BLASTX nr result
ID: Coptis24_contig00006332
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00006332 (407 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284262.2| PREDICTED: membrane-anchored ubiquitin-fold ... 76 2e-12 emb|CBI22285.3| unnamed protein product [Vitis vinifera] 76 2e-12 ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|2... 76 2e-12 ref|XP_002526078.1| conserved hypothetical protein [Ricinus comm... 76 3e-12 gb|AFK43731.1| unknown [Lotus japonicus] 72 4e-11 >ref|XP_002284262.2| PREDICTED: membrane-anchored ubiquitin-fold protein 2 [Vitis vinifera] Length = 132 Score = 76.3 bits (186), Expect = 2e-12 Identities = 35/45 (77%), Positives = 41/45 (91%) Frame = +1 Query: 271 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKE 405 MS QD L+IKFRLTDGSDIGPK+F+ ATSVATLKE+++AQWPKE Sbjct: 1 MSGVQDQLEIKFRLTDGSDIGPKSFSAATSVATLKENVLAQWPKE 45 >emb|CBI22285.3| unnamed protein product [Vitis vinifera] Length = 117 Score = 76.3 bits (186), Expect = 2e-12 Identities = 35/45 (77%), Positives = 41/45 (91%) Frame = +1 Query: 271 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKE 405 MS QD L+IKFRLTDGSDIGPK+F+ ATSVATLKE+++AQWPKE Sbjct: 1 MSGVQDQLEIKFRLTDGSDIGPKSFSAATSVATLKENVLAQWPKE 45 >ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|222867095|gb|EEF04226.1| predicted protein [Populus trichocarpa] Length = 117 Score = 76.3 bits (186), Expect = 2e-12 Identities = 36/45 (80%), Positives = 40/45 (88%) Frame = +1 Query: 271 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKE 405 M+ QD L+IKFRLTDGSDIGPKTF ATSVATLKE+I+AQWPKE Sbjct: 1 MAVVQDQLEIKFRLTDGSDIGPKTFPAATSVATLKENILAQWPKE 45 >ref|XP_002526078.1| conserved hypothetical protein [Ricinus communis] gi|223534575|gb|EEF36272.1| conserved hypothetical protein [Ricinus communis] Length = 113 Score = 75.9 bits (185), Expect = 3e-12 Identities = 36/45 (80%), Positives = 40/45 (88%) Frame = +1 Query: 271 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKE 405 M+ Q+ L+IKFRLTDGSDIGPKTF ATSVATLKESI+AQWPKE Sbjct: 1 MAAVQNQLEIKFRLTDGSDIGPKTFPAATSVATLKESILAQWPKE 45 >gb|AFK43731.1| unknown [Lotus japonicus] Length = 117 Score = 72.4 bits (176), Expect = 4e-11 Identities = 32/45 (71%), Positives = 40/45 (88%) Frame = +1 Query: 271 MSKTQDPLDIKFRLTDGSDIGPKTFTPATSVATLKESIIAQWPKE 405 M+ T++ +IKFRLTDGSDIGPK+F ATS+ATLKESI+AQWPK+ Sbjct: 1 MAGTEEQFEIKFRLTDGSDIGPKSFAAATSIATLKESILAQWPKD 45