BLASTX nr result

ID: Coptis24_contig00005990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005990
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46757.1| syntaxin-like protein [Solanum tuberosum]              129   2e-28
ref|XP_003516995.1| PREDICTED: syntaxin-22-like [Glycine max]         125   3e-27
ref|NP_001235989.1| syntaxin [Glycine max] gi|22597174|gb|AAN034...   125   3e-27
ref|XP_003534285.1| PREDICTED: syntaxin-22-like [Glycine max]         124   6e-27
gb|ACU18736.1| unknown [Glycine max]                                  123   1e-26

>gb|ABA46757.1| syntaxin-like protein [Solanum tuberosum]
          Length = 273

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/72 (86%), Positives = 67/72 (93%)
 Frame = -2

Query: 216 MSFQDLEAGRAIGSRRGYTNGTQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELR 37
           MSFQDLEAGR +G RRGY NG QDPTQAVASG+FQINTAVSTFQRLVNTLGTPKDTPELR
Sbjct: 1   MSFQDLEAGRPLGPRRGYMNGKQDPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELR 60

Query: 36  DKLQKTRLHIGR 1
           +KL KTR+HIG+
Sbjct: 61  EKLHKTRVHIGQ 72


>ref|XP_003516995.1| PREDICTED: syntaxin-22-like [Glycine max]
          Length = 273

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/72 (84%), Positives = 65/72 (90%)
 Frame = -2

Query: 216 MSFQDLEAGRAIGSRRGYTNGTQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELR 37
           MSFQD+EAGR+  SRR   NG QDPTQAVASG+FQINTAVSTFQRLVNTLGTPKDTPELR
Sbjct: 1   MSFQDIEAGRSFASRRNLINGKQDPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELR 60

Query: 36  DKLQKTRLHIGR 1
           DKL KTRLHIG+
Sbjct: 61  DKLHKTRLHIGQ 72


>ref|NP_001235989.1| syntaxin [Glycine max] gi|22597174|gb|AAN03474.1| syntaxin [Glycine
           max]
          Length = 273

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/72 (83%), Positives = 66/72 (91%)
 Frame = -2

Query: 216 MSFQDLEAGRAIGSRRGYTNGTQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELR 37
           MSFQD+EAGR  GSRRG  NG QDPTQAVA+G+FQINTAVSTFQRLVNTLGTPKDTP+LR
Sbjct: 1   MSFQDIEAGRPFGSRRGLMNGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPDLR 60

Query: 36  DKLQKTRLHIGR 1
           +KL KTRLHIG+
Sbjct: 61  EKLHKTRLHIGQ 72


>ref|XP_003534285.1| PREDICTED: syntaxin-22-like [Glycine max]
          Length = 273

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/72 (83%), Positives = 65/72 (90%)
 Frame = -2

Query: 216 MSFQDLEAGRAIGSRRGYTNGTQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELR 37
           MSFQD+EAGR+  +RR   NG QDPTQAVASG+FQINTAVSTFQRLVNTLGTPKDTPELR
Sbjct: 1   MSFQDIEAGRSFAARRNLINGKQDPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELR 60

Query: 36  DKLQKTRLHIGR 1
           DKL KTRLHIG+
Sbjct: 61  DKLHKTRLHIGQ 72


>gb|ACU18736.1| unknown [Glycine max]
          Length = 273

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/72 (81%), Positives = 65/72 (90%)
 Frame = -2

Query: 216 MSFQDLEAGRAIGSRRGYTNGTQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELR 37
           MSFQD+EAGR   SRRG  NG QDPTQAVA+G+FQINTAVSTFQRLVNTLGTPKDTP+LR
Sbjct: 1   MSFQDIEAGRPFSSRRGLMNGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPDLR 60

Query: 36  DKLQKTRLHIGR 1
           +KL KTRLHIG+
Sbjct: 61  EKLHKTRLHIGQ 72


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