BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005932
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617955.1| F-box/kelch-repeat protein [Medicago truncat...    59   5e-07
gb|ACH54100.1| SFBB13-beta [Pyrus x bretschneideri]                    55   6e-06
ref|XP_003596010.1| F-box protein [Medicago truncatula] gi|35548...    54   1e-05

>ref|XP_003617955.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355519290|gb|AET00914.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 386

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +3

Query: 6   FEVWVLNEYGVKESWTKLYKVGPFVRSSPIGLSRNGDNFFLTTEFKPCIYNFLTQNI-MY 182
           F + +L E GVKESWTKL+ +       PIG+S+NGD FF   + +   +N  TQ I  +
Sbjct: 304 FHISILGEVGVKESWTKLFTIKLHDIGWPIGVSKNGDIFFRKNDDELVCFNLSTQRIQQF 363

Query: 183 PVQETWGSDIVYKVAIYNDSLVSIDR 260
            V+  + S I+     Y +SLVSI+R
Sbjct: 364 GVKGGYYSQII----TYKESLVSIER 385


>gb|ACH54100.1| SFBB13-beta [Pyrus x bretschneideri]
          Length = 395

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/87 (32%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
 Frame = +3

Query: 6   FEVWVLNEY-GVKESWTKLYKVGPFVRS-SPIGLSRNGDNFFLTTEFKPCIYNFLTQNIM 179
           FE+WV+++Y GVK SWTKL  +GPF  + +P+   ++ +   +T++ +   YN  T N+ 
Sbjct: 309 FEIWVMDDYHGVKSSWTKLLAIGPFKHNENPLTFWKSDEFLMVTSDRRVTSYNSSTGNLK 368

Query: 180 YPVQETWGSDIV-YKVAIYNDSLVSID 257
           YP+     ++++  +  IY +S+V ++
Sbjct: 369 YPLIPPIMNEVIDLQALIYVESIVPVN 395


>ref|XP_003596010.1| F-box protein [Medicago truncatula] gi|355485058|gb|AES66261.1|
           F-box protein [Medicago truncatula]
          Length = 390

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
 Frame = +3

Query: 6   FEVWVLNEYGVKESWTKLYKVGPFVR--SSPIGLSRNGDNFFLTTEFKPCIYNFLTQNI- 176
           F++ +L E GV ESWTKL+ +GP       PIG+ RNGD FF   + K   Y+  T+ + 
Sbjct: 297 FDILILGELGVSESWTKLFTIGPLPSYIQEPIGVGRNGDIFFQKKDKKIVCYDLSTRMVE 356

Query: 177 -MYPVQETWGSDIVYKVAIYNDS 242
               ++E   + I+YK   ++ S
Sbjct: 357 EELGLEEAPSNRIIYKKEWFDKS 379