BLASTX nr result

ID: Coptis24_contig00006332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006332
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284262.2| PREDICTED: membrane-anchored ubiquitin-fold ...    76   2e-12
emb|CBI22285.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_002526078.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
gb|AFK43731.1| unknown [Lotus japonicus]                               72   4e-11

>ref|XP_002284262.2| PREDICTED: membrane-anchored ubiquitin-fold protein 2 [Vitis
           vinifera]
          Length = 132

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = +1

Query: 271 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKE 405
           MS  QD L+IKFRLTDGSDIGPK+F+ ATSVATLKE+++AQWPKE
Sbjct: 1   MSGVQDQLEIKFRLTDGSDIGPKSFSAATSVATLKENVLAQWPKE 45


>emb|CBI22285.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = +1

Query: 271 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKE 405
           MS  QD L+IKFRLTDGSDIGPK+F+ ATSVATLKE+++AQWPKE
Sbjct: 1   MSGVQDQLEIKFRLTDGSDIGPKSFSAATSVATLKENVLAQWPKE 45


>ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|222867095|gb|EEF04226.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/45 (80%), Positives = 40/45 (88%)
 Frame = +1

Query: 271 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKE 405
           M+  QD L+IKFRLTDGSDIGPKTF  ATSVATLKE+I+AQWPKE
Sbjct: 1   MAVVQDQLEIKFRLTDGSDIGPKTFPAATSVATLKENILAQWPKE 45


>ref|XP_002526078.1| conserved hypothetical protein [Ricinus communis]
           gi|223534575|gb|EEF36272.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 113

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/45 (80%), Positives = 40/45 (88%)
 Frame = +1

Query: 271 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKE 405
           M+  Q+ L+IKFRLTDGSDIGPKTF  ATSVATLKESI+AQWPKE
Sbjct: 1   MAAVQNQLEIKFRLTDGSDIGPKTFPAATSVATLKESILAQWPKE 45


>gb|AFK43731.1| unknown [Lotus japonicus]
          Length = 117

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +1

Query: 271 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKE 405
           M+ T++  +IKFRLTDGSDIGPK+F  ATS+ATLKESI+AQWPK+
Sbjct: 1   MAGTEEQFEIKFRLTDGSDIGPKSFAAATSIATLKESILAQWPKD 45


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