BLASTX nr result

ID: Coptis24_contig00006229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006229
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arab...    96   4e-18
ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thalia...    95   7e-18
ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloproteas...    89   3e-16
ref|XP_004149014.1| PREDICTED: uncharacterized protein LOC101214...    89   3e-16
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16

>ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arabidopsis lyrata subsp.
           lyrata] gi|297315589|gb|EFH46012.1| hypothetical protein
           ARALYDRAFT_492469 [Arabidopsis lyrata subsp. lyrata]
          Length = 933

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/71 (66%), Positives = 58/71 (81%)
 Frame = +3

Query: 3   NDKVKLLTSKGISSGMSNEYEYKDFVVDLKEIPGDKNLQRTKWAMRLDENEAKAILESYT 182
           NDKVKLLTSK +S G+     Y+DF+VDLKEIPG K+LQRTKW+M+L+  EA+A+L+ YT
Sbjct: 177 NDKVKLLTSKEVS-GVPYTSGYRDFIVDLKEIPGVKSLQRTKWSMKLEVGEAQALLKEYT 235

Query: 183 GQQYEIETHMT 215
           G QYEIE HMT
Sbjct: 236 GPQYEIERHMT 246


>ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana]
           gi|2262118|gb|AAB63626.1| cell division protein isolog
           [Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell
           division protein-like [Arabidopsis thaliana]
           gi|7269243|emb|CAB81312.1| cell division protein-like
           [Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH
           extracellular protease [Arabidopsis thaliana]
          Length = 946

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/71 (66%), Positives = 58/71 (81%)
 Frame = +3

Query: 3   NDKVKLLTSKGISSGMSNEYEYKDFVVDLKEIPGDKNLQRTKWAMRLDENEAKAILESYT 182
           NDKVKLLTSK +S G+S    Y+ F+VDLKEIPG K+LQRTKW+M+L+  EA+A+L+ YT
Sbjct: 190 NDKVKLLTSKEVS-GVSYTSGYRGFIVDLKEIPGVKSLQRTKWSMKLEVGEAQALLKEYT 248

Query: 183 GQQYEIETHMT 215
           G QYEIE HMT
Sbjct: 249 GPQYEIERHMT 259


>ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis
           sativus]
          Length = 962

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/69 (60%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   NDKVKLLTSKGISSGMSNEYEYKDFVVDLKEIPGDKNLQRTKWAMRLDENEAKAILESYT 182
           NDKVKLLTSK   +       ++DF+VDLKEIPG+K+LQRT+WA+RLDE E + +LE YT
Sbjct: 201 NDKVKLLTSKESRATFYGSM-FRDFIVDLKEIPGEKSLQRTRWALRLDETEIQTVLEQYT 259

Query: 183 GQQYEIETH 209
           G QY+IE+H
Sbjct: 260 GPQYQIESH 268


>ref|XP_004149014.1| PREDICTED: uncharacterized protein LOC101214425 [Cucumis sativus]
          Length = 547

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/69 (60%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   NDKVKLLTSKGISSGMSNEYEYKDFVVDLKEIPGDKNLQRTKWAMRLDENEAKAILESYT 182
           NDKVKLLTSK   +       ++DF+VDLKEIPG+K+LQRT+WA+RLDE E + +LE YT
Sbjct: 74  NDKVKLLTSKESRATFYGSM-FRDFIVDLKEIPGEKSLQRTRWALRLDETEIQTVLEQYT 132

Query: 183 GQQYEIETH 209
           G QY+IE+H
Sbjct: 133 GPQYQIESH 141


>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
           predicted protein [Populus trichocarpa]
          Length = 932

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/70 (61%), Positives = 55/70 (78%)
 Frame = +3

Query: 3   NDKVKLLTSKGISSGMSNEYEYKDFVVDLKEIPGDKNLQRTKWAMRLDENEAKAILESYT 182
           ++KVKLLTSK  + G +   +Y+ F+VDLKEIPG+K+L RTKW MRL+ENEA+ +LE YT
Sbjct: 179 SEKVKLLTSKEAAMG-TYANDYRGFIVDLKEIPGEKSLHRTKWTMRLNENEAQTLLEEYT 237

Query: 183 GQQYEIETHM 212
           G  YEIE HM
Sbjct: 238 GPFYEIERHM 247


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