BLASTX nr result

ID: Coptis24_contig00006393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006393
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20154.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine...   114   8e-24
ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine...   114   8e-24
ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|22353...   114   1e-23
ref|NP_175749.1| putative LRR receptor-like serine/threonine-pro...   113   2e-23

>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/124 (45%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
 Frame = -3

Query: 376 NNTLTGPISQWLSETRYNFDISYNNFNGTSETSCPANNNLNAISSFPAQPASSVDWCLKK 197
           NN+L+G +  W+S++   FD+SYNNF G S  +      +N +SSF +  ++SV WCLKK
Sbjct: 500 NNSLSGTLPSWISDSNQKFDVSYNNFTGPSSLTVCQQRAVNLVSSFSSSDSNSVLWCLKK 559

Query: 196 NLPCPGKSKYYNLFVNCGGSKL----EQYERDFDVMGPSSFL-FTDKWACSTTGDYLGND 32
            LPCPG +K+Y+LF+NCGGS++      YERD D  G S F  +++KW  S+TG +  ND
Sbjct: 560 GLPCPGNAKHYSLFINCGGSEINYEGNDYERDLDGSGASHFSDYSEKWGYSSTGVFTNND 619

Query: 31  KATF 20
            A +
Sbjct: 620 DAAY 623


>ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like, partial [Cucumis sativus]
          Length = 993

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/124 (41%), Positives = 83/124 (66%), Gaps = 5/124 (4%)
 Frame = -3

Query: 376 NNTLTGPISQWLSETRYNFDISYNNFNGTSETSCPANNNLNAISSFPAQPASSVDWCLKK 197
           NN+L+G +  W+  ++ N D+SYNNF+G++  SC   + +N I+S+P      V WCLKK
Sbjct: 301 NNSLSGEVPGWILSSKKNIDLSYNNFSGSTLASCQ-QSPVNLIASYPPATNHQVPWCLKK 359

Query: 196 NLPCPGKSKYYNLFVNCGGSKL----EQYERDFDVMGPSSFL-FTDKWACSTTGDYLGND 32
           +LPC GK++Y++LF+NCGG+++      YE D    G S+F   ++KWA S+TG +LG++
Sbjct: 360 DLPCSGKAEYHSLFINCGGTRVTADGHDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDE 419

Query: 31  KATF 20
            A +
Sbjct: 420 NADY 423


>ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like [Cucumis sativus]
          Length = 1030

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/124 (41%), Positives = 83/124 (66%), Gaps = 5/124 (4%)
 Frame = -3

Query: 376 NNTLTGPISQWLSETRYNFDISYNNFNGTSETSCPANNNLNAISSFPAQPASSVDWCLKK 197
           NN+L+G +  W+  ++ N D+SYNNF+G++  SC   + +N I+S+P      V WCLKK
Sbjct: 338 NNSLSGEVPGWILSSKKNIDLSYNNFSGSTLASCQ-QSPVNLIASYPPATNHQVPWCLKK 396

Query: 196 NLPCPGKSKYYNLFVNCGGSKL----EQYERDFDVMGPSSFL-FTDKWACSTTGDYLGND 32
           +LPC GK++Y++LF+NCGG+++      YE D    G S+F   ++KWA S+TG +LG++
Sbjct: 397 DLPCSGKAEYHSLFINCGGTRVTADGHDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDE 456

Query: 31  KATF 20
            A +
Sbjct: 457 NADY 460


>ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|223536184|gb|EEF37837.1|
           kinase, putative [Ricinus communis]
          Length = 897

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/124 (45%), Positives = 78/124 (62%), Gaps = 5/124 (4%)
 Frame = -3

Query: 376 NNTLTGPISQWLSETRYNFDISYNNFNGTSETSCPANNNLNAISSFPAQPASSVDWCLKK 197
           NN+LTG I  W+  T  N+D+SYNNF GT  TSC     +N +SS  +  +S   WCL+K
Sbjct: 341 NNSLTGEIPSWILRTSKNYDLSYNNFTGTVSTSC-QQPEVNLVSSQLSSASSETAWCLRK 399

Query: 196 NLPCPGKSKYYNLFVNCGGSKL----EQYERDFDVMGPSSFL-FTDKWACSTTGDYLGND 32
           +L C G  ++++LF+NCGG KL     +YE D     PSSF+  +++WA S+TG Y+ ND
Sbjct: 400 DLTCSGDPEHHSLFINCGGPKLTFENNEYEEDLTRGSPSSFISVSERWAYSSTGAYMNND 459

Query: 31  KATF 20
            A F
Sbjct: 460 GAEF 463


>ref|NP_175749.1| putative LRR receptor-like serine/threonine-protein kinase
           [Arabidopsis thaliana]
           gi|264664588|sp|C0LGG9.2|Y5344_ARATH RecName:
           Full=Probable LRR receptor-like serine/threonine-protein
           kinase At1g53440; Flags: Precursor
           gi|332194820|gb|AEE32941.1| putative LRR receptor-like
           serine/threonine-protein kinase [Arabidopsis thaliana]
          Length = 1035

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/124 (42%), Positives = 85/124 (68%), Gaps = 5/124 (4%)
 Frame = -3

Query: 376 NNTLTGPISQWLSETRYNFDISYNNFNGTSETSCPANNNLNAISSFPAQPASSVDWCLKK 197
           NN+LTGP+ Q++ +++ N D+SYNNF      SC    ++N ISS+P+   +SV WCL+K
Sbjct: 337 NNSLTGPVPQFILDSKQNIDLSYNNFTQPPTLSCN-QLDVNLISSYPSVTNNSVQWCLRK 395

Query: 196 NLPCPGKSKYYNLFVNCGGSKL----EQYERDFDVMGPSSF-LFTDKWACSTTGDYLGND 32
           +LPCPG + + +LF+NCGG++L    ++Y  D +  G S+F   +++W  S++G +LGND
Sbjct: 396 DLPCPGDAHHSSLFINCGGNRLKVDKDEYADDLNKRGASTFSSVSERWGYSSSGAWLGND 455

Query: 31  KATF 20
            AT+
Sbjct: 456 GATY 459


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