BLASTX nr result

ID: Coptis24_contig00006165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006165
         (1378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610873.1| Diphthamide biosynthesis protein [Medicago t...   607   e-171
ref|XP_002265458.1| PREDICTED: diphthamide biosynthesis protein ...   602   e-170
ref|XP_003540663.1| PREDICTED: diphthamide biosynthesis protein ...   595   e-168
ref|XP_003533490.1| PREDICTED: diphthamide biosynthesis protein ...   593   e-167
ref|XP_004136856.1| PREDICTED: diphthamide biosynthesis protein ...   590   e-166

>ref|XP_003610873.1| Diphthamide biosynthesis protein [Medicago truncatula]
            gi|355512208|gb|AES93831.1| Diphthamide biosynthesis
            protein [Medicago truncatula]
          Length = 575

 Score =  607 bits (1564), Expect = e-171
 Identities = 288/419 (68%), Positives = 343/419 (81%), Gaps = 7/419 (1%)
 Frame = +2

Query: 140  FIKNQIPDSITNDPALNSSLSVLPSNYSFEVHKCIWRILTSGAKRVALQFPEGLLMYSLV 319
            FIKNQIPDSI NDP LN+++S+LPSNYSFEVHKC+WR+ ++ AKR+ALQFPEGLLMYSL+
Sbjct: 27   FIKNQIPDSILNDPLLNAAISILPSNYSFEVHKCVWRVRSTAAKRIALQFPEGLLMYSLI 86

Query: 320  LSDIFTTYGKLDDCFVLGDVTYGACCVDDFSATALGADLLIHYGHSCLIPIDSTKIPSLY 499
            LSDIFTT+  +  C+VLGDVTYGACC+DDFSA ALGA++LIHYGHSCL+PIDSTKIP LY
Sbjct: 87   LSDIFTTFAGVTHCYVLGDVTYGACCIDDFSAIALGAEILIHYGHSCLVPIDSTKIPCLY 146

Query: 500  VFVEIKIDVERLIDTVRLNIDEEQTKTKKLALAGTIQFSSAIRAAKPALENAGFEVLVPQ 679
            VFV+IKIDV+ L+DTV+LN  +     K++ LAGTIQF+S IRA KP LE  GF VLVPQ
Sbjct: 147  VFVDIKIDVDHLVDTVKLNSKDLGFMGKRVILAGTIQFASGIRAVKPELEKLGFRVLVPQ 206

Query: 680  SKPLSAGEVLGCTSPTIPKGSAD----VLIFVADGRFHLEAFMIANPGIKAFRYDPYLGV 847
            SKPLSAGE+LGCT+P + K   D    VL+FV+DGRFHLEAFMIANPG+KAFRYDPY+G 
Sbjct: 207  SKPLSAGEILGCTAPKVGKELDDKEESVLVFVSDGRFHLEAFMIANPGVKAFRYDPYVGK 266

Query: 848  LFLEEYDHDGMKKVRKNAIIKAREASRWGIILGTLGRQGNPRILKRLQSKMKERGFTWTT 1027
            LFLEEYDH GMK  RKNAI+KA+EA  WG++LGTLGRQGNP+IL+RL+ KM ++GF +T 
Sbjct: 267  LFLEEYDHVGMKGSRKNAILKAKEARNWGVVLGTLGRQGNPKILERLEMKMGDKGFDYTV 326

Query: 1028 ILMSEISPARIALFADSIDAWIQIACPRLSIDWGEAFEKPLLTPFEAEIALGFIPGWWEK 1207
            +LMSE+SP RI+LF DS+DAWIQIACPRLSIDWG+AF KP+LTPFEAEIALG IPGWWEK
Sbjct: 327  VLMSELSPYRISLFEDSVDAWIQIACPRLSIDWGDAFVKPVLTPFEAEIALGLIPGWWEK 386

Query: 1208 SSL-NSNCMNGTECGSKSCCSSNE--EKIVVADAATDYPMDYYAKNGGEWNSAYSNKSS 1375
            + +    C + T C    CCS+          D   DYPMDYYA++GGEWNS+Y  K S
Sbjct: 387  TQVQKQGCEDVTGCNKSDCCSNGSCGNAKATEDFGGDYPMDYYAQDGGEWNSSYMKKPS 445


>ref|XP_002265458.1| PREDICTED: diphthamide biosynthesis protein 1-like [Vitis vinifera]
          Length = 461

 Score =  602 bits (1551), Expect = e-170
 Identities = 298/417 (71%), Positives = 345/417 (82%), Gaps = 5/417 (1%)
 Frame = +2

Query: 140  FIKNQIPDSITNDPALNSSLSVLPSNYSFEVHKCIWRILTSGAKRVALQFPEGLLMYSLV 319
            F+KNQIPDSI N+ ALN+++++LPSNY+FEVHKC+WRIL+S AKRVALQFPEGLLMYSL 
Sbjct: 33   FVKNQIPDSIINNAALNAAIALLPSNYNFEVHKCVWRILSSRAKRVALQFPEGLLMYSLH 92

Query: 320  LSDIFTTYGKLDDCFVLGDVTYGACCVDDFSATALGADLLIHYGHSCLIPIDSTKIPSLY 499
            LSDIFT+Y   D C VLGDVTYGACCVDD SA AL ADLLIHYGHSCL+PID+T IP LY
Sbjct: 93   LSDIFTSYAGADHCLVLGDVTYGACCVDDLSAAALEADLLIHYGHSCLVPIDATSIPCLY 152

Query: 500  VFVEIKIDVERLIDTVRLNIDEEQTKTKKLALAGTIQFSSAIRAAKPALENAGFEVLVPQ 679
            VFVEI IDV+ LI TV+LN+        ++ LAGTIQFSSAIRAAKP LE AGF VL+PQ
Sbjct: 153  VFVEIAIDVDLLIGTVKLNLPP----AGQIVLAGTIQFSSAIRAAKPELEKAGFRVLIPQ 208

Query: 680  SKPLSAGEVLGCTSPTIPKGS--AD--VLIFVADGRFHLEAFMIANPGIKAFRYDPYLGV 847
            SKPLSAGEVLGCT+P I K S  +D  V +FVADGRFHLEAFMIANP IKA+RYDPY+G 
Sbjct: 209  SKPLSAGEVLGCTAPKISKTSFISDDVVAVFVADGRFHLEAFMIANPAIKAYRYDPYIGR 268

Query: 848  LFLEEYDHDGMKKVRKNAIIKAREASRWGIILGTLGRQGNPRILKRLQSKMKERGFTWTT 1027
            L LEEYDH GMK  RKNAI+KARE   WGI+LGTLGRQGNPRIL  LQ +M+E+GF+WT 
Sbjct: 269  LLLEEYDHKGMKDSRKNAILKAREGKNWGIVLGTLGRQGNPRILNMLQDRMREKGFSWTV 328

Query: 1028 ILMSEISPARIALFADSIDAWIQIACPRLSIDWGEAFEKPLLTPFEAEIALGFIPGWWEK 1207
            +LMSEISPAR+ LF DS+DAWIQIACPRLSIDWG+AF KPLL PFEAEIALGFIPGWWEK
Sbjct: 329  VLMSEISPARVLLFGDSVDAWIQIACPRLSIDWGDAFGKPLLNPFEAEIALGFIPGWWEK 388

Query: 1208 SSL-NSNCMNGTECGSKSCCSSNEEKIVVADAATDYPMDYYAKNGGEWNSAYSNKSS 1375
            +S+ NS+C+    C + +C +    K  V D + DYPMDYYA++GGEWNS+Y+ KS+
Sbjct: 389  ASIANSDCIKNGLCCNDNCDNGVCAKDKV-DVSQDYPMDYYAQDGGEWNSSYAKKST 444


>ref|XP_003540663.1| PREDICTED: diphthamide biosynthesis protein 1-like [Glycine max]
          Length = 459

 Score =  595 bits (1535), Expect = e-168
 Identities = 295/423 (69%), Positives = 343/423 (81%), Gaps = 11/423 (2%)
 Frame = +2

Query: 140  FIKNQIPDSITNDPALNSSLSVLPSNYSFEVHKCIWRILTSGAKRVALQFPEGLLMYSLV 319
            F+KNQIPDSI N+P L++++SVLPSNY+FEVHKC+WR+L++GAKRVALQFPEGLLMYSL 
Sbjct: 29   FVKNQIPDSILNNPLLSAAISVLPSNYNFEVHKCVWRVLSTGAKRVALQFPEGLLMYSLP 88

Query: 320  LSDIFTTYGKLDDCFVLGDVTYGACCVDDFSATALGADLLIHYGHSCLIPIDSTKIPSLY 499
            LSDIFTT+  +  CFVL DVTYGACCVDD +A+ALGADLLIHYGHSCL+PID+T IP LY
Sbjct: 89   LSDIFTTFAGVTHCFVLADVTYGACCVDDLAASALGADLLIHYGHSCLVPIDATTIPCLY 148

Query: 500  VFVEIKIDVERLIDTVRLNIDEEQTKTKKLALAGTIQFSSAIRAAKPALENAGFEVLVPQ 679
            VFV+IKIDV   +DT+ LN+     +TK L +AGTIQF+SAIRAAKP LE  GF VL+PQ
Sbjct: 149  VFVDIKIDVPHFVDTLSLNL---LAQTKTLVVAGTIQFASAIRAAKPQLEELGFRVLIPQ 205

Query: 680  SKPLSAGEVLGCTSPTIPK-----GSAD----VLIFVADGRFHLEAFMIANPGIKAFRYD 832
            SKPLSAGEVLGCT+P +       G  D    VL+FVADGRFHLEAFMIANPGI+AFRYD
Sbjct: 206  SKPLSAGEVLGCTAPKVSSSKLLGGGGDIGECVLVFVADGRFHLEAFMIANPGIRAFRYD 265

Query: 833  PYLGVLFLEEYDHDGMKKVRKNAIIKAREASRWGIILGTLGRQGNPRILKRLQSKMKERG 1012
            PY+G LFLEEYDH GMK+ RKNAI KAREA  WG++LGTLGRQGNPRIL+RL+  M+ERG
Sbjct: 266  PYMGKLFLEEYDHLGMKRSRKNAIFKAREARSWGLVLGTLGRQGNPRILERLERMMRERG 325

Query: 1013 FTWTTILMSEISPARIALFADSIDAWIQIACPRLSIDWGEAFEKPLLTPFEAEIALGFIP 1192
              +T +LMSE+SP RIALF DS+DAWIQIACPRLSIDWGEAF KP+LTPFEAE+ALG IP
Sbjct: 326  LDYTVVLMSEMSPTRIALFEDSLDAWIQIACPRLSIDWGEAFVKPVLTPFEAEVALGVIP 385

Query: 1193 GWWEKSSLNSNCMNGTECGSK--SCCSSNEEKIVVADAATDYPMDYYAKNGGEWNSAYSN 1366
            GWWEK   N  C  G  C +K  SCC   E+     D   DYPMDYYA++GGEWNS+Y  
Sbjct: 386  GWWEK---NEVCEEGEGCCNKSGSCC---EDAKGGEDFGGDYPMDYYAQDGGEWNSSYVK 439

Query: 1367 KSS 1375
            KS+
Sbjct: 440  KST 442


>ref|XP_003533490.1| PREDICTED: diphthamide biosynthesis protein 1-like [Glycine max]
          Length = 467

 Score =  593 bits (1528), Expect = e-167
 Identities = 291/419 (69%), Positives = 341/419 (81%), Gaps = 7/419 (1%)
 Frame = +2

Query: 140  FIKNQIPDSITNDPALNSSLSVLPSNYSFEVHKCIWRILTSGAKRVALQFPEGLLMYSLV 319
            F+KNQIP+SI NDP LN+++SVLPSNY+FEVHKC+WR+L+SGAKRVALQFPEGLLMYSL 
Sbjct: 37   FVKNQIPESILNDPVLNAAISVLPSNYNFEVHKCVWRVLSSGAKRVALQFPEGLLMYSLP 96

Query: 320  LSDIFTTYGKLDDCFVLGDVTYGACCVDDFSATALGADLLIHYGHSCLIPIDSTKIPSLY 499
            LSDI T++  +  C+VLGDVTYGACCVDD +A+ALGADLLIHYGHSCL+PIDST IP LY
Sbjct: 97   LSDILTSFAAVTHCYVLGDVTYGACCVDDLAASALGADLLIHYGHSCLVPIDSTTIPCLY 156

Query: 500  VFVEIKIDVERLIDTVRLNIDEEQTKTKKLALAGTIQFSSAIRAAKPALENAGFEVLVPQ 679
            +FV+IKIDV   +DT+ LN+     K K L +AGTIQF+SAIR AKP LE  GF VL+PQ
Sbjct: 157  IFVDIKIDVPHFVDTLILNLH----KAKTLVIAGTIQFASAIRTAKPQLEELGFRVLIPQ 212

Query: 680  SKPLSAGEVLGCTSPTIPK------GSADVLIFVADGRFHLEAFMIANPGIKAFRYDPYL 841
            SKPLSAGEVLGCT+P +        G + VL+FVADGRFHLEAFMIANPGI+AFRYDPY+
Sbjct: 213  SKPLSAGEVLGCTAPKVSSKLLGDDGESSVLVFVADGRFHLEAFMIANPGIRAFRYDPYM 272

Query: 842  GVLFLEEYDHDGMKKVRKNAIIKAREASR-WGIILGTLGRQGNPRILKRLQSKMKERGFT 1018
            G LFLEEYDH GMK+ RKNAI KARE +R WG++LGTLGRQGNPRIL+RL+  M++RGF 
Sbjct: 273  GKLFLEEYDHLGMKRSRKNAIFKAREEARSWGLVLGTLGRQGNPRILERLEKMMRDRGFD 332

Query: 1019 WTTILMSEISPARIALFADSIDAWIQIACPRLSIDWGEAFEKPLLTPFEAEIALGFIPGW 1198
            +T +LMSE+SPARIALF DSIDAWIQIACPRLSIDWGEAF KP+LTPFEA+IALG IPGW
Sbjct: 333  YTVVLMSEMSPARIALFEDSIDAWIQIACPRLSIDWGEAFVKPVLTPFEADIALGVIPGW 392

Query: 1199 WEKSSLNSNCMNGTECGSKSCCSSNEEKIVVADAATDYPMDYYAKNGGEWNSAYSNKSS 1375
            WEK+       N   C +KS     + K    D   DYPMDYYA++GGEWNS+Y  KS+
Sbjct: 393  WEKN-------NEVVCCNKSGSCCGDAKGGGEDFGGDYPMDYYAQDGGEWNSSYVIKST 444


>ref|XP_004136856.1| PREDICTED: diphthamide biosynthesis protein 1-like [Cucumis sativus]
            gi|449478949|ref|XP_004155462.1| PREDICTED: diphthamide
            biosynthesis protein 1-like [Cucumis sativus]
          Length = 462

 Score =  590 bits (1520), Expect = e-166
 Identities = 287/416 (68%), Positives = 340/416 (81%), Gaps = 6/416 (1%)
 Frame = +2

Query: 140  FIKNQIPDSITNDPALNSSLSVLPSNYSFEVHKCIWRILTSGAKRVALQFPEGLLMYSLV 319
            F+KNQIPDSI NDPALN+++S+LPSNY+FEVHKC+WRIL+S A RVALQ PEGLLMYSL+
Sbjct: 34   FVKNQIPDSILNDPALNAAISLLPSNYNFEVHKCVWRILSSSASRVALQLPEGLLMYSLI 93

Query: 320  LSDIFTTYGKLDDCFVLGDVTYGACCVDDFSATALGADLLIHYGHSCLIPIDSTKIPSLY 499
            LSDI TT+GK   CFVLGDVT+GACCVDD SA+AL ADLL+HYGHSCL+PIDST IP LY
Sbjct: 94   LSDILTTFGKASHCFVLGDVTFGACCVDDLSASALHADLLVHYGHSCLVPIDSTTIPCLY 153

Query: 500  VFVEIKIDVERLIDTVRLNIDEEQTKTKKLALAGTIQFSSAIRAAKPALENAGFEVLVPQ 679
            VFV+I IDV RL++TVRLN+D     +  L LAGTIQF+SAIRA+K  LE  G  VL+PQ
Sbjct: 154  VFVDIAIDVPRLVNTVRLNVD--CLDSTNLVLAGTIQFASAIRASKMELERHGIRVLIPQ 211

Query: 680  SKPLSAGEVLGCTSPTIPKGS-----ADVLIFVADGRFHLEAFMIANPGIKAFRYDPYLG 844
            S+PLSAGEVLGCT+P +   +       V IFVADGRFHLEAFMIANPGI+ FRYDPY+G
Sbjct: 212  SRPLSAGEVLGCTAPKVSTAAFGNNGETVAIFVADGRFHLEAFMIANPGIRVFRYDPYIG 271

Query: 845  VLFLEEYDHDGMKKVRKNAIIKAREASRWGIILGTLGRQGNPRILKRLQSKMKERGFTWT 1024
             L LEEYDH+GMK  RK AI+KA+EA+ WGI+LGTLGRQGNP+IL+RL+ KMK +GF +T
Sbjct: 272  KLLLEEYDHEGMKASRKGAILKAKEATNWGIVLGTLGRQGNPKILERLEEKMKSKGFDYT 331

Query: 1025 TILMSEISPARIALFADSIDAWIQIACPRLSIDWGEAFEKPLLTPFEAEIALGFIPGWWE 1204
             +LMSEISP R+ALF DS+DAWIQIACPRLSIDWG+AF KPLLTPFEAE+ALG IPGWWE
Sbjct: 332  VVLMSEISPYRVALFEDSVDAWIQIACPRLSIDWGDAFAKPLLTPFEAEVALGLIPGWWE 391

Query: 1205 K-SSLNSNCMNGTECGSKSCCSSNEEKIVVADAATDYPMDYYAKNGGEWNSAYSNK 1369
            + SS   +C +  ECG       N ++I  A+A  +YPMDYYA++GGEWNS+Y  K
Sbjct: 392  RTSSAKLSCNDCRECG------CNGDEINKAEAEGEYPMDYYAQDGGEWNSSYVKK 441


Top