BLASTX nr result
ID: Coptis24_contig00006200
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00006200
(2361 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communi... 820 0.0
ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein lig... 830 0.0
ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein lig... 829 0.0
ref|XP_002313070.1| predicted protein [Populus trichocarpa] gi|2... 798 0.0
ref|XP_003537904.1| PREDICTED: probable E3 ubiquitin-protein lig... 785 0.0
>ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communis]
gi|223541768|gb|EEF43316.1| Protein ariadne-1, putative
[Ricinus communis]
Length = 592
Score = 820 bits (2119), Expect(2) = 0.0
Identities = 391/512 (76%), Positives = 433/512 (84%), Gaps = 3/512 (0%)
Frame = +2
Query: 227 SFDGIENDDDDWTKSS-KNPTCQVITRESLIAAQREDLRRVMELLGLSEQHARTLLIHHR 403
S DGIEN++ D+ + K PT ++IT+ESL+AAQREDLRRVMELL L E HARTLLIH+R
Sbjct: 20 SLDGIENEESDFHWAPPKGPTTKIITKESLLAAQREDLRRVMELLSLREHHARTLLIHYR 79
Query: 404 WDVQKLLADLVEKEKDRLFAEAGVTVLESRCHFTS-QSRSEETCYICMEDIPIEQVTTMD 580
WDV++L A VEK K LF EAGVT +E S S C IC+ED+P + T MD
Sbjct: 80 WDVERLFAVFVEKGKTFLFTEAGVTGVEQLDRDAPLTSSSIIMCDICIEDVPGNRATRMD 139
Query: 581 CGHCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAIVRNLVNARDPDLAERFERF 760
C HCFCN+CWTEHFIVKINEGQSRRI+CMAHKCNAICDEA+VRNLV+ R PDLAERF+RF
Sbjct: 140 CSHCFCNDCWTEHFIVKINEGQSRRIQCMAHKCNAICDEAVVRNLVSKRHPDLAERFDRF 199
Query: 761 LLESYIEDNTMVKWCPSVPHCGNAIRVEDEIYCEVECACGLQFCFGCSSEAHSPCSCLMW 940
LLESYIEDN MVKWCPS PHCGNAIRVE++ CEVEC+CGLQFCF C SEAHSPCSCLMW
Sbjct: 200 LLESYIEDNKMVKWCPSAPHCGNAIRVEEDECCEVECSCGLQFCFSCLSEAHSPCSCLMW 259
Query: 941 KLWAKKCKDESETVNWMTVNTKPCPKCYKPVEKNGGCNLVSCICGQPFCWVCGGATGRDH 1120
+LW+KKC+DESETVNW+TV+TKPCPKC+KPVEKNGGCNLVSCICGQ FCW+CGGATG+DH
Sbjct: 260 ELWSKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGKDH 319
Query: 1121 TWTSISGHSCGRYKEDTEKKAERAKRDLYRYMHYHNHYKAHTDSFKLEAKLKETIQGKIS 1300
TW+ ISGHSCGRYKED EKK ERAKRDLYRYMHYHN YKAHTDSFKLE KLKETI K+S
Sbjct: 320 TWSRISGHSCGRYKEDREKKTERAKRDLYRYMHYHNRYKAHTDSFKLETKLKETILEKVS 379
Query: 1301 ILEDNSTSDKDCSWVTNGLYRLFRSRRVLSYSYPFAYYMFGDDLFKDEMTKEETERKQHL 1480
I E+ + +D SWVTNGL RLFRSRRVLSYSYPFA+YMFGD+LF DEMT EE E KQ+L
Sbjct: 380 ISEEKESRLRDFSWVTNGLCRLFRSRRVLSYSYPFAFYMFGDELFNDEMTVEEREIKQNL 439
Query: 1481 FEDQQQQLESNVEKLSKFIEEPFDTYAMDKVMEIRMQVINLTVITDRLCTKMYECIENDL 1660
FEDQQQQLESNVEKLSKF+EEPF+ Y DKVMEIRMQVINL ITD LC KMYECIENDL
Sbjct: 440 FEDQQQQLESNVEKLSKFLEEPFEQYTDDKVMEIRMQVINLCAITDTLCKKMYECIENDL 499
Query: 1661 LGCLQFETHNIAPYKSKGVEKASEL-PVWSTK 1753
LG LQ THNIAPYKSKG+EKASEL WS K
Sbjct: 500 LGSLQLGTHNIAPYKSKGIEKASELSSCWSNK 531
Score = 50.1 bits (118), Expect(2) = 0.0
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = +3
Query: 1866 GGTVEHNDPSGTQNNE-RGCSSRKRTRREARGDGLFDLNLPA 1988
GG+ EH+ PSG+++++ GCSSRKR R+E G G FDLNLPA
Sbjct: 547 GGSSEHDRPSGSRSSDDSGCSSRKRARKE--GGGFFDLNLPA 586
>ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
sativus] gi|449471519|ref|XP_004153333.1| PREDICTED:
probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
sativus] gi|449502370|ref|XP_004161621.1| PREDICTED:
probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
sativus]
Length = 589
Score = 830 bits (2145), Expect(2) = 0.0
Identities = 384/510 (75%), Positives = 442/510 (86%), Gaps = 1/510 (0%)
Frame = +2
Query: 227 SFDGIENDDDDWTKSSKNPTCQVITRESLIAAQREDLRRVMELLGLSEQHARTLLIHHRW 406
S G+EN+D + + K P+ +VIT+ESL+AAQ+ED+RRVM+LL L E HARTLLIH+RW
Sbjct: 18 SLHGLENEDSEIQRVPKTPSTKVITKESLLAAQKEDMRRVMDLLSLREYHARTLLIHYRW 77
Query: 407 DVQKLLADLVEKEKDRLFAEAGVTVLESRCHFTSQSRSEETCYICMEDIPIEQVTTMDCG 586
DV+KL A LVEK K+ LFA AGVT++E+R + +S++ S C ICME++ T +DCG
Sbjct: 78 DVEKLFAVLVEKGKNHLFATAGVTMIENRSNTSSEASSMVMCDICMEEVHGNDATRVDCG 137
Query: 587 HCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAIVRNLVNARDPDLAERFERFLL 766
HCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEA+VR LV+ R PDLA +F+RFLL
Sbjct: 138 HCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAVVRTLVSKRHPDLANKFDRFLL 197
Query: 767 ESYIEDNTMVKWCPSVPHCGNAIRVEDEIYCEVECACGLQFCFGCSSEAHSPCSCLMWKL 946
ESYIEDN VKWCPS PHCGNAIRVED+ +CEVEC+CGLQFCF C SEAHSPCSCLMW+L
Sbjct: 198 ESYIEDNKRVKWCPSTPHCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWEL 257
Query: 947 WAKKCKDESETVNWMTVNTKPCPKCYKPVEKNGGCNLVSCICGQPFCWVCGGATGRDHTW 1126
W KKC+DESETVNW+TV+TKPCPKC+KPVEKNGGCNLVSCICGQ FCW+CGGATGR+HTW
Sbjct: 258 WIKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTW 317
Query: 1127 TSISGHSCGRYKEDTEKKAERAKRDLYRYMHYHNHYKAHTDSFKLEAKLKETIQGKISIL 1306
+SISGHSCGRYKE++E+KAERAKRDLYRYMHYHN YKAHTDSFKLE+KLKE+IQ KISI
Sbjct: 318 SSISGHSCGRYKEESEQKAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKESIQEKISIS 377
Query: 1307 EDNSTSDKDCSWVTNGLYRLFRSRRVLSYSYPFAYYMFGDDLFKDEMTKEETERKQHLFE 1486
E+ + +D SWV NGL RLFRSRRVLSYSYPFA+YMFGD+LFKDEMT+ E E KQHLFE
Sbjct: 378 EERESMLRDFSWVNNGLSRLFRSRRVLSYSYPFAFYMFGDELFKDEMTEAEREIKQHLFE 437
Query: 1487 DQQQQLESNVEKLSKFIEEPFDTYAMDKVMEIRMQVINLTVITDRLCTKMYECIENDLLG 1666
DQQQQLE+NVEKLSKF+EEPFD Y DKVMEIRMQVINL+VITD LC KMY+CIENDLLG
Sbjct: 438 DQQQQLEANVEKLSKFLEEPFDQYTKDKVMEIRMQVINLSVITDTLCKKMYDCIENDLLG 497
Query: 1667 CLQFETHNIAPYKSKGVEKASELPV-WSTK 1753
L+ HNIAPYKSKG+EKA EL W++K
Sbjct: 498 SLELGIHNIAPYKSKGIEKALELSACWNSK 527
Score = 40.0 bits (92), Expect(2) = 0.0
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = +3
Query: 1866 GGTVEHNDPSGTQNNERGCSSRKRTRREARGDGLFDLNLPA 1988
GG E + + E GCSSRKR R E FDLNLPA
Sbjct: 543 GGLSECERLTSLNSEENGCSSRKRARAEVVAGNFFDLNLPA 583
>ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1 isoform 1 [Vitis
vinifera] gi|297741410|emb|CBI32541.3| unnamed protein
product [Vitis vinifera]
Length = 589
Score = 829 bits (2141), Expect = 0.0
Identities = 389/504 (77%), Positives = 434/504 (86%), Gaps = 1/504 (0%)
Frame = +2
Query: 227 SFDGIENDDDDWT-KSSKNPTCQVITRESLIAAQREDLRRVMELLGLSEQHARTLLIHHR 403
SFDG+ N++ D+ K P+ QVIT+ESL+ AQR+DLRRVM+LL L E HARTLLIHHR
Sbjct: 18 SFDGLVNEESDFQWVPPKAPSSQVITKESLLTAQRDDLRRVMDLLSLREHHARTLLIHHR 77
Query: 404 WDVQKLLADLVEKEKDRLFAEAGVTVLESRCHFTSQSRSEETCYICMEDIPIEQVTTMDC 583
WDV+KL A +VEK K LFAEAGV ++E + S S C ICME + + T MDC
Sbjct: 78 WDVEKLFAVMVEKGKPCLFAEAGVPLMEHQIVPLPLSSSTLMCDICMEAVCSKDSTKMDC 137
Query: 584 GHCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAIVRNLVNARDPDLAERFERFL 763
GHCFCNNCWTEHF+V+INEGQSRRIRCMA+KCNAICDEAIVRNLV R PDLAE+F+RFL
Sbjct: 138 GHCFCNNCWTEHFVVRINEGQSRRIRCMAYKCNAICDEAIVRNLVGRRHPDLAEKFDRFL 197
Query: 764 LESYIEDNTMVKWCPSVPHCGNAIRVEDEIYCEVECACGLQFCFGCSSEAHSPCSCLMWK 943
LESYIEDN MVKWCPS PHCGNAIRVED+ +CEVEC+CGLQFCF C SEAHSPCSCLMW+
Sbjct: 198 LESYIEDNKMVKWCPSAPHCGNAIRVEDDEFCEVECSCGLQFCFSCLSEAHSPCSCLMWE 257
Query: 944 LWAKKCKDESETVNWMTVNTKPCPKCYKPVEKNGGCNLVSCICGQPFCWVCGGATGRDHT 1123
W KKC+DESETVNW+TV+TKPCPKC+KPVEKNGGCNLVSCICGQ FCW+CGGATGRDHT
Sbjct: 258 FWTKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGRDHT 317
Query: 1124 WTSISGHSCGRYKEDTEKKAERAKRDLYRYMHYHNHYKAHTDSFKLEAKLKETIQGKISI 1303
W+SISGHSCGRYKED EKKAERAKRDLYRYMHYHN YKAHTDSFKLE+KLK+TI+ K+S
Sbjct: 318 WSSISGHSCGRYKEDREKKAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKDTIKVKVSN 377
Query: 1304 LEDNSTSDKDCSWVTNGLYRLFRSRRVLSYSYPFAYYMFGDDLFKDEMTKEETERKQHLF 1483
E+ ++ +D SWVTNGLYRLFRSRRVLSYSYPFA+YMFGDDLF DEMTKEE E KQHLF
Sbjct: 378 SEEKESTLRDFSWVTNGLYRLFRSRRVLSYSYPFAFYMFGDDLFNDEMTKEEREIKQHLF 437
Query: 1484 EDQQQQLESNVEKLSKFIEEPFDTYAMDKVMEIRMQVINLTVITDRLCTKMYECIENDLL 1663
EDQQQQLE+NVEKLSKFIEEPFD Y DKV +IRMQVINL+VITD LC KMYECIENDLL
Sbjct: 438 EDQQQQLEANVEKLSKFIEEPFDQYEEDKVRDIRMQVINLSVITDTLCKKMYECIENDLL 497
Query: 1664 GCLQFETHNIAPYKSKGVEKASEL 1735
G LQ HNIAPYKSKG+E+ASEL
Sbjct: 498 GSLQHGIHNIAPYKSKGIERASEL 521
>ref|XP_002313070.1| predicted protein [Populus trichocarpa] gi|222849478|gb|EEE87025.1|
predicted protein [Populus trichocarpa]
Length = 591
Score = 798 bits (2061), Expect(2) = 0.0
Identities = 376/514 (73%), Positives = 432/514 (84%), Gaps = 5/514 (0%)
Frame = +2
Query: 227 SFDGIENDDDD---WTKSSKNPTCQVITRESLIAAQREDLRRVMELLGLSEQHARTLLIH 397
S DG+ ++DD W K T +VIT+ESL+AAQREDLRRVM+LL L E HARTLLIH
Sbjct: 23 SHDGLADNDDSALQWAPP-KGSTTKVITKESLLAAQREDLRRVMDLLSLKEHHARTLLIH 81
Query: 398 HRWDVQKLLADLVEKEKDRLFAEAGVTVLES-RCHFTSQSRSEETCYICMEDIPIEQVTT 574
+RWDV+KLLA LVEK K LF EAGVTV+E+ S S TC IC+ED + T
Sbjct: 82 YRWDVEKLLAVLVEKGKSCLFTEAGVTVVENVDDEVPPSSSSTITCDICIEDATADNATR 141
Query: 575 MDCGHCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAIVRNLVNARDPDLAERFE 754
M+CGHCFCNNCWTEHFI+KINEGQSRRI+CMAH+C+AICDEAIVRNLV+ R P+LAE+F+
Sbjct: 142 MECGHCFCNNCWTEHFIIKINEGQSRRIQCMAHRCSAICDEAIVRNLVSRRHPNLAEKFD 201
Query: 755 RFLLESYIEDNTMVKWCPSVPHCGNAIRVEDEIYCEVECACGLQFCFGCSSEAHSPCSCL 934
RFLLESYIEDN MVKWCPS+PHCG AIRVE++ +CEVEC+CGLQFCF C SEAHSPCSCL
Sbjct: 202 RFLLESYIEDNKMVKWCPSIPHCGKAIRVEEDEFCEVECSCGLQFCFSCLSEAHSPCSCL 261
Query: 935 MWKLWAKKCKDESETVNWMTVNTKPCPKCYKPVEKNGGCNLVSCICGQPFCWVCGGATGR 1114
MW+ W+KKC DESETVNW+TV+TKPCPKCYKPVEKNGGCNLVSCICGQ FCWVCGGATGR
Sbjct: 262 MWERWSKKCHDESETVNWITVHTKPCPKCYKPVEKNGGCNLVSCICGQSFCWVCGGATGR 321
Query: 1115 DHTWTSISGHSCGRYKEDTEKKAERAKRDLYRYMHYHNHYKAHTDSFKLEAKLKETIQGK 1294
DHTW+ I+GHSCGRYKED EK+ ERAKRDLYRYMHYHN +KAHTDSFKLE+KLKE+I K
Sbjct: 322 DHTWSRIAGHSCGRYKEDREKQTERAKRDLYRYMHYHNRFKAHTDSFKLESKLKESILDK 381
Query: 1295 ISILEDNSTSDKDCSWVTNGLYRLFRSRRVLSYSYPFAYYMFGDDLFKDEMTKEETERKQ 1474
+S+ E+ KD SWVTNGL RLFRSRRVLSYSYPFA+YMFG++ FKDEMT EE E K+
Sbjct: 382 VSVAEERELRLKDFSWVTNGLNRLFRSRRVLSYSYPFAFYMFGEEFFKDEMTDEEREIKK 441
Query: 1475 HLFEDQQQQLESNVEKLSKFIEEPFDTYAMDKVMEIRMQVINLTVITDRLCTKMYECIEN 1654
+LFEDQQQQLESNVEKLS F+EEPF ++ DKVM+IRM+VINL+V D LC KMYECIE+
Sbjct: 442 NLFEDQQQQLESNVEKLSMFLEEPFQQFSQDKVMDIRMRVINLSVTIDTLCQKMYECIES 501
Query: 1655 DLLGCLQFETHNIAPYKSKGVEKASEL-PVWSTK 1753
DLLG L TH+IAPYKSKG+E+ASEL W+TK
Sbjct: 502 DLLGSLHLGTHHIAPYKSKGIERASELSSCWNTK 535
Score = 47.8 bits (112), Expect(2) = 0.0
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +3
Query: 1866 GGTVEHNDPSGT-QNNERGCSSRKRTRREARGDGLFDLNLPA 1988
GGT EH+ PSG+ +++ GCS RKR ++E G G FDLNLPA
Sbjct: 546 GGTSEHDRPSGSGSSDDSGCSYRKRAKKE--GGGFFDLNLPA 585
>ref|XP_003537904.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1-like isoform 3
[Glycine max]
Length = 595
Score = 785 bits (2026), Expect(2) = 0.0
Identities = 366/510 (71%), Positives = 429/510 (84%), Gaps = 1/510 (0%)
Frame = +2
Query: 227 SFDGIENDDDDWTKSSKNPTCQVITRESLIAAQREDLRRVMELLGLSEQHARTLLIHHRW 406
S + END++ SSK T +VIT+ESL+AAQ+EDLRRVM++L + EQHARTLLI HRW
Sbjct: 20 SVEAYENDENYALLSSKGTTTKVITKESLLAAQKEDLRRVMDMLSVREQHARTLLIFHRW 79
Query: 407 DVQKLLADLVEKEKDRLFAEAGVTVLESRCHFTSQSRSEETCYICMEDIPIEQVTTMDCG 586
DV+ L LV+K K LFAEAGV+V E R + S CYICME++P + T MDCG
Sbjct: 80 DVENLFEVLVDKGKSFLFAEAGVSVDEHR-NSDSPVPPAFMCYICMEEVPSSKTTRMDCG 138
Query: 587 HCFCNNCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAIVRNLVNARDPDLAERFERFLL 766
HCFCN CW EHFIVKINEGQS+RIRCM HKCN+ICD+A+VR L++ P +AE++ERFLL
Sbjct: 139 HCFCNGCWIEHFIVKINEGQSKRIRCMEHKCNSICDDAVVRTLLSREHPHMAEKYERFLL 198
Query: 767 ESYIEDNTMVKWCPSVPHCGNAIRVEDEIYCEVECACGLQFCFGCSSEAHSPCSCLMWKL 946
ESYIEDN VKWCPS PHCGNAIRVED+ CEVEC+CG+QFCF C SEAHSPCSCLMW+L
Sbjct: 199 ESYIEDNKRVKWCPSTPHCGNAIRVEDDELCEVECSCGVQFCFSCLSEAHSPCSCLMWEL 258
Query: 947 WAKKCKDESETVNWMTVNTKPCPKCYKPVEKNGGCNLVSCICGQPFCWVCGGATGRDHTW 1126
WAKKC+DESETVNW+TV+TKPCPKC+KPVEKNGGCNLVSCICGQ FCW+CGGATGR+HTW
Sbjct: 259 WAKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTW 318
Query: 1127 TSISGHSCGRYKEDTEKKAERAKRDLYRYMHYHNHYKAHTDSFKLEAKLKETIQGKISIL 1306
+SI+GHSCGRYKE EK AERAKRDLYRYMHYHN YKAHTDSFK+E+KLKETIQGKI+I
Sbjct: 319 SSIAGHSCGRYKEQ-EKTAERAKRDLYRYMHYHNRYKAHTDSFKIESKLKETIQGKIAIS 377
Query: 1307 EDNSTSDKDCSWVTNGLYRLFRSRRVLSYSYPFAYYMFGDDLFKDEMTKEETERKQHLFE 1486
E+ ++ +D SWV NGL RLFRSRRVLSYSY FA+YMFGD+LFKDEMT + E KQ+LFE
Sbjct: 378 EEKDSTLRDYSWVNNGLSRLFRSRRVLSYSYAFAFYMFGDELFKDEMTDAQREIKQNLFE 437
Query: 1487 DQQQQLESNVEKLSKFIEEPFDTYAMDKVMEIRMQVINLTVITDRLCTKMYECIENDLLG 1666
DQQQQLE+NVEKLSK +EEPF+T++ DKV+EIRMQ++NL+ I D+LC KMYECIENDLLG
Sbjct: 438 DQQQQLEANVEKLSKILEEPFETFSDDKVVEIRMQILNLSTIIDKLCQKMYECIENDLLG 497
Query: 1667 CLQFETHNIAPYKSKGVEKASELPV-WSTK 1753
L H+IAPYKSKG+E+ASEL V W+ K
Sbjct: 498 SLNLGIHSIAPYKSKGIERASELSVGWNNK 527
Score = 44.7 bits (104), Expect(2) = 0.0
Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Frame = +3
Query: 1863 IGGTVEHNDPSGT-QNNERGCSSRKRTRREA-RGDGLFDLNLPA 1988
+G T E + PSG+ +++ GCSSRKR R+E G G FDLNLPA
Sbjct: 546 VGVTEELDRPSGSGSSDDNGCSSRKRARKEGLGGGGFFDLNLPA 589