BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005935
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
emb|CBI21098.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002515462.1| hypothetical protein RCOM_0922570 [Ricinus c...    79   4e-13
ref|XP_004157124.1| PREDICTED: aberrant root formation protein 4...    75   4e-12
ref|NP_196664.3| Aberrant root formation protein 4 [Arabidopsis ...    75   6e-12

>ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|222854664|gb|EEE92211.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = +1

Query: 34  VEFIDNXXXXXXXXXXXXSKE-NAVKTLNHLLAFISSPSLNQVVVDALSFVLPKLVFRFL 210
           V+FID+             ++ NAV+ L+    F+ SPSL+Q V+DALSF LPK V +F 
Sbjct: 8   VDFIDSVSDSAVSNHEDSDEQGNAVEVLSETHKFLLSPSLDQAVIDALSFELPKAVSKFA 67

Query: 211 SVSKELFQIGERILDRLISTCSPRDMLTVICEVLDTHKGM 330
            +S E  +I + I+D  I  CSPRDML ++CE LD+  GM
Sbjct: 68  GLSNECLRIADSIIDFFIENCSPRDMLPILCEALDSWNGM 107


>emb|CBI21098.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/85 (45%), Positives = 57/85 (67%)
 Frame = +1

Query: 88  SKENAVKTLNHLLAFISSPSLNQVVVDALSFVLPKLVFRFLSVSKELFQIGERILDRLIS 267
           S+ NA++ L+ +  +I  P L+Q VVDALSF LPK V +F  VS +  +I E I+++ ++
Sbjct: 66  SRNNALEVLSEIHLYICQPLLDQAVVDALSFELPKAVAKFACVSGKCLEIVESIVNQFVA 125

Query: 268 TCSPRDMLTVICEVLDTHKGMCKEP 342
           TCSPRD++ + CE LD   GM K P
Sbjct: 126 TCSPRDLIPIFCEALDVPSGMSKAP 150


>ref|XP_002515462.1| hypothetical protein RCOM_0922570 [Ricinus communis]
           gi|223545406|gb|EEF46911.1| hypothetical protein
           RCOM_0922570 [Ricinus communis]
          Length = 196

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/72 (51%), Positives = 52/72 (72%)
 Frame = +1

Query: 97  NAVKTLNHLLAFISSPSLNQVVVDALSFVLPKLVFRFLSVSKELFQIGERILDRLISTCS 276
           NA++ L+ +  F+  PSL+Q V+DALSF LPK   +F  +S +  +I +RI+DR I TCS
Sbjct: 64  NALQILSEIHRFLLCPSLDQEVIDALSFDLPKATSKFAGLSGKCLEIADRIIDRFIETCS 123

Query: 277 PRDMLTVICEVL 312
           PRDML+V+CE L
Sbjct: 124 PRDMLSVLCEAL 135


>ref|XP_004157124.1| PREDICTED: aberrant root formation protein 4-like [Cucumis sativus]
          Length = 611

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
 Frame = +1

Query: 88  SKENAVKTLNHLLAFISSPSLNQVVVDALSFVLPKLVFRFLSVSKELFQIGERILDRLIS 267
           ++ +A + LN +  FISSPSL+Q  +D LSF LPK V +F+ V   L +I + I+DR ++
Sbjct: 74  TESDASEVLNEIYQFISSPSLDQGTIDTLSFDLPKAVSKFIRVGGCL-EIVDSIIDRFVT 132

Query: 268 TCSPRDMLTVICEVLD---THKGMCKEP 342
            CSPRDML+V+CE LD   T+   C  P
Sbjct: 133 LCSPRDMLSVLCEALDLQTTNATNCAAP 160


>ref|NP_196664.3| Aberrant root formation protein 4 [Arabidopsis thaliana]
           gi|28416705|gb|AAO42883.1| At5g11030 [Arabidopsis
           thaliana] gi|110743215|dbj|BAE99498.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332004242|gb|AED91625.1| Aberrant root formation
           protein 4 [Arabidopsis thaliana]
          Length = 578

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 32/70 (45%), Positives = 49/70 (70%)
 Frame = +1

Query: 106 KTLNHLLAFISSPSLNQVVVDALSFVLPKLVFRFLSVSKELFQIGERILDRLISTCSPRD 285
           + L+ +L  +SSP ++Q V+DALSF LPK+  +F  +S    Q+ E I+DR +  C+PRD
Sbjct: 75  EVLDEILKVLSSPQMDQDVIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRD 134

Query: 286 MLTVICEVLD 315
           ML+++CE LD
Sbjct: 135 MLSILCEALD 144