK 945
                  ++   C   I   +   EG E   +D   K +  G+ +   +  SS RDLMRRK
Sbjct: 322  NI----DKAHVCEVKIYC-RRSIEGNEREYSDDLMKNSGTGICEVGGLVGSSVRDLMRRK 376

Query: 946  RYRRVEASEGGTCRVTNI-STGKEEEKTSLSPKRLEF 1053
            R RR+   +        + S G+ E+   L P++L+F
Sbjct: 377  RCRRIPQQDDNPDGAKKVCSRGEHEQGKVLLPEQLDF 413


>ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
          Length = 2793

 Score =  145 bits (366), Expect = 2e-32
 Identities = 107/299 (35%), Positives = 160/299 (53%), Gaps = 16/299 (5%)
 Frame = +1

Query: 202  LEIVPADE--TFNMIGSSDPKGI-DTEALGLLRWLASSQAAEDLNTDDELGYDMILTPLL 372
            LE++  DE  +  MIG+ D K   D EA  +L+WLA+SQAAED+N+DDEL Y+ ILTPLL
Sbjct: 354  LEMLTMDEIPSSEMIGTLDIKAAADKEAQNILKWLATSQAAEDINSDDELVYETILTPLL 413

Query: 373  PKTAIGKILDKANLDYECESQQECQDILDSVLDPNSCLLKEQALHSTSGNHLTH-MPVG- 546
            P   I K+L++AN+ YE ESQ+ECQDILDS+ D    +L+ +  +    + L H  P+G 
Sbjct: 414  PAATIDKVLEEANIAYENESQKECQDILDSIDD----MLELELPNEKPSHSLDHYCPIGA 469

Query: 547  ---NIIPQVDGSSDDLVTG-----SVSTSKKDRDGEMGRSSSRVIQGTNIRCSSGKKKRG 702
               +++PQVDGS+DD  +      + ++S  + + E  R+S   +       +  K KR 
Sbjct: 470  SSSSMLPQVDGSNDDEFSSPRDSLAGTSSLVEINSEYTRASEHHVLPNTDTSTLIKDKRN 529

Query: 703  RLWGTLPFSMLQKAXXXXXXXXXXXT-DVSNEMKDCTTSISSGKEDDEGCEASVTDAKAN 879
            + WG+LPFS + KA           T    +E  D   S    + +       + +   +
Sbjct: 530  KQWGSLPFSSIDKANNDGEHATLLVTHPFESETGDSAHSNYLNRNEVRNGACFIRNKGRD 589

Query: 880  DHGLKKQKEVAESSTRDLMRRKRYRRVEAS--EGGTCRVTNISTGKEEEKTSLSPKRLE 1050
                K+  ++   S RDLMRRKR  RVE +  E GT +   +    EE+   L  K+L+
Sbjct: 590  ASDSKEVHKLVNCSLRDLMRRKRSYRVEQADCESGTTKKLLLDR-HEEQNACLWQKQLD 647


>ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
          Length = 1591

 Score =  140 bits (354), Expect = 6e-31
 Identities = 93/264 (35%), Positives = 136/264 (51%), Gaps = 6/264 (2%)
 Frame = +1

Query: 262  IDTEALGLLRWLASSQAAEDLNTDDELGYDMILTPLLPKTAIGKILDKANLDYECESQQE 441
            +D EALGLLRWLA+SQAA+D+N+DDEL  + IL PLLP   + ++L++A+ DY  ESQ+E
Sbjct: 489  VDEEALGLLRWLATSQAAQDINSDDELLCETILGPLLPAANMDQVLERASQDYGSESQKE 548

Query: 442  CQDILDSVLDPNSCLLKEQALHSTSGNHLTHMPVGNIIPQVDGSSDDLVTGS----VSTS 609
            CQDILDSV D +      +    T   H         IPQ+DG++DD+ + S     +T 
Sbjct: 549  CQDILDSVEDLDGFEGFNKTKCCTDDEHFFRSSSEETIPQLDGAADDMFSSSGGSTENTP 608

Query: 610  KKDRDGEMGRSSSRVIQGTNIRCSS-GKKKRGRLWGTLPFSMLQKAXXXXXXXXXXXTDV 786
             +D + E  RSS   I   +I   S  +KK    WG+LPF   +K              +
Sbjct: 609  DRDLNVENERSSKLAILLHDIDSGSCSRKKEKSFWGSLPFHEAEKVNTDSRCVNSCRPGI 668

Query: 787  -SNEMKDCTTSISSGKEDDEGCEASVTDAKANDHGLKKQKEVAESSTRDLMRRKRYRRVE 963
             ++  KD         ED    + ++ +A  + +  ++     E S RDLMRRKR  R E
Sbjct: 669  YTSSTKDSEFVSCFSGEDGGQVDVTLQNADTSTYNSREGHLFVERSVRDLMRRKRNYRSE 728

Query: 964  ASEGGTCRVTNISTGKEEEKTSLS 1035
              + G  +  N +    ++K  LS
Sbjct: 729  PLDCGYGKANNFTVDSRQKKVVLS 752


>ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222413
            [Cucumis sativus]
          Length = 2868

 Score =  140 bits (354), Expect = 6e-31
 Identities = 93/264 (35%), Positives = 136/264 (51%), Gaps = 6/264 (2%)
 Frame = +1

Query: 262  IDTEALGLLRWLASSQAAEDLNTDDELGYDMILTPLLPKTAIGKILDKANLDYECESQQE 441
            +D EALGLLRWLA+SQAA+D+N+DDEL  + IL PLLP   + ++L++A+ DY  ESQ+E
Sbjct: 489  VDEEALGLLRWLATSQAAQDINSDDELLCETILGPLLPAANMDQVLERASQDYGSESQKE 548

Query: 442  CQDILDSVLDPNSCLLKEQALHSTSGNHLTHMPVGNIIPQVDGSSDDLVTGS----VSTS 609
            CQDILDSV D +      +    T   H         IPQ+DG++DD+ + S     +T 
Sbjct: 549  CQDILDSVEDLDGFEGFNKTKCCTDDEHFFRSSSEETIPQLDGAADDMFSSSGGSTENTP 608

Query: 610  KKDRDGEMGRSSSRVIQGTNIRCSS-GKKKRGRLWGTLPFSMLQKAXXXXXXXXXXXTDV 786
             +D + E  RSS   I   +I   S  +KK    WG+LPF   +K              +
Sbjct: 609  DRDLNVENERSSKLAILLHDIDSGSCSRKKEKSFWGSLPFHEAEKVNTDSRCVNSCRPGI 668

Query: 787  -SNEMKDCTTSISSGKEDDEGCEASVTDAKANDHGLKKQKEVAESSTRDLMRRKRYRRVE 963
             ++  KD         ED    + ++ +A  + +  ++     E S RDLMRRKR  R E
Sbjct: 669  YTSSTKDSEFVSCFSGEDGGQVDVTLQNADTSTYNSREGHLFVERSVRDLMRRKRNYRSE 728

Query: 964  ASEGGTCRVTNISTGKEEEKTSLS 1035
              + G  +  N +    ++K  LS
Sbjct: 729  PLDCGYGKANNFTVDSRQKKVVLS 752


Top