BLASTX nr result

ID: Coptis24_contig00006241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006241
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321284.1| predicted protein [Populus trichocarpa] gi|1...   136   4e-30
ref|XP_002521079.1| conserved hypothetical protein [Ricinus comm...   135   1e-29
ref|XP_002529470.1| conserved hypothetical protein [Ricinus comm...   134   2e-29
emb|CBI40813.3| unnamed protein product [Vitis vinifera]              134   3e-29
ref|XP_002262911.1| PREDICTED: small ubiquitin-related modifier ...   134   3e-29

>ref|XP_002321284.1| predicted protein [Populus trichocarpa] gi|118487404|gb|ABK95530.1|
           unknown [Populus trichocarpa]
           gi|222862057|gb|EEE99599.1| predicted protein [Populus
           trichocarpa]
          Length = 108

 Score =  136 bits (343), Expect = 4e-30
 Identities = 66/68 (97%), Positives = 67/68 (98%)
 Frame = -2

Query: 783 HINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL 604
           HINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL
Sbjct: 26  HINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL 85

Query: 603 EMEDGDXI 580
           +MEDGD I
Sbjct: 86  DMEDGDEI 93


>ref|XP_002521079.1| conserved hypothetical protein [Ricinus communis]
           gi|223539648|gb|EEF41230.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 108

 Score =  135 bits (339), Expect = 1e-29
 Identities = 65/68 (95%), Positives = 67/68 (98%)
 Frame = -2

Query: 783 HINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL 604
           HINLKVKGQDGNE+FFRIKRSTQLRKL+TAYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL
Sbjct: 27  HINLKVKGQDGNEMFFRIKRSTQLRKLITAYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL 86

Query: 603 EMEDGDXI 580
           EMEDGD I
Sbjct: 87  EMEDGDEI 94


>ref|XP_002529470.1| conserved hypothetical protein [Ricinus communis]
           gi|223531086|gb|EEF32936.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score =  134 bits (338), Expect = 2e-29
 Identities = 65/68 (95%), Positives = 66/68 (97%)
 Frame = -2

Query: 783 HINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL 604
           HINLKVKGQDGNEVFFRIKRSTQL+KLM AYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL
Sbjct: 20  HINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL 79

Query: 603 EMEDGDXI 580
           EMEDGD I
Sbjct: 80  EMEDGDEI 87


>emb|CBI40813.3| unnamed protein product [Vitis vinifera]
          Length = 91

 Score =  134 bits (336), Expect = 3e-29
 Identities = 65/68 (95%), Positives = 66/68 (97%)
 Frame = -2

Query: 783 HINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL 604
           HINLKVKGQDGNEVFFRIKRSTQLRKLM+AYCDRQSVE NSIAFLFDGRRLRGEQTPDEL
Sbjct: 6   HINLKVKGQDGNEVFFRIKRSTQLRKLMSAYCDRQSVELNSIAFLFDGRRLRGEQTPDEL 65

Query: 603 EMEDGDXI 580
           EMEDGD I
Sbjct: 66  EMEDGDEI 73


>ref|XP_002262911.1| PREDICTED: small ubiquitin-related modifier 2 [Vitis vinifera]
           gi|296090483|emb|CBI40814.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score =  134 bits (336), Expect = 3e-29
 Identities = 65/68 (95%), Positives = 66/68 (97%)
 Frame = -2

Query: 783 HINLKVKGQDGNEVFFRIKRSTQLRKLMTAYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL 604
           HINLKVKGQDGNEVFFRIKRSTQLRKLM+AYCDRQSVE NSIAFLFDGRRLRGEQTPDEL
Sbjct: 23  HINLKVKGQDGNEVFFRIKRSTQLRKLMSAYCDRQSVELNSIAFLFDGRRLRGEQTPDEL 82

Query: 603 EMEDGDXI 580
           EMEDGD I
Sbjct: 83  EMEDGDEI 90


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