BLASTX nr result

ID: Coptis24_contig00006482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006482
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238798.1| late embryogenesis abundant protein [Solanum...   121   1e-25
ref|XP_002885103.1| hypothetical protein ARALYDRAFT_479021 [Arab...   120   4e-25
sp|O49817.1|LEA2_CICAR RecName: Full=Late embryogenesis abundant...   119   5e-25
sp|O49816.1|LEA1_CICAR RecName: Full=Late embryogenesis abundant...   118   1e-24
gb|AAY84145.1| late embryogenesis abundant protein [Catharanthus...   114   2e-23

>ref|NP_001238798.1| late embryogenesis abundant protein [Solanum lycopersicum]
           gi|302777019|gb|ADL70200.1| late embryogenesis abundant
           protein [Solanum lycopersicum]
          Length = 171

 Score =  121 bits (304), Expect = 1e-25
 Identities = 69/152 (45%), Positives = 92/152 (60%), Gaps = 8/152 (5%)
 Frame = +3

Query: 75  SQDQSNKAGEAKGQAQEKTGQIMEGLRNNAEAAKNQAFGTAQAAKDTLF----GTTQSAK 242
           S +QS KAGE KGQ Q K GQ +E +++ A+AAK++A  TA +AK T      G  Q+  
Sbjct: 2   SHEQSYKAGETKGQTQVKVGQTLESMKDKAQAAKDKASDTAHSAKGTAHDKTSGAAQATH 61

Query: 243 EKTSETTQAAKDKASDGIRIAGDR----AQETKKQAGGFMNTANNKISETDQSTRDTAQV 410
           +KTS   QA KDKA+   +   D+    AQ TK++A G       K SE  +S ++TAQ 
Sbjct: 62  DKTSGAAQATKDKAAGAAQATKDKTSGAAQATKEKASGAAQATKEKASEMMESAKETAQA 121

Query: 411 GSEKTGGIVQGTVEYVQKAAAGAADSVKQTFG 506
           G EK GGI+Q T + V+  A GAAD+VK TFG
Sbjct: 122 GEEKAGGILQQTGQQVRSIAQGAADAVKHTFG 153


>ref|XP_002885103.1| hypothetical protein ARALYDRAFT_479021 [Arabidopsis lyrata subsp.
           lyrata] gi|297330943|gb|EFH61362.1| hypothetical protein
           ARALYDRAFT_479021 [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score =  120 bits (300), Expect = 4e-25
 Identities = 73/172 (42%), Positives = 98/172 (56%), Gaps = 26/172 (15%)
 Frame = +3

Query: 69  MASQDQSNKAGEAKGQAQEKTGQIMEGLRNNAE-----------AAKNQAFGTAQAAKDT 215
           MAS  QS KAGE +G+AQEKTGQ M  +R+ AE            A+ +A  TAQ+AKD 
Sbjct: 1   MASNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGREKTSQTAQTAQQKAHETAQSAKDK 60

Query: 216 LFGTTQSAKEKTSETTQAAKDKASDGIRIAGDRAQETKKQAGGFMNTANNKISETDQS-- 389
              T Q+A++K  +TTQAAKDKAS      GD+A+E K + G +M+     I    Q   
Sbjct: 61  ASQTAQTAQQKAHDTTQAAKDKASQ----TGDKAREAKDKTGSYMSETGEAIKNKAQDAA 116

Query: 390 -------------TRDTAQVGSEKTGGIVQGTVEYVQKAAAGAADSVKQTFG 506
                        T++TA+ G +KTGG +  T E+V++ A GAAD+VK TFG
Sbjct: 117 QYTKETAQGAAQYTKETAEAGRDKTGGFLSQTGEHVKQMAMGAADAVKHTFG 168


>sp|O49817.1|LEA2_CICAR RecName: Full=Late embryogenesis abundant protein 2; AltName:
           Full=CapLEA-2 gi|2909422|emb|CAA12027.1| LEA PROTEIN
           [Cicer arietinum]
          Length = 155

 Score =  119 bits (299), Expect = 5e-25
 Identities = 68/149 (45%), Positives = 90/149 (60%)
 Frame = +3

Query: 69  MASQDQSNKAGEAKGQAQEKTGQIMEGLRNNAEAAKNQAFGTAQAAKDTLFGTTQSAKEK 248
           M S DQS +AGEAKG+ +EKT Q++  + + A+AAK +A   AQ AKD    T Q+AKEK
Sbjct: 1   MTSHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEK 60

Query: 249 TSETTQAAKDKASDGIRIAGDRAQETKKQAGGFMNTANNKISETDQSTRDTAQVGSEKTG 428
           T +T QAAKDK     +   ++AQ+T          A  K SE  QST++TAQ G + + 
Sbjct: 61  TQQTAQAAKDKTQQTTQATKEKAQDT-------TGRAKEKGSEMGQSTKETAQSGKDNSA 113

Query: 429 GIVQGTVEYVQKAAAGAADSVKQTFGK*N 515
           G +Q T E  +  A GA D+VKQTFG  N
Sbjct: 114 GFLQQTGEKAKGMAQGATDAVKQTFGMTN 142


>sp|O49816.1|LEA1_CICAR RecName: Full=Late embryogenesis abundant protein 1; AltName:
           Full=CapLEA-1 gi|2909420|emb|CAA12026.1| LEA protein
           [Cicer arietinum]
          Length = 177

 Score =  118 bits (296), Expect = 1e-24
 Identities = 71/164 (43%), Positives = 93/164 (56%), Gaps = 15/164 (9%)
 Frame = +3

Query: 69  MASQDQSNKAGEAKGQAQEKTGQIMEGLRNNAEAAKNQAFGTAQAAKDTLFGTTQSAKEK 248
           MAS DQS KAGE  G+ +EKT Q++  + + A+AAK +A   AQ AKD    T Q+AKEK
Sbjct: 1   MASHDQSYKAGETMGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEK 60

Query: 249 TSETTQAAKDKASDGIRIAGDRAQE---------------TKKQAGGFMNTANNKISETD 383
           T +T QAAK+K     + A D  Q+               TK++A      A  K SE  
Sbjct: 61  TQQTAQAAKEKTQQTAQAAKDETQQTAQAAKDKTQQTTEATKEKAQDTTGRAREKGSEMG 120

Query: 384 QSTRDTAQVGSEKTGGIVQGTVEYVQKAAAGAADSVKQTFGK*N 515
           QST++TAQ G + + G +Q T E V+  A GA D+VKQTFG  N
Sbjct: 121 QSTKETAQSGKDNSAGFLQQTGEKVKGMAQGATDAVKQTFGMAN 164


>gb|AAY84145.1| late embryogenesis abundant protein [Catharanthus roseus]
          Length = 163

 Score =  114 bits (286), Expect = 2e-23
 Identities = 70/150 (46%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
 Frame = +3

Query: 69  MASQDQSNKAGEAKGQAQEKTGQIMEGLRNNAEAAKNQAFGTAQAAKDTLFGTTQSAKEK 248
           MAS +QS KAGEAKGQAQEKTGQ+M  ++   + AK++A  TAQ+A+    G  Q  K++
Sbjct: 1   MASHEQSYKAGEAKGQAQEKTGQMMGDVKEKTQQAKDKASETAQSAQ----GRAQEKKDQ 56

Query: 249 T----SETTQAAKDKASDGIRIAGDRAQETKKQAGGFMNTANNKISETDQSTRDTAQVGS 416
           T    S+   AAKDK S+         Q  K++A G       K SE  QS ++TA+ G 
Sbjct: 57  TGSYVSDKAGAAKDKLSE-------TTQSAKERASGAAEATKQKASEMAQSGKETAEAGK 109

Query: 417 EKTGGIVQGTVEYVQKAAAGAADSVKQTFG 506
           EKTGG +Q T E V+  A GAAD+VK TFG
Sbjct: 110 EKTGGFLQKTGEQVKGMAQGAADAVKHTFG 139



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 40/130 (30%), Positives = 62/130 (47%)
 Frame = +3

Query: 57  KKREMASQDQSNKAGEAKGQAQEKTGQIMEGLRNNAEAAKNQAFGTAQAAKDTLFGTTQS 236
           +K + A    S  A  A+G+AQEK  Q    + + A AAK++   T Q+AK+   G  ++
Sbjct: 30  EKTQQAKDKASETAQSAQGRAQEKKDQTGSYVSDKAGAAKDKLSETTQSAKERASGAAEA 89

Query: 237 AKEKTSETTQAAKDKASDGIRIAGDRAQETKKQAGGFMNTANNKISETDQSTRDTAQVGS 416
            K+K SE  Q+ K+ A  G    G   Q+T +Q  G    A + +  T       ++ G 
Sbjct: 90  TKQKASEMAQSGKETAEAGKEKTGGFLQKTGEQVKGMAQGAADAVKHTFGMAE--SEEGF 147

Query: 417 EKTGGIVQGT 446
           E  GG  + T
Sbjct: 148 ENKGGAAEAT 157


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