BLASTX nr result
ID: Coptis24_contig00006302
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00006302
(3509 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor... 1355 0.0
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor... 1355 0.0
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera] 1354 0.0
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor... 1348 0.0
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu... 1346 0.0
>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Vitis vinifera]
Length = 1172
Score = 1355 bits (3507), Expect = 0.0
Identities = 684/787 (86%), Positives = 720/787 (91%)
Frame = +1
Query: 223 SNEPELLMVYAGKVSRVMETGCFVQLNDFRGKEGLVHVSQLASRRIPNAKDVVKRGQDVF 402
S+EPEL VY G+VSRVM+TGCFVQLND +GKEGLVHVSQ+A+RR+ NAKDVVKR Q+V+
Sbjct: 214 SDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQIATRRVGNAKDVVKRDQEVY 273
Query: 403 VKVISMTGQKMSLSMRDVDQTTGKDLIPMKKRPDDDASRVNPQSSNQGPTSRTGLSGIRI 582
VKVIS++GQK+SLSMRDVDQ TG+DLIP+KK +DDA R NP +NQGP SRTGLSGIRI
Sbjct: 274 VKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRTNPSGANQGPVSRTGLSGIRI 333
Query: 583 TEDDGPSSSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXXXX 762
E++ + SRRPLKRMSSPEKWEAKQL+A+GV+DIRE PMYD++ DG
Sbjct: 334 VEENDAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEELE 393
Query: 763 XXXXXXXPAFLQGQSRYSIDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXXXXXXXTML 942
PAFLQGQSRYS+DMSPVKIFKNPEG IK TML
Sbjct: 394 IEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTML 453
Query: 943 DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRTKLSIQ 1122
DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GKALTFGQR+KLSIQ
Sbjct: 454 DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQ 513
Query: 1123 EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR 1302
EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR
Sbjct: 514 EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR 573
Query: 1303 RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREILIDENLSQY 1482
RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREILID+NLSQY
Sbjct: 574 RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQY 633
Query: 1483 SVIMLDEAHERTIHTDVLFGLLKQLVQRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPG 1662
SVIMLDEAHERTIHTDVLFGLLK LV+RRP+LRLIVTSATLDAEKFSGYFFNCNIFTIPG
Sbjct: 634 SVIMLDEAHERTIHTDVLFGLLKHLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPG 693
Query: 1663 RTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKG 1842
RTFPVEILYTKQPESDYLDA+LITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKG
Sbjct: 694 RTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKG 753
Query: 1843 LGKSVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGF 2022
LGK+VPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGF
Sbjct: 754 LGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGF 813
Query: 2023 AKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPE 2202
AKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPE
Sbjct: 814 AKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPE 873
Query: 2203 IQRINLGATTLQMKAMGINDLLSFDFMDPPSPQALITAMEQLYSLGALDDEGLLTKLGRK 2382
IQRINLG TTL MKAMGINDLLSFDFMDPPSPQALI+AMEQLYSLGALD+EGLLTKLGRK
Sbjct: 874 IQRINLGLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRK 933
Query: 2383 MAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAMADQKRAKFFQPE 2562
MAEFPL+PPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQA ADQKRAKFFQPE
Sbjct: 934 MAEFPLEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE 993
Query: 2563 GDHLTLL 2583
GDHLTLL
Sbjct: 994 GDHLTLL 1000
Score = 286 bits (731), Expect = 4e-74
Identities = 135/144 (93%), Positives = 142/144 (98%)
Frame = +3
Query: 2709 AQDVRKQLLTIMDRYKLDVLTAGKNFTKIRQAIAAGFFFHAARKDPQEGYKTLVENQPVY 2888
AQDVRKQLLTIMD+YKLDV++AGKNFTKIR+AI AGFFFHAARKDPQEGY+TLVENQPVY
Sbjct: 1029 AQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1088
Query: 2889 IHPSSALFQRQPDWVLYHELVMTTKEYMREVTAIDPKWLVELAPRFFKVADPTKMSKRKR 3068
IHPSSALFQRQPDWV+YHELVMTTKEYMREVT IDPKWLVELAPRFFKVADPTKMSKRKR
Sbjct: 1089 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR 1148
Query: 3069 QERVEPLYDRYHEPNSWRLSKRRA 3140
QER+EPLYDRYHEPNSWRLSKRRA
Sbjct: 1149 QERIEPLYDRYHEPNSWRLSKRRA 1172
>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform 2 [Vitis vinifera]
Length = 1175
Score = 1355 bits (3507), Expect = 0.0
Identities = 684/787 (86%), Positives = 720/787 (91%)
Frame = +1
Query: 223 SNEPELLMVYAGKVSRVMETGCFVQLNDFRGKEGLVHVSQLASRRIPNAKDVVKRGQDVF 402
S+EPEL VY G+VSRVM+TGCFVQLND +GKEGLVHVSQ+A+RR+ NAKDVVKR Q+V+
Sbjct: 217 SDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQIATRRVGNAKDVVKRDQEVY 276
Query: 403 VKVISMTGQKMSLSMRDVDQTTGKDLIPMKKRPDDDASRVNPQSSNQGPTSRTGLSGIRI 582
VKVIS++GQK+SLSMRDVDQ TG+DLIP+KK +DDA R NP +NQGP SRTGLSGIRI
Sbjct: 277 VKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRTNPSGANQGPVSRTGLSGIRI 336
Query: 583 TEDDGPSSSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXXXX 762
E++ + SRRPLKRMSSPEKWEAKQL+A+GV+DIRE PMYD++ DG
Sbjct: 337 VEENDAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEELE 396
Query: 763 XXXXXXXPAFLQGQSRYSIDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXXXXXXXTML 942
PAFLQGQSRYS+DMSPVKIFKNPEG IK TML
Sbjct: 397 IEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTML 456
Query: 943 DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRTKLSIQ 1122
DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GKALTFGQR+KLSIQ
Sbjct: 457 DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQ 516
Query: 1123 EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR 1302
EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR
Sbjct: 517 EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR 576
Query: 1303 RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREILIDENLSQY 1482
RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREILID+NLSQY
Sbjct: 577 RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQY 636
Query: 1483 SVIMLDEAHERTIHTDVLFGLLKQLVQRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPG 1662
SVIMLDEAHERTIHTDVLFGLLK LV+RRP+LRLIVTSATLDAEKFSGYFFNCNIFTIPG
Sbjct: 637 SVIMLDEAHERTIHTDVLFGLLKHLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPG 696
Query: 1663 RTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKG 1842
RTFPVEILYTKQPESDYLDA+LITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKG
Sbjct: 697 RTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKG 756
Query: 1843 LGKSVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGF 2022
LGK+VPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGF
Sbjct: 757 LGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGF 816
Query: 2023 AKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPE 2202
AKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPE
Sbjct: 817 AKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPE 876
Query: 2203 IQRINLGATTLQMKAMGINDLLSFDFMDPPSPQALITAMEQLYSLGALDDEGLLTKLGRK 2382
IQRINLG TTL MKAMGINDLLSFDFMDPPSPQALI+AMEQLYSLGALD+EGLLTKLGRK
Sbjct: 877 IQRINLGLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRK 936
Query: 2383 MAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAMADQKRAKFFQPE 2562
MAEFPL+PPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQA ADQKRAKFFQPE
Sbjct: 937 MAEFPLEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE 996
Query: 2563 GDHLTLL 2583
GDHLTLL
Sbjct: 997 GDHLTLL 1003
Score = 286 bits (731), Expect = 4e-74
Identities = 135/144 (93%), Positives = 142/144 (98%)
Frame = +3
Query: 2709 AQDVRKQLLTIMDRYKLDVLTAGKNFTKIRQAIAAGFFFHAARKDPQEGYKTLVENQPVY 2888
AQDVRKQLLTIMD+YKLDV++AGKNFTKIR+AI AGFFFHAARKDPQEGY+TLVENQPVY
Sbjct: 1032 AQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1091
Query: 2889 IHPSSALFQRQPDWVLYHELVMTTKEYMREVTAIDPKWLVELAPRFFKVADPTKMSKRKR 3068
IHPSSALFQRQPDWV+YHELVMTTKEYMREVT IDPKWLVELAPRFFKVADPTKMSKRKR
Sbjct: 1092 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR 1151
Query: 3069 QERVEPLYDRYHEPNSWRLSKRRA 3140
QER+EPLYDRYHEPNSWRLSKRRA
Sbjct: 1152 QERIEPLYDRYHEPNSWRLSKRRA 1175
>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
Length = 1162
Score = 1354 bits (3505), Expect = 0.0
Identities = 684/787 (86%), Positives = 719/787 (91%)
Frame = +1
Query: 223 SNEPELLMVYAGKVSRVMETGCFVQLNDFRGKEGLVHVSQLASRRIPNAKDVVKRGQDVF 402
S+EPEL VY G+VSRVM+TGCFVQLND +GKEGLVHVSQ+A+RR+ NAKDVVKR Q+V+
Sbjct: 226 SDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQIATRRVGNAKDVVKRDQEVY 285
Query: 403 VKVISMTGQKMSLSMRDVDQTTGKDLIPMKKRPDDDASRVNPQSSNQGPTSRTGLSGIRI 582
VKVIS++GQK+SLSMRDVDQ TG+DLIP+KK +DDA R NP NQGP SRTGLSGIRI
Sbjct: 286 VKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRTNPSGXNQGPVSRTGLSGIRI 345
Query: 583 TEDDGPSSSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXXXX 762
E++ + SRRPLKRMSSPEKWEAKQL+A+GV+DIRE PMYD++ DG
Sbjct: 346 VEENDAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEELE 405
Query: 763 XXXXXXXPAFLQGQSRYSIDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXXXXXXXTML 942
PAFLQGQSRYS+DMSPVKIFKNPEG IK TML
Sbjct: 406 IEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTML 465
Query: 943 DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRTKLSIQ 1122
DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GKALTFGQR+KLSIQ
Sbjct: 466 DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQ 525
Query: 1123 EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR 1302
EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR
Sbjct: 526 EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR 585
Query: 1303 RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREILIDENLSQY 1482
RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREILID+NLSQY
Sbjct: 586 RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQY 645
Query: 1483 SVIMLDEAHERTIHTDVLFGLLKQLVQRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPG 1662
SVIMLDEAHERTIHTDVLFGLLK LV+RRP+LRLIVTSATLDAEKFSGYFFNCNIFTIPG
Sbjct: 646 SVIMLDEAHERTIHTDVLFGLLKHLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPG 705
Query: 1663 RTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKG 1842
RTFPVEILYTKQPESDYLDA+LITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKG
Sbjct: 706 RTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMKG 765
Query: 1843 LGKSVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGF 2022
LGK+VPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGF
Sbjct: 766 LGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGF 825
Query: 2023 AKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPE 2202
AKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPE
Sbjct: 826 AKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPE 885
Query: 2203 IQRINLGATTLQMKAMGINDLLSFDFMDPPSPQALITAMEQLYSLGALDDEGLLTKLGRK 2382
IQRINLG TTL MKAMGINDLLSFDFMDPPSPQALI+AMEQLYSLGALD+EGLLTKLGRK
Sbjct: 886 IQRINLGLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRK 945
Query: 2383 MAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAMADQKRAKFFQPE 2562
MAEFPL+PPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQA ADQKRAKFFQPE
Sbjct: 946 MAEFPLEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE 1005
Query: 2563 GDHLTLL 2583
GDHLTLL
Sbjct: 1006 GDHLTLL 1012
Score = 261 bits (667), Expect = 9e-67
Identities = 122/130 (93%), Positives = 128/130 (98%)
Frame = +3
Query: 2751 YKLDVLTAGKNFTKIRQAIAAGFFFHAARKDPQEGYKTLVENQPVYIHPSSALFQRQPDW 2930
YKLDV++AGKNFTKIR+AI AGFFFHAARKDPQEGY+TLVENQPVYIHPSSALFQRQPDW
Sbjct: 1033 YKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW 1092
Query: 2931 VLYHELVMTTKEYMREVTAIDPKWLVELAPRFFKVADPTKMSKRKRQERVEPLYDRYHEP 3110
V+YHELVMTTKEYMREVT IDPKWLVELAPRFFKVADPTKMSKRKRQER+EPLYDRYHEP
Sbjct: 1093 VIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEP 1152
Query: 3111 NSWRLSKRRA 3140
NSWRLSKRRA
Sbjct: 1153 NSWRLSKRRA 1162
>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 1203
Score = 1348 bits (3490), Expect = 0.0
Identities = 680/791 (85%), Positives = 718/791 (90%)
Frame = +1
Query: 211 SQSRSNEPELLMVYAGKVSRVMETGCFVQLNDFRGKEGLVHVSQLASRRIPNAKDVVKRG 390
S+ S E EL VY G++SRVMETGCFVQL+DFRGKEGLVHVSQ+A+RRI NAKDVVKR
Sbjct: 241 SRHGSGELELYAVYKGRISRVMETGCFVQLDDFRGKEGLVHVSQMATRRITNAKDVVKRD 300
Query: 391 QDVFVKVISMTGQKMSLSMRDVDQTTGKDLIPMKKRPDDDASRVNPQSSNQGPTSRTGLS 570
Q+V+VKVIS++GQK+SLSMRDVDQ TGKDL+P+KK +DDA R+NPQ S GP +RTGLS
Sbjct: 301 QEVYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDAMRMNPQDSKGGPAARTGLS 360
Query: 571 GIRITEDDGPSSSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXX 750
GIRI E+D SSRRPLKRMSSPE+WEAKQL+A+GV+ + E+P YD++ DG
Sbjct: 361 GIRIVEEDDAGSSRRPLKRMSSPERWEAKQLIASGVLSVSEYPTYDDEGDGLLYQEEGAE 420
Query: 751 XXXXXXXXXXXPAFLQGQSRYSIDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXXXXXX 930
PAFLQGQSRYS+DMSPVKIFKNPEG IK
Sbjct: 421 EELEIELNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQ 480
Query: 931 XTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRTK 1110
TMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDAYGK +TFGQR+K
Sbjct: 481 RTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSK 540
Query: 1111 LSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGC 1290
LSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGC
Sbjct: 541 LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGC 600
Query: 1291 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREILIDEN 1470
TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREIL+DEN
Sbjct: 601 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDEN 660
Query: 1471 LSQYSVIMLDEAHERTIHTDVLFGLLKQLVQRRPELRLIVTSATLDAEKFSGYFFNCNIF 1650
LSQYSVIMLDEAHERTIHTDVLFGLLKQLV+RRPELRLIVTSATLDAEKFSGYFFNCNIF
Sbjct: 661 LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIF 720
Query: 1651 TIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYE 1830
TIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEID ACQSLYE
Sbjct: 721 TIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYE 780
Query: 1831 RMKGLGKSVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVI 2010
RMKGLGK+VPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVI
Sbjct: 781 RMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVI 840
Query: 2011 DPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT 2190
DPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT
Sbjct: 841 DPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT 900
Query: 2191 SVPEIQRINLGATTLQMKAMGINDLLSFDFMDPPSPQALITAMEQLYSLGALDDEGLLTK 2370
++PEIQRINLG TTL MKAMGINDLLSFDFMDPPSPQALI+AMEQLYSLGALD+EGLLTK
Sbjct: 901 TIPEIQRINLGMTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK 960
Query: 2371 LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAMADQKRAKF 2550
LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQA ADQKRAKF
Sbjct: 961 LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKF 1020
Query: 2551 FQPEGDHLTLL 2583
FQPEGDHLTLL
Sbjct: 1021 FQPEGDHLTLL 1031
Score = 283 bits (724), Expect = 2e-73
Identities = 132/144 (91%), Positives = 142/144 (98%)
Frame = +3
Query: 2709 AQDVRKQLLTIMDRYKLDVLTAGKNFTKIRQAIAAGFFFHAARKDPQEGYKTLVENQPVY 2888
AQDVRKQLLTIMD+YKLDV++AGKNFTK+R+AI AGFFFHA+RKDPQEGY+TLVENQPVY
Sbjct: 1060 AQDVRKQLLTIMDKYKLDVVSAGKNFTKVRKAITAGFFFHASRKDPQEGYRTLVENQPVY 1119
Query: 2889 IHPSSALFQRQPDWVLYHELVMTTKEYMREVTAIDPKWLVELAPRFFKVADPTKMSKRKR 3068
IHPSSALFQRQPDWV+YHELVMTTKEYMREVT IDPKWLVELAPR+FKVADPTKMSKRKR
Sbjct: 1120 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKR 1179
Query: 3069 QERVEPLYDRYHEPNSWRLSKRRA 3140
QER+EPLYDRYHEPNSWRLSKRRA
Sbjct: 1180 QERIEPLYDRYHEPNSWRLSKRRA 1203
>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1177
Score = 1346 bits (3484), Expect = 0.0
Identities = 680/789 (86%), Positives = 719/789 (91%), Gaps = 2/789 (0%)
Frame = +1
Query: 223 SNEPELLMVYAGKVSRVMETGCFVQLNDFRGKEGLVHVSQLASRRIPNAKDVVKRGQDVF 402
S++PEL VY G+VSRVM++GCFVQLNDFRGKEGLVHVSQ+A+RRI NAKDVVKR QDVF
Sbjct: 217 SSDPELYRVYKGRVSRVMDSGCFVQLNDFRGKEGLVHVSQMATRRIANAKDVVKRDQDVF 276
Query: 403 VKVISMTGQKMSLSMRDVDQTTGKDLIPMKKRP--DDDASRVNPQSSNQGPTSRTGLSGI 576
VKVIS++GQK+SLSMRDVDQ +GKDL+P+KK DDD+ R NP S +GP +RTGLSGI
Sbjct: 277 VKVISVSGQKLSLSMRDVDQNSGKDLLPLKKSSGDDDDSLRTNPSGSKEGPVTRTGLSGI 336
Query: 577 RITEDDGPSSSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXX 756
RI E+D SRRPLKRMSSPE+WEAKQL+A+GV+ ++E+PMYD++ DG
Sbjct: 337 RILEEDDAVPSRRPLKRMSSPERWEAKQLIASGVLGVQEYPMYDDEGDGLLYQEGGAEEE 396
Query: 757 XXXXXXXXXPAFLQGQSRYSIDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXXXXXXXT 936
PAFLQGQ+RYS+DMSPVKIFKNPEG IK T
Sbjct: 397 LEIELNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRT 456
Query: 937 MLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRTKLS 1116
MLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GKALTFGQR+KLS
Sbjct: 457 MLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLS 516
Query: 1117 IQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ 1296
IQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ
Sbjct: 517 IQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ 576
Query: 1297 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTDGMLLREILIDENLS 1476
PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTDGMLLREILIDENLS
Sbjct: 577 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 636
Query: 1477 QYSVIMLDEAHERTIHTDVLFGLLKQLVQRRPELRLIVTSATLDAEKFSGYFFNCNIFTI 1656
QYSVIMLDEAHERTIHTDVLFGLLKQLV+RRP+LRLIVTSATLDAEKFSGYFFNCNIFTI
Sbjct: 637 QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTI 696
Query: 1657 PGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERM 1836
PGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGD+LLFLTGQEEID ACQSLYERM
Sbjct: 697 PGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERM 756
Query: 1837 KGLGKSVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDP 2016
KGLGK+VPELIILPVYSALPSEMQSRIF+PAPPGKRKVVVATNIAEASLTIDGIFYVIDP
Sbjct: 757 KGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDP 816
Query: 2017 GFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSV 2196
GFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTS+
Sbjct: 817 GFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSI 876
Query: 2197 PEIQRINLGATTLQMKAMGINDLLSFDFMDPPSPQALITAMEQLYSLGALDDEGLLTKLG 2376
PEIQRINLG TTL MKAMGINDLLSFDFMDPPSPQALI+AMEQLYSLGALD+EGLLTKLG
Sbjct: 877 PEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLG 936
Query: 2377 RKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAMADQKRAKFFQ 2556
RKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQA ADQKRAKFFQ
Sbjct: 937 RKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQ 996
Query: 2557 PEGDHLTLL 2583
PEGDHLTLL
Sbjct: 997 PEGDHLTLL 1005
Score = 284 bits (727), Expect = 1e-73
Identities = 134/144 (93%), Positives = 142/144 (98%)
Frame = +3
Query: 2709 AQDVRKQLLTIMDRYKLDVLTAGKNFTKIRQAIAAGFFFHAARKDPQEGYKTLVENQPVY 2888
AQDVRKQLL+IMD+YKLDV++AGKNFTKIR+AI AGFFFHAARKDPQEGY+TLVENQPVY
Sbjct: 1034 AQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1093
Query: 2889 IHPSSALFQRQPDWVLYHELVMTTKEYMREVTAIDPKWLVELAPRFFKVADPTKMSKRKR 3068
IHPSSALFQRQPDWV+YHELVMTTKEYMREVT IDPKWLVELAPRFFKVADPTKMSKRKR
Sbjct: 1094 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKR 1153
Query: 3069 QERVEPLYDRYHEPNSWRLSKRRA 3140
QER+EPLYDRYHEPNSWRLSKRRA
Sbjct: 1154 QERIEPLYDRYHEPNSWRLSKRRA 1177