BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005933
         (1219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   134   6e-29
emb|CBI34862.3| unnamed protein product [Vitis vinifera]              134   6e-29
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   132   1e-28
ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-bindin...   131   4e-28
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   131   4e-28

>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  134 bits (336), Expect = 6e-29
 Identities = 63/99 (63%), Positives = 78/99 (78%)
 Frame = +1

Query: 1    KTKKIFVGGIPTTVTEDELKEFFAKFGDVKEHMIMRDHATSRSRGFGFITFETEQSVDGL 180
            KTKKIFVGGIP TVTE+E K+FF ++G+VK+H IMRDH+TSRSRGFGF+TF+TEQ+VD L
Sbjct: 2114 KTKKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDL 2173

Query: 181  LSKGNKIEMAGAQVEIXXXXXXXXXXXXXXXXRFNDSRP 297
            LS+GNK+E+AGAQVEI                R++DSRP
Sbjct: 2174 LSQGNKLELAGAQVEIKKAEPKKPNPPVPPSRRYSDSRP 2212


>emb|CBI34862.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score =  134 bits (336), Expect = 6e-29
 Identities = 63/99 (63%), Positives = 78/99 (78%)
 Frame = +1

Query: 1   KTKKIFVGGIPTTVTEDELKEFFAKFGDVKEHMIMRDHATSRSRGFGFITFETEQSVDGL 180
           KTKKIFVGGIP TVTE+E K+FF ++G+VK+H IMRDH+TSRSRGFGF+TF+TEQ+VD L
Sbjct: 127 KTKKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDL 186

Query: 181 LSKGNKIEMAGAQVEIXXXXXXXXXXXXXXXXRFNDSRP 297
           LS+GNK+E+AGAQVEI                R++DSRP
Sbjct: 187 LSQGNKLELAGAQVEIKKAEPKKPNPPVPPSRRYSDSRP 225


>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
            gi|223539369|gb|EEF40960.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 2256

 Score =  132 bits (333), Expect = 1e-28
 Identities = 65/99 (65%), Positives = 76/99 (76%)
 Frame = +1

Query: 1    KTKKIFVGGIPTTVTEDELKEFFAKFGDVKEHMIMRDHATSRSRGFGFITFETEQSVDGL 180
            KTKKIFVGGIPTTVTE E KEFF ++G+V EH IMRDH+T+RSRGFGFITF+TEQ+VD L
Sbjct: 2013 KTKKIFVGGIPTTVTEVEFKEFFMQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQAVDDL 2072

Query: 181  LSKGNKIEMAGAQVEIXXXXXXXXXXXXXXXXRFNDSRP 297
            L+KGNK+E+AG QVEI                R+NDSRP
Sbjct: 2073 LAKGNKLELAGGQVEIKKAEPKKPNPPLPSSKRYNDSRP 2111



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 27/76 (35%), Positives = 45/76 (59%)
 Frame = +1

Query: 1    KTKKIFVGGIPTTVTEDELKEFFAKFGDVKEHMIMRDHATSRSRGFGFITFETEQSVDGL 180
            + +KIF+GG+    T  +  + F K+G++ + +IM+D  T + RGFGF+T+     VD +
Sbjct: 1925 RRRKIFIGGLARETTTAQFVKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQV 1984

Query: 181  LSKGNKIEMAGAQVEI 228
            +   + I   G QVEI
Sbjct: 1985 IQDSHVIN--GKQVEI 1998


>ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like,
           partial [Cucumis sativus]
          Length = 270

 Score =  131 bits (329), Expect = 4e-28
 Identities = 64/99 (64%), Positives = 76/99 (76%)
 Frame = +1

Query: 1   KTKKIFVGGIPTTVTEDELKEFFAKFGDVKEHMIMRDHATSRSRGFGFITFETEQSVDGL 180
           KTKKIFVGGIPT+V EDE ++FF ++G VKEH IMRDH+TSRSRGFGFITFETEQ+VD L
Sbjct: 92  KTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDL 151

Query: 181 LSKGNKIEMAGAQVEIXXXXXXXXXXXXXXXXRFNDSRP 297
           L+ GN++EMAG+QVEI                RF+DSRP
Sbjct: 152 LANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRP 190



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 28/74 (37%), Positives = 43/74 (58%)
 Frame = +1

Query: 7   KKIFVGGIPTTVTEDELKEFFAKFGDVKEHMIMRDHATSRSRGFGFITFETEQSVDGLLS 186
           +KIFVGG+P   T  +  + F  +G++ + +IM+D  T   RGFGF+T+     VD ++ 
Sbjct: 6   RKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE 65

Query: 187 KGNKIEMAGAQVEI 228
             + I   G QVEI
Sbjct: 66  DTHIIN--GKQVEI 77


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
            210-like [Cucumis sativus]
          Length = 2257

 Score =  131 bits (329), Expect = 4e-28
 Identities = 64/99 (64%), Positives = 76/99 (76%)
 Frame = +1

Query: 1    KTKKIFVGGIPTTVTEDELKEFFAKFGDVKEHMIMRDHATSRSRGFGFITFETEQSVDGL 180
            KTKKIFVGGIPT+V EDE ++FF ++G VKEH IMRDH+TSRSRGFGFITFETEQ+VD L
Sbjct: 2007 KTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDL 2066

Query: 181  LSKGNKIEMAGAQVEIXXXXXXXXXXXXXXXXRFNDSRP 297
            L+ GN++EMAG+QVEI                RF+DSRP
Sbjct: 2067 LANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRP 2105



 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 28/73 (38%), Positives = 42/73 (57%)
 Frame = +1

Query: 10   KIFVGGIPTTVTEDELKEFFAKFGDVKEHMIMRDHATSRSRGFGFITFETEQSVDGLLSK 189
            KIFVGG+P   T  +  + F  +G++ + +IM+D  T   RGFGF+T+     VD ++  
Sbjct: 1922 KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED 1981

Query: 190  GNKIEMAGAQVEI 228
             + I   G QVEI
Sbjct: 1982 THIIN--GKQVEI 1992