BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006218
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274311.1| PREDICTED: 50S ribosomal protein L9, chlorop...   244   1e-62
ref|XP_004147275.1| PREDICTED: 50S ribosomal protein L9, chlorop...   238   1e-60
ref|XP_003606325.1| 50S ribosomal protein L9 [Medicago truncatul...   225   9e-57
ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|1...   225   1e-56
emb|CBI17129.3| unnamed protein product [Vitis vinifera]              222   7e-56

>ref|XP_002274311.1| PREDICTED: 50S ribosomal protein L9, chloroplastic [Vitis vinifera]
          Length = 195

 Score =  244 bits (624), Expect = 1e-62
 Identities = 128/195 (65%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
 Frame = +2

Query: 11  MASTTT-LAWNSSSLFSNTTPNINTPSKISHNQNALFIFAQKKAQKTRKIILKEDVAQVG 187
           MAST   L+W+SS+    +  N N P K S N+    + AQKKA+K RKIILKEDVA++G
Sbjct: 1   MASTAAALSWSSSTWLQTSVNNFNQPRKFSDNRMVFVVVAQKKAKKLRKIILKEDVAELG 60

Query: 188 KKGDLKDVKAGFYRNYLHPLGMAQIVTPTLLXXXXXXXXXXXXXXXXXXXXXQQLAQIFE 367
           KKG L DVKAG+YRNYL P+GMAQIVTP LL                     QQ+A +FE
Sbjct: 61  KKGQLLDVKAGYYRNYLQPMGMAQIVTPLLLKEMRMEEERIEAEKKRVKEEAQQMALMFE 120

Query: 368 TVGAFKVKRKGGKNKQIFGSVTPQDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAELKL 547
           TVGAFKVKRKGGK KQIFGSVT QDL DIIKAQ+QRDVDKR VSLPEIRETGEY+AELKL
Sbjct: 121 TVGAFKVKRKGGKGKQIFGSVTAQDLTDIIKAQLQRDVDKRIVSLPEIRETGEYVAELKL 180

Query: 548 HPEVTARIRVNVYAN 592
           HPEVTAR+R+NVYAN
Sbjct: 181 HPEVTARVRLNVYAN 195


>ref|XP_004147275.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Cucumis
           sativus]
          Length = 198

 Score =  238 bits (608), Expect = 1e-60
 Identities = 128/198 (64%), Positives = 146/198 (73%), Gaps = 4/198 (2%)
 Frame = +2

Query: 11  MAS-TTTLAWNSSSL---FSNTTPNINTPSKISHNQNALFIFAQKKAQKTRKIILKEDVA 178
           MAS TT L+W+SS L     N   NI   +K S+ + A+ + AQKKA K+RKIILKEDVA
Sbjct: 1   MASITTALSWSSSLLDMGLPNVAGNIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVA 60

Query: 179 QVGKKGDLKDVKAGFYRNYLHPLGMAQIVTPTLLXXXXXXXXXXXXXXXXXXXXXQQLAQ 358
            +GKKG L DVKAG+YRNYL P+G AQIVTP LL                     QQLA 
Sbjct: 61  DLGKKGQLIDVKAGYYRNYLFPMGKAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLAL 120

Query: 359 IFETVGAFKVKRKGGKNKQIFGSVTPQDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAE 538
           IF+TVGAFKVKRKGGK KQIFG+VT QDLVDIIKAQ+QRD+DKR V LPEIRETGEY+AE
Sbjct: 121 IFQTVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAE 180

Query: 539 LKLHPEVTARIRVNVYAN 592
           LKLHPEVTAR+RVNV+AN
Sbjct: 181 LKLHPEVTARVRVNVFAN 198


>ref|XP_003606325.1| 50S ribosomal protein L9 [Medicago truncatula]
           gi|217069924|gb|ACJ83322.1| unknown [Medicago
           truncatula] gi|355507380|gb|AES88522.1| 50S ribosomal
           protein L9 [Medicago truncatula]
           gi|388495282|gb|AFK35707.1| unknown [Medicago
           truncatula]
          Length = 192

 Score =  225 bits (574), Expect = 9e-57
 Identities = 124/194 (63%), Positives = 141/194 (72%)
 Frame = +2

Query: 11  MASTTTLAWNSSSLFSNTTPNINTPSKISHNQNALFIFAQKKAQKTRKIILKEDVAQVGK 190
           MAS++TL+  S  L  + T N+NT S+ S+  +   IFAQKKA+KTRKIILKED+  VGK
Sbjct: 1   MASSSTLS--SLPLQHSFTSNLNTSSQFSNKTSRFLIFAQKKAKKTRKIILKEDILNVGK 58

Query: 191 KGDLKDVKAGFYRNYLHPLGMAQIVTPTLLXXXXXXXXXXXXXXXXXXXXXQQLAQIFET 370
           KG+L DVKAGF+RNYL P G AQI T  LL                      QLAQI E+
Sbjct: 59  KGELLDVKAGFFRNYLFPSGKAQIATADLLKELKIEEERIEAEKQRVKEEALQLAQILES 118

Query: 371 VGAFKVKRKGGKNKQIFGSVTPQDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAELKLH 550
           VGAFKVKRKGGK KQIFGSVT QDLVDIIKAQ+QR+VDKR V LPEIRETGEYIAELKLH
Sbjct: 119 VGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVELPEIRETGEYIAELKLH 178

Query: 551 PEVTARIRVNVYAN 592
           PEVTA++ VNV AN
Sbjct: 179 PEVTAKVSVNVLAN 192


>ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|118488503|gb|ABK96065.1|
           unknown [Populus trichocarpa]
           gi|222873559|gb|EEF10690.1| predicted protein [Populus
           trichocarpa]
          Length = 198

 Score =  225 bits (573), Expect = 1e-56
 Identities = 122/192 (63%), Positives = 137/192 (71%)
 Frame = +2

Query: 17  STTTLAWNSSSLFSNTTPNINTPSKISHNQNALFIFAQKKAQKTRKIILKEDVAQVGKKG 196
           + TTL+  SSS         N  SK    +  + + AQKKA+KTRKIILKEDV  +GKKG
Sbjct: 7   AATTLSCTSSSWLHGFVGPTNEISKFPDKRIPMLVLAQKKAKKTRKIILKEDVTDLGKKG 66

Query: 197 DLKDVKAGFYRNYLHPLGMAQIVTPTLLXXXXXXXXXXXXXXXXXXXXXQQLAQIFETVG 376
            L DVKAGFYRN+L P G AQIVTP L+                     QQLA IFETVG
Sbjct: 67  QLVDVKAGFYRNFLLPTGKAQIVTPGLVKEMRMEEERIEAEKKRVKEEAQQLALIFETVG 126

Query: 377 AFKVKRKGGKNKQIFGSVTPQDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAELKLHPE 556
           AFKVKRKGGK +QIFG+VT QDLVDIIKAQIQRDVDKR VSLP+IRETGEYIAELKLHPE
Sbjct: 127 AFKVKRKGGKGRQIFGTVTAQDLVDIIKAQIQRDVDKRIVSLPDIRETGEYIAELKLHPE 186

Query: 557 VTARIRVNVYAN 592
           VTA++R+NVYAN
Sbjct: 187 VTAQVRLNVYAN 198


>emb|CBI17129.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  222 bits (566), Expect = 7e-56
 Identities = 114/158 (72%), Positives = 126/158 (79%)
 Frame = +2

Query: 119 IFAQKKAQKTRKIILKEDVAQVGKKGDLKDVKAGFYRNYLHPLGMAQIVTPTLLXXXXXX 298
           + AQKKA+K RKIILKEDVA++GKKG L DVKAG+YRNYL P+GMAQIVTP LL      
Sbjct: 5   VVAQKKAKKLRKIILKEDVAELGKKGQLLDVKAGYYRNYLQPMGMAQIVTPLLLKEMRME 64

Query: 299 XXXXXXXXXXXXXXXQQLAQIFETVGAFKVKRKGGKNKQIFGSVTPQDLVDIIKAQIQRD 478
                          QQ+A +FETVGAFKVKRKGGK KQIFGSVT QDL DIIKAQ+QRD
Sbjct: 65  EERIEAEKKRVKEEAQQMALMFETVGAFKVKRKGGKGKQIFGSVTAQDLTDIIKAQLQRD 124

Query: 479 VDKRFVSLPEIRETGEYIAELKLHPEVTARIRVNVYAN 592
           VDKR VSLPEIRETGEY+AELKLHPEVTAR+R+NVYAN
Sbjct: 125 VDKRIVSLPEIRETGEYVAELKLHPEVTARVRLNVYAN 162