BLASTX nr result
ID: Coptis24_contig00006230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00006230
(1933 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas... 509 0.0
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2... 508 0.0
ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu... 503 0.0
ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arab... 495 0.0
ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thalia... 492 0.0
>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
gi|296090151|emb|CBI39970.3| unnamed protein product
[Vitis vinifera]
Length = 907
Score = 509 bits (1312), Expect(2) = 0.0
Identities = 258/329 (78%), Positives = 280/329 (85%), Gaps = 4/329 (1%)
Frame = +2
Query: 551 QSYVGKLPQYPHPVASSISSRMMVELGMLTXXXXXXXXXXXXXXXXXXXXXTSFAYFGVI 730
+S+VGKLP++PHPVASSISSRMMVELGM+T TSF + +
Sbjct: 224 KSWVGKLPEFPHPVASSISSRMMVELGMVTAVMAAAAVVVGGFLASAVFAVTSFIFATAV 283
Query: 731 YVMWPLAKPILKLVLDLCFGILEGIWDKIYD----GGISSKLYEFYTFGGVSSSLEMLKP 898
YV+WPL KP L+L + GILE +WD + D GG+ SKL E YTFGG+S+SLEMLKP
Sbjct: 284 YVVWPLVKPFLRLFTGIISGILERVWDNVIDVFSDGGVFSKLNEIYTFGGISASLEMLKP 343
Query: 899 IMLVFVTMVLLIRFTLSRRPKNFRKWDIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEA 1078
IMLVF+TM LL+RFTLSRRPKNFRKWDIWQGIEF QSK QARVDGSTGV F DVAGI+EA
Sbjct: 344 IMLVFLTMALLVRFTLSRRPKNFRKWDIWQGIEFSQSKAQARVDGSTGVKFSDVAGIEEA 403
Query: 1079 VDELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSE 1258
V+ELQELV+YLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSE
Sbjct: 404 VEELQELVKYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSE 463
Query: 1259 FVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGLSSESTNDLYNAATQERE 1438
FVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQG+ SEST+ LYNAATQERE
Sbjct: 464 FVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFSESTDHLYNAATQERE 523
Query: 1439 TTLNQLLIELDGFDTGKGVIFLGATNRMD 1525
TTLNQLLIELDGFDTGKGVIFLGATNRMD
Sbjct: 524 TTLNQLLIELDGFDTGKGVIFLGATNRMD 552
Score = 187 bits (474), Expect(2) = 0.0
Identities = 98/136 (72%), Positives = 110/136 (80%)
Frame = +1
Query: 1525 LLDPALLNRHGRFDRKIRIHPPDAKGRLAILKVHARKVNMSPTVDLSSYAQNLPGWTGTK 1704
LLDPALL R GRFDRKIRI PP+AKGRL ILKVHARKV ++ +VDLS+YAQNLPGWTG +
Sbjct: 553 LLDPALL-RPGRFDRKIRIRPPNAKGRLDILKVHARKVKLAESVDLSTYAQNLPGWTGAR 611
Query: 1705 XXXXXXXXXXXXXRSRRGHGSILQSDVDDVVDCLTVGPKRVGIELGHQGQCRRATTEVGT 1884
R +GH +ILQSDVD+ VD LTVGPKRVGIELGHQGQCRRATTEVGT
Sbjct: 612 LAQLLQEAALVAVR--KGHEAILQSDVDEAVDRLTVGPKRVGIELGHQGQCRRATTEVGT 669
Query: 1885 AMTSYLLKRYEDAKVE 1932
A+TS+LL+RYE AKVE
Sbjct: 670 AITSHLLRRYESAKVE 685
>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
predicted protein [Populus trichocarpa]
Length = 932
Score = 508 bits (1308), Expect(2) = 0.0
Identities = 257/330 (77%), Positives = 278/330 (84%), Gaps = 4/330 (1%)
Frame = +2
Query: 548 LQSYVGKLPQYPHPVASSISSRMMVELGMLTXXXXXXXXXXXXXXXXXXXXXTSFAYFGV 727
+ S VGKLP+YPHPVASSISSRMMVELGM+T TSF +
Sbjct: 247 MASSVGKLPEYPHPVASSISSRMMVELGMVTAVMAAAAVVVGGFLASAVFAVTSFIFVAT 306
Query: 728 IYVMWPLAKPILKLVLDLCFGILEGIWDKIYD----GGISSKLYEFYTFGGVSSSLEMLK 895
+YV WP+AKP +KL L L F ILEG+WD + D GG+ SK YEFYTFGGVS+S+EMLK
Sbjct: 307 VYVAWPIAKPFVKLFLGLTFSILEGVWDYVVDIFSDGGLFSKFYEFYTFGGVSASIEMLK 366
Query: 896 PIMLVFVTMVLLIRFTLSRRPKNFRKWDIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDE 1075
PIMLV +TMVLL+RFTLSRRPKNFRKWD+WQGI+F +SK +ARVDGSTGV F DVAGIDE
Sbjct: 367 PIMLVLLTMVLLVRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDE 426
Query: 1076 AVDELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS 1255
AV+ELQELVRYLKNPELFDKMGIKPPHGVLLEG PGCGKTLVAKAIAGEAGVPFYQMAGS
Sbjct: 427 AVEELQELVRYLKNPELFDKMGIKPPHGVLLEGAPGCGKTLVAKAIAGEAGVPFYQMAGS 486
Query: 1256 EFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGLSSESTNDLYNAATQER 1435
EFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQG+ EST+ LYNAATQER
Sbjct: 487 EFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKESTDHLYNAATQER 546
Query: 1436 ETTLNQLLIELDGFDTGKGVIFLGATNRMD 1525
ETTLNQLLIELDGFDTGKGVIFL ATNR D
Sbjct: 547 ETTLNQLLIELDGFDTGKGVIFLAATNRRD 576
Score = 183 bits (464), Expect(2) = 0.0
Identities = 95/136 (69%), Positives = 107/136 (78%)
Frame = +1
Query: 1525 LLDPALLNRHGRFDRKIRIHPPDAKGRLAILKVHARKVNMSPTVDLSSYAQNLPGWTGTK 1704
LLDPALL R GRFDRKIRI PP+AKGRL ILK+HA KV MS +VDLS+Y +NLPGWTG K
Sbjct: 577 LLDPALL-RPGRFDRKIRIRPPNAKGRLEILKIHASKVKMSDSVDLSTYGKNLPGWTGAK 635
Query: 1705 XXXXXXXXXXXXXRSRRGHGSILQSDVDDVVDCLTVGPKRVGIELGHQGQCRRATTEVGT 1884
R +GH +ILQSD+DD VD LTVGPKRVGIELGHQGQCRRATTE+G
Sbjct: 636 LAQLVQEAALVAVR--QGHAAILQSDMDDAVDRLTVGPKRVGIELGHQGQCRRATTELGV 693
Query: 1885 AMTSYLLKRYEDAKVE 1932
MTS+LL+RYE+AKVE
Sbjct: 694 VMTSHLLRRYENAKVE 709
>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
putative [Ricinus communis]
Length = 925
Score = 503 bits (1296), Expect(2) = 0.0
Identities = 253/326 (77%), Positives = 279/326 (85%)
Frame = +2
Query: 548 LQSYVGKLPQYPHPVASSISSRMMVELGMLTXXXXXXXXXXXXXXXXXXXXXTSFAYFGV 727
++S VGKLP+YPHPVASSISSRM+VELGM+T TSF +
Sbjct: 247 MKSSVGKLPEYPHPVASSISSRMIVELGMVTAVMATAAVAVGGFLASAVFVVTSFIFVTT 306
Query: 728 IYVMWPLAKPILKLVLDLCFGILEGIWDKIYDGGISSKLYEFYTFGGVSSSLEMLKPIML 907
+YV+WP+A+P +KL L + GILEGI+D DGG+ SKL EFYTFGGVS+S+EMLKPI L
Sbjct: 307 VYVIWPIARPFVKLFLGIISGILEGIFDVFSDGGVFSKLSEFYTFGGVSASIEMLKPITL 366
Query: 908 VFVTMVLLIRFTLSRRPKNFRKWDIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEAVDE 1087
V +TMVLL+RFTLSRRPKNFRKWD+WQGI+F +SK +ARVDGSTGV F DVAGID+AV+E
Sbjct: 367 VLLTMVLLVRFTLSRRPKNFRKWDLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDDAVEE 426
Query: 1088 LQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE 1267
LQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE
Sbjct: 427 LQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVE 486
Query: 1268 VLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGLSSESTNDLYNAATQERETTL 1447
VLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQG+ EST+ LYNAATQERETTL
Sbjct: 487 VLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKESTDHLYNAATQERETTL 546
Query: 1448 NQLLIELDGFDTGKGVIFLGATNRMD 1525
NQLLIELDGFDTGKGVIFL ATNR D
Sbjct: 547 NQLLIELDGFDTGKGVIFLAATNRRD 572
Score = 180 bits (456), Expect(2) = 0.0
Identities = 95/136 (69%), Positives = 106/136 (77%)
Frame = +1
Query: 1525 LLDPALLNRHGRFDRKIRIHPPDAKGRLAILKVHARKVNMSPTVDLSSYAQNLPGWTGTK 1704
LLDPALL R GRFDRKIRI P+AKGRL ILK+HA KV MS +VDLS+ A+NLPGWTG K
Sbjct: 573 LLDPALL-RPGRFDRKIRIRAPNAKGRLEILKIHASKVKMSESVDLSTCAKNLPGWTGAK 631
Query: 1705 XXXXXXXXXXXXXRSRRGHGSILQSDVDDVVDCLTVGPKRVGIELGHQGQCRRATTEVGT 1884
R +GH SI+QSD+DD VD LTVGPKRVGI+LGHQGQCRRATTEVG
Sbjct: 632 LAQLVQEAALVAVR--QGHASIIQSDIDDAVDRLTVGPKRVGIDLGHQGQCRRATTEVGV 689
Query: 1885 AMTSYLLKRYEDAKVE 1932
AMTS+LL+ YEDAKVE
Sbjct: 690 AMTSHLLRLYEDAKVE 705
>ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arabidopsis lyrata subsp.
lyrata] gi|297315589|gb|EFH46012.1| hypothetical protein
ARALYDRAFT_492469 [Arabidopsis lyrata subsp. lyrata]
Length = 933
Score = 495 bits (1274), Expect(2) = 0.0
Identities = 250/330 (75%), Positives = 279/330 (84%), Gaps = 4/330 (1%)
Frame = +2
Query: 548 LQSYVGKLPQYPHPVASSISSRMMVELGMLTXXXXXXXXXXXXXXXXXXXXXTSFAYFGV 727
+ S+VGK+ +P+PVASSISSR+MVELGM+T TSFA+
Sbjct: 245 MTSWVGKVTDFPNPVASSISSRVMVELGMVTAVIAAAAVVVGGFLASAVFAVTSFAFVTT 304
Query: 728 IYVMWPLAKPILKLVLDLCFGILEGIWDKIYD----GGISSKLYEFYTFGGVSSSLEMLK 895
+YV+WP+AKP LKL + + FG+LE WD + D GGI S++ +FYTFGGVSSSLEMLK
Sbjct: 305 VYVVWPIAKPFLKLFVGIFFGVLEKSWDYLVDFLGDGGIFSRISDFYTFGGVSSSLEMLK 364
Query: 896 PIMLVFVTMVLLIRFTLSRRPKNFRKWDIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDE 1075
PI+LV +TMVLL+RFTLSRRPKNFRKWD+WQGI F QSK +ARVDGSTGV F DVAGIDE
Sbjct: 365 PILLVVMTMVLLVRFTLSRRPKNFRKWDLWQGIAFSQSKAEARVDGSTGVKFADVAGIDE 424
Query: 1076 AVDELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS 1255
AVDELQELV+YLKNP+LFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS
Sbjct: 425 AVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS 484
Query: 1256 EFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGLSSESTNDLYNAATQER 1435
EFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQG+ E+++ LYNAATQER
Sbjct: 485 EFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQER 544
Query: 1436 ETTLNQLLIELDGFDTGKGVIFLGATNRMD 1525
ETTLNQLLIELDGFDTGKGVIFLGATNR D
Sbjct: 545 ETTLNQLLIELDGFDTGKGVIFLGATNRRD 574
Score = 177 bits (449), Expect(2) = 0.0
Identities = 92/136 (67%), Positives = 105/136 (77%)
Frame = +1
Query: 1525 LLDPALLNRHGRFDRKIRIHPPDAKGRLAILKVHARKVNMSPTVDLSSYAQNLPGWTGTK 1704
LLDPALL R GRFDRKIR+ PP+AKGRL ILK+HA KV MS +VDLSSYA NLPGW+G K
Sbjct: 575 LLDPALL-RPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAK 633
Query: 1705 XXXXXXXXXXXXXRSRRGHGSILQSDVDDVVDCLTVGPKRVGIELGHQGQCRRATTEVGT 1884
R + H SILQSD+DD VD LTVGP R+G+ELGHQGQCRRATTEVG
Sbjct: 634 LAQLVQEAALVAVR--KTHSSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGV 691
Query: 1885 AMTSYLLKRYEDAKVE 1932
A+TS+LL RYE+AK+E
Sbjct: 692 AITSHLLLRYENAKIE 707
>ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana]
gi|2262118|gb|AAB63626.1| cell division protein isolog
[Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell
division protein-like [Arabidopsis thaliana]
gi|7269243|emb|CAB81312.1| cell division protein-like
[Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH
extracellular protease [Arabidopsis thaliana]
Length = 946
Score = 492 bits (1266), Expect(2) = 0.0
Identities = 249/330 (75%), Positives = 278/330 (84%), Gaps = 4/330 (1%)
Frame = +2
Query: 548 LQSYVGKLPQYPHPVASSISSRMMVELGMLTXXXXXXXXXXXXXXXXXXXXXTSFAYFGV 727
+ S+VGK+ +P+PVASSISSR+MVELGM+T TSFA+
Sbjct: 258 MTSWVGKVADFPNPVASSISSRVMVELGMVTAVIAAAAVVVGGFLASAVFAVTSFAFVTT 317
Query: 728 IYVMWPLAKPILKLVLDLCFGILEGIWDKIYD----GGISSKLYEFYTFGGVSSSLEMLK 895
+YV+WP+AKP LKL + + G+LE WD I D GGI S++ +FYTFGGV+SSLEMLK
Sbjct: 318 VYVVWPIAKPFLKLFVGVFLGVLEKSWDYIVDVLADGGIFSRISDFYTFGGVASSLEMLK 377
Query: 896 PIMLVFVTMVLLIRFTLSRRPKNFRKWDIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDE 1075
PI+LV +TMVLL+RFTLSRRPKNFRKWD+WQGI F QSK +ARVDGSTGV F DVAGIDE
Sbjct: 378 PILLVVMTMVLLVRFTLSRRPKNFRKWDLWQGIAFSQSKAEARVDGSTGVKFADVAGIDE 437
Query: 1076 AVDELQELVRYLKNPELFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS 1255
AVDELQELV+YLKNP+LFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS
Sbjct: 438 AVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGS 497
Query: 1256 EFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGLSSESTNDLYNAATQER 1435
EFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQG+ E+++ LYNAATQER
Sbjct: 498 EFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQER 557
Query: 1436 ETTLNQLLIELDGFDTGKGVIFLGATNRMD 1525
ETTLNQLLIELDGFDTGKGVIFLGATNR D
Sbjct: 558 ETTLNQLLIELDGFDTGKGVIFLGATNRRD 587
Score = 177 bits (449), Expect(2) = 0.0
Identities = 92/136 (67%), Positives = 105/136 (77%)
Frame = +1
Query: 1525 LLDPALLNRHGRFDRKIRIHPPDAKGRLAILKVHARKVNMSPTVDLSSYAQNLPGWTGTK 1704
LLDPALL R GRFDRKIR+ PP+AKGRL ILK+HA KV MS +VDLSSYA NLPGW+G K
Sbjct: 588 LLDPALL-RPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAK 646
Query: 1705 XXXXXXXXXXXXXRSRRGHGSILQSDVDDVVDCLTVGPKRVGIELGHQGQCRRATTEVGT 1884
R + H SILQSD+DD VD LTVGP R+G+ELGHQGQCRRATTEVG
Sbjct: 647 LAQLVQEAALVAVR--KTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGV 704
Query: 1885 AMTSYLLKRYEDAKVE 1932
A+TS+LL RYE+AK+E
Sbjct: 705 AITSHLLLRYENAKIE 720