BLASTX nr result

ID: Coptis24_contig00005953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005953
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306416.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_003596166.1| Elongation factor EF-2 [Medicago truncatula]...   142   3e-32
ref|XP_003596186.1| Elongation factor EF-2 [Medicago truncatula]...   142   3e-32
gb|AFK64817.1| translation elongation factor 2 [Prunus persica]       141   5e-32
ref|XP_003546795.1| PREDICTED: elongation factor 2-like [Glycine...   141   5e-32

>ref|XP_002306416.1| predicted protein [Populus trichocarpa] gi|222855865|gb|EEE93412.1|
            predicted protein [Populus trichocarpa]
          Length = 843

 Score =  142 bits (359), Expect = 2e-32
 Identities = 72/100 (72%), Positives = 81/100 (81%), Gaps = 6/100 (6%)
 Frame = +3

Query: 3    VIYASQITGNPRLVEPIYLVEIQAPKQALACIYRVLNQRRGCLIDEVQIQGTPLYKIQAH 182
            VIYASQIT  PRL+EP+YLVEIQAP+QAL  IY VLNQ+RG + +E+Q  GTPLY I+A+
Sbjct: 713  VIYASQITAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAY 772

Query: 183  FPV------SAQLRAATSGQAFPQCVFDHWDMMSSDPLEA 284
             PV      S  LRAATSGQAFPQCVFDHWDMMSSDPLEA
Sbjct: 773  LPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEA 812


>ref|XP_003596166.1| Elongation factor EF-2 [Medicago truncatula]
            gi|355485214|gb|AES66417.1| Elongation factor EF-2
            [Medicago truncatula]
          Length = 843

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/100 (70%), Positives = 82/100 (82%), Gaps = 6/100 (6%)
 Frame = +3

Query: 3    VIYASQITGNPRLVEPIYLVEIQAPKQALACIYRVLNQRRGCLIDEVQIQGTPLYKIQAH 182
            V YASQ+T  PRL+EP+Y+VEIQAP+QAL  IY VLNQ+RG + +E+Q  GTPLY I+A+
Sbjct: 713  VFYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAY 772

Query: 183  FPV------SAQLRAATSGQAFPQCVFDHWDMMSSDPLEA 284
             PV      S+QLRAATSGQAFPQCVFDHWDMMSSDPLEA
Sbjct: 773  LPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMSSDPLEA 812


>ref|XP_003596186.1| Elongation factor EF-2 [Medicago truncatula]
            gi|355485234|gb|AES66437.1| Elongation factor EF-2
            [Medicago truncatula]
          Length = 843

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/100 (70%), Positives = 82/100 (82%), Gaps = 6/100 (6%)
 Frame = +3

Query: 3    VIYASQITGNPRLVEPIYLVEIQAPKQALACIYRVLNQRRGCLIDEVQIQGTPLYKIQAH 182
            V YASQ+T  PRL+EP+Y+VEIQAP+QAL  IY VLNQ+RG + +E+Q  GTPLY I+A+
Sbjct: 713  VFYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAY 772

Query: 183  FPV------SAQLRAATSGQAFPQCVFDHWDMMSSDPLEA 284
             PV      S+QLRAATSGQAFPQCVFDHWDMMSSDPLEA
Sbjct: 773  LPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMSSDPLEA 812


>gb|AFK64817.1| translation elongation factor 2 [Prunus persica]
          Length = 843

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/100 (70%), Positives = 82/100 (82%), Gaps = 6/100 (6%)
 Frame = +3

Query: 3    VIYASQITGNPRLVEPIYLVEIQAPKQALACIYRVLNQRRGCLIDEVQIQGTPLYKIQAH 182
            VIYASQ+T  PRL+EP+YLVEIQAP+QAL  IY VLNQ+RG + +E+Q  GTPLY I+A+
Sbjct: 713  VIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAY 772

Query: 183  FPV------SAQLRAATSGQAFPQCVFDHWDMMSSDPLEA 284
             PV      S QLRA+TSGQAFPQCVFDHW+MMSSDPLEA
Sbjct: 773  LPVIESFGFSGQLRASTSGQAFPQCVFDHWEMMSSDPLEA 812


>ref|XP_003546795.1| PREDICTED: elongation factor 2-like [Glycine max]
          Length = 843

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/100 (71%), Positives = 81/100 (81%), Gaps = 6/100 (6%)
 Frame = +3

Query: 3    VIYASQITGNPRLVEPIYLVEIQAPKQALACIYRVLNQRRGCLIDEVQIQGTPLYKIQAH 182
            V YASQIT  PRL+EP+YLVEIQAP+QAL  IY VLNQ+RG + +E+Q  GTPLY I+A+
Sbjct: 713  VFYASQITAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAY 772

Query: 183  FPV------SAQLRAATSGQAFPQCVFDHWDMMSSDPLEA 284
             PV      S+ LRAATSGQAFPQCVFDHWDMMSSDPLEA
Sbjct: 773  LPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEA 812


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