BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006416
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21323.3| unnamed protein product [Vitis vinifera]              181   4e-44
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   181   4e-44
ref|XP_002512901.1| pentatricopeptide repeat-containing protein,...   181   5e-44
ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43

>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  181 bits (460), Expect = 4e-44
 Identities = 93/145 (64%), Positives = 112/145 (77%)
 Frame = -3

Query: 436 GICFSTVGFGVFIGKFCRVCELDELLRLVEGVKRCVSMINGSVIAVLIIDGLCKVGRVHE 257
           G+  +++GFGVFI +FCR  EL   L L++ V +  S INGS+IA+LII GLC+V RV E
Sbjct: 183 GVPLNSLGFGVFIWRFCRNAELGTTLSLLDEVIKHASEINGSIIALLIIHGLCQVSRVSE 242

Query: 256 ASRVLDELRSRDCKPDFMAYRIVAEAFRAEGEFVETEKVLKRKRKFGVAPRANDYREFLL 77
           A  +L+ELRSR+ KPDFMAYRIV EAFR +G   E EKVLK+KRK GVAPR NDYREF+ 
Sbjct: 243 AFELLEELRSREYKPDFMAYRIVTEAFRLKGSLAEVEKVLKKKRKLGVAPRENDYREFIF 302

Query: 76  NLISEKRIQEAKELGQVIIEGNFAI 2
            LISE+RI EAKELG+VII GNF I
Sbjct: 303 VLISERRIPEAKELGEVIINGNFPI 327


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  181 bits (460), Expect = 4e-44
 Identities = 93/145 (64%), Positives = 112/145 (77%)
 Frame = -3

Query: 436 GICFSTVGFGVFIGKFCRVCELDELLRLVEGVKRCVSMINGSVIAVLIIDGLCKVGRVHE 257
           G+  +++GFGVFI +FCR  EL   L L++ V +  S INGS+IA+LII GLC+V RV E
Sbjct: 183 GVPLNSLGFGVFIWRFCRNAELGTTLSLLDEVIKHASEINGSIIALLIIHGLCQVSRVSE 242

Query: 256 ASRVLDELRSRDCKPDFMAYRIVAEAFRAEGEFVETEKVLKRKRKFGVAPRANDYREFLL 77
           A  +L+ELRSR+ KPDFMAYRIV EAFR +G   E EKVLK+KRK GVAPR NDYREF+ 
Sbjct: 243 AFELLEELRSREYKPDFMAYRIVTEAFRLKGSLAEVEKVLKKKRKLGVAPRENDYREFIF 302

Query: 76  NLISEKRIQEAKELGQVIIEGNFAI 2
            LISE+RI EAKELG+VII GNF I
Sbjct: 303 VLISERRIPEAKELGEVIINGNFPI 327


>ref|XP_002512901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547912|gb|EEF49404.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 655

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/146 (60%), Positives = 115/146 (78%)
 Frame = -3

Query: 439 RGICFSTVGFGVFIGKFCRVCELDELLRLVEGVKRCVSMINGSVIAVLIIDGLCKVGRVH 260
           RG+ F+TVGFGVFI +FCR   L ++L L++ VK   S+INGSVIAVL++ GLC+  RV+
Sbjct: 184 RGVAFNTVGFGVFIWRFCRDANLSKVLNLLDQVKEGNSVINGSVIAVLVVHGLCQASRVN 243

Query: 259 EASRVLDELRSRDCKPDFMAYRIVAEAFRAEGEFVETEKVLKRKRKFGVAPRANDYREFL 80
           EA  VL+ELR R+CKPDFMAYRIVAEAFR  G   +  KVLK KRK GVAPR+NDYR+F+
Sbjct: 244 EALWVLNELRIRNCKPDFMAYRIVAEAFRLSGSSADINKVLKMKRKLGVAPRSNDYRDFI 303

Query: 79  LNLISEKRIQEAKELGQVIIEGNFAI 2
           L+LI+++ + E KE+G+VI+ G+F I
Sbjct: 304 LSLIAKRLVLEVKEIGEVIVHGDFPI 329


>ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|222869847|gb|EEF06978.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  178 bits (451), Expect = 5e-43
 Identities = 92/144 (63%), Positives = 112/144 (77%)
 Frame = -3

Query: 439 RGICFSTVGFGVFIGKFCRVCELDELLRLVEGVKRCVSMINGSVIAVLIIDGLCKVGRVH 260
           RGI FST+GFGVFI + CR  +L E+LRLV+ V+   S+INGSVIAVLI+ GLC+  R  
Sbjct: 182 RGIGFSTIGFGVFIWRLCRNGDLGEVLRLVDEVEGRNSLINGSVIAVLIVHGLCEGSRTS 241

Query: 259 EASRVLDELRSRDCKPDFMAYRIVAEAFRAEGEFVETEKVLKRKRKFGVAPRANDYREFL 80
           EA R L+ELR R  KPDF+AYR+VAEAFR+ G   +  +VLK KRK GVAPR+NDYREF+
Sbjct: 242 EALRALNELRIRGWKPDFIAYRVVAEAFRSLGSVFDVNEVLKMKRKLGVAPRSNDYREFI 301

Query: 79  LNLISEKRIQEAKELGQVIIEGNF 8
           L LI+E+RI EAKELG+VI  GNF
Sbjct: 302 LGLITERRIYEAKELGEVIASGNF 325


>ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|222845900|gb|EEE83447.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  178 bits (451), Expect = 5e-43
 Identities = 92/144 (63%), Positives = 112/144 (77%)
 Frame = -3

Query: 439 RGICFSTVGFGVFIGKFCRVCELDELLRLVEGVKRCVSMINGSVIAVLIIDGLCKVGRVH 260
           RGI FST+GFGVFI + CR  +L E+LRLV+ V+   S+INGSVIAVLI+ GLC+  R  
Sbjct: 182 RGIGFSTIGFGVFIWRLCRNGDLGEVLRLVDEVEGRNSLINGSVIAVLIVHGLCEGSRTS 241

Query: 259 EASRVLDELRSRDCKPDFMAYRIVAEAFRAEGEFVETEKVLKRKRKFGVAPRANDYREFL 80
           EA R L+ELR R  KPDF+AYR+VAEAFR+ G   +  +VLK KRK GVAPR+NDYREF+
Sbjct: 242 EALRALNELRIRGWKPDFIAYRVVAEAFRSLGSVFDVNEVLKMKRKLGVAPRSNDYREFI 301

Query: 79  LNLISEKRIQEAKELGQVIIEGNF 8
           L LI+E+RI EAKELG+VI  GNF
Sbjct: 302 LGLITERRIYEAKELGEVIASGNF 325