BLASTX nr result

ID: Coptis24_contig00006406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006406
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAL64059.1| putative G-protein coupled receptor [Lotus japon...   148   2e-44
ref|XP_002281957.1| PREDICTED: G-protein coupled receptor 1 [Vit...   146   2e-43
ref|XP_003550219.1| PREDICTED: G-protein coupled receptor 1-like...   144   3e-43
dbj|BAJ33975.1| unnamed protein product [Thellungiella halophila]     141   5e-43
ref|NP_175261.1| G-protein-coupled receptor 1 [Arabidopsis thali...   141   5e-43

>emb|CAL64059.1| putative G-protein coupled receptor [Lotus japonicus]
          Length = 319

 Score =  148 bits (373), Expect(2) = 2e-44
 Identities = 68/81 (83%), Positives = 73/81 (90%)
 Frame = -3

Query: 278 KNSRKFSFKLVFFLALSDMPCSFFNIIGDPSQGIFCYA*GYSAHFFCVASLLWTTTIAFT 99
           K  RKFSFKLVF+LALSDM CSFFN+IGDPSQG FCYA GYS HFFCVAS LWTTTIAFT
Sbjct: 45  KELRKFSFKLVFYLALSDMLCSFFNVIGDPSQGFFCYAQGYSTHFFCVASFLWTTTIAFT 104

Query: 98  LHRTVVRHKTDVEDMEPLFHL 36
           LHRTVV+HKTDVED+E +FHL
Sbjct: 105 LHRTVVKHKTDVEDLEAMFHL 125



 Score = 55.8 bits (133), Expect(2) = 2e-44
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -2

Query: 387 GNLTANDRHI*TSLNTGASTLSFAGSTFIVLFYVLFKELKK 265
           G LTA+DR I T++N GAS+LS AGS+FIVL Y+LFKEL+K
Sbjct: 9   GALTAHDRWILTAVNAGASSLSLAGSSFIVLCYLLFKELRK 49


>ref|XP_002281957.1| PREDICTED: G-protein coupled receptor 1 [Vitis vinifera]
           gi|296081730|emb|CBI20735.3| unnamed protein product
           [Vitis vinifera]
          Length = 319

 Score =  146 bits (369), Expect(2) = 2e-43
 Identities = 68/81 (83%), Positives = 73/81 (90%)
 Frame = -3

Query: 278 KNSRKFSFKLVFFLALSDMPCSFFNIIGDPSQGIFCYA*GYSAHFFCVASLLWTTTIAFT 99
           K  RKFSFKLVF+LALSDM CSFF+IIGDPSQG FCYA GY+ HFFCVAS LWTTTIAFT
Sbjct: 44  KELRKFSFKLVFYLALSDMLCSFFSIIGDPSQGFFCYAQGYTTHFFCVASFLWTTTIAFT 103

Query: 98  LHRTVVRHKTDVEDMEPLFHL 36
           LHRTVVRHKTDVED+E +FHL
Sbjct: 104 LHRTVVRHKTDVEDLESMFHL 124



 Score = 54.3 bits (129), Expect(2) = 2e-43
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -2

Query: 387 GNLTANDRHI*TSLNTGASTLSFAGSTFIVLFYVLFKELKK 265
           GNL A+DR I  ++N GAS+LSF GS FIVL Y+LFKEL+K
Sbjct: 8   GNLAAHDRQILQAVNGGASSLSFVGSGFIVLCYLLFKELRK 48


>ref|XP_003550219.1| PREDICTED: G-protein coupled receptor 1-like [Glycine max]
          Length = 318

 Score =  144 bits (364), Expect(2) = 3e-43
 Identities = 67/81 (82%), Positives = 72/81 (88%)
 Frame = -3

Query: 278 KNSRKFSFKLVFFLALSDMPCSFFNIIGDPSQGIFCYA*GYSAHFFCVASLLWTTTIAFT 99
           K  RKFSFKLVF+LALSDM CSFF IIGDPS+G FCYA GYS HFFCVAS LWTTTIAFT
Sbjct: 45  KELRKFSFKLVFYLALSDMLCSFFGIIGDPSKGFFCYAQGYSTHFFCVASFLWTTTIAFT 104

Query: 98  LHRTVVRHKTDVEDMEPLFHL 36
           LHRTVV+HKTDVED+E +FHL
Sbjct: 105 LHRTVVKHKTDVEDLEAMFHL 125



 Score = 55.5 bits (132), Expect(2) = 3e-43
 Identities = 27/41 (65%), Positives = 35/41 (85%)
 Frame = -2

Query: 387 GNLTANDRHI*TSLNTGASTLSFAGSTFIVLFYVLFKELKK 265
           G LTA+DR I T++N GAS+LS AGS+FIV+ Y+LFKEL+K
Sbjct: 9   GALTAHDRRILTAVNVGASSLSLAGSSFIVVCYLLFKELRK 49


>dbj|BAJ33975.1| unnamed protein product [Thellungiella halophila]
          Length = 328

 Score =  141 bits (355), Expect(2) = 5e-43
 Identities = 66/85 (77%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
 Frame = -3

Query: 287 FCL-KNSRKFSFKLVFFLALSDMPCSFFNIIGDPSQGIFCYA*GYSAHFFCVASLLWTTT 111
           +CL K  RKFSFKLVF+LALSDM CSFF I+GDPS+G  CYA GY+ HFFCVAS LWTTT
Sbjct: 41  YCLFKELRKFSFKLVFYLALSDMLCSFFLIVGDPSKGFICYAQGYTTHFFCVASFLWTTT 100

Query: 110 IAFTLHRTVVRHKTDVEDMEPLFHL 36
           IAFTLHRTVV+HKTDVED+E +FHL
Sbjct: 101 IAFTLHRTVVKHKTDVEDLEAMFHL 125



 Score = 58.5 bits (140), Expect(2) = 5e-43
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = -2

Query: 387 GNLTANDRHI*TSLNTGASTLSFAGSTFIVLFYVLFKELKK 265
           G LTA DR I T++NTGAS+LSF GS FIVL Y LFKEL+K
Sbjct: 9   GGLTAGDRSIITAINTGASSLSFVGSAFIVLCYCLFKELRK 49


>ref|NP_175261.1| G-protein-coupled receptor 1 [Arabidopsis thaliana]
           gi|75219002|sp|O04714.1|GCR1_ARATH RecName:
           Full=G-protein coupled receptor 1
           gi|5733881|gb|AAD49769.1|AC007932_17 Identical to a
           putative G-protein-coupled receptor from Arabidopsis
           thaliana gb|U95143. EST gb|T04329 comes from this gene
           [Arabidopsis thaliana] gi|2072986|gb|AAC49961.1|
           putative G-protein-coupled receptor [Arabidopsis
           thaliana] gi|2072988|gb|AAC49962.1| putative
           G-protein-coupled receptor [Arabidopsis thaliana]
           gi|110736896|dbj|BAF00405.1| putative G-protein-coupled
           receptor [Arabidopsis thaliana]
           gi|332194149|gb|AEE32270.1| G-protein-coupled receptor 1
           [Arabidopsis thaliana]
          Length = 326

 Score =  141 bits (355), Expect(2) = 5e-43
 Identities = 66/85 (77%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
 Frame = -3

Query: 287 FCL-KNSRKFSFKLVFFLALSDMPCSFFNIIGDPSQGIFCYA*GYSAHFFCVASLLWTTT 111
           +CL K  RKFSFKLVF+LALSDM CSFF I+GDPS+G  CYA GY+ HFFCVAS LWTTT
Sbjct: 41  YCLFKELRKFSFKLVFYLALSDMLCSFFLIVGDPSKGFICYAQGYTTHFFCVASFLWTTT 100

Query: 110 IAFTLHRTVVRHKTDVEDMEPLFHL 36
           IAFTLHRTVV+HKTDVED+E +FHL
Sbjct: 101 IAFTLHRTVVKHKTDVEDLEAMFHL 125



 Score = 58.5 bits (140), Expect(2) = 5e-43
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = -2

Query: 387 GNLTANDRHI*TSLNTGASTLSFAGSTFIVLFYVLFKELKK 265
           G LTA DR I T++NTGAS+LSF GS FIVL Y LFKEL+K
Sbjct: 9   GGLTAGDRSIITAINTGASSLSFVGSAFIVLCYCLFKELRK 49


Top