BLASTX nr result

ID: Coptis24_contig00005913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005913
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280261.2| PREDICTED: uncharacterized protein LOC100262...   266   8e-69
emb|CAN78123.1| hypothetical protein VITISV_041548 [Vitis vinifera]   266   8e-69
ref|XP_002329129.1| predicted protein [Populus trichocarpa] gi|2...   247   4e-63
ref|XP_002285047.1| PREDICTED: uncharacterized protein LOC100262...   237   3e-60
ref|XP_003543238.1| PREDICTED: uncharacterized protein LOC100818...   236   5e-60

>ref|XP_002280261.2| PREDICTED: uncharacterized protein LOC100262292 [Vitis vinifera]
          Length = 308

 Score =  266 bits (679), Expect = 8e-69
 Identities = 143/199 (71%), Positives = 164/199 (82%), Gaps = 12/199 (6%)
 Frame = -3

Query: 749 PLTPKPISRSETNTYPTTFIQADTTSFKQVVQMLTGSSETAKQASL-KPTTTSDPSQKSV 573
           P TPKPI+RSE+N YPTTF+QADT+SFKQVVQMLTGSSETAKQAS  KP   SDP  ++ 
Sbjct: 113 PPTPKPITRSESNPYPTTFVQADTSSFKQVVQMLTGSSETAKQASASKPV--SDP--RTH 168

Query: 572 IPPINKNGPKKQGFKLYERRNSMKNLKISPLMPGFIQNSS-FSPRNKPEILSPSILDFPS 396
           IPPI     K+ GFKLYERRNS+KNLK+SPL+PGF+QN+S FSPR KPEILSPS+LDFP+
Sbjct: 169 IPPIKTGAKKQPGFKLYERRNSLKNLKLSPLIPGFVQNNSGFSPR-KPEILSPSMLDFPA 227

Query: 395 LVLSPVTPLIPDPFNRSPPTSSVLA----------AEEKAIAEKGFYLHPSPVSTPRETE 246
           LVLSPVTPLIPDPFNRSP  S   +          AEEKAIAEKGF+LHPSP +TPR++E
Sbjct: 228 LVLSPVTPLIPDPFNRSPMNSCSSSASANANLDSEAEEKAIAEKGFFLHPSPATTPRDSE 287

Query: 245 PRLLPLFPVTSPRIPGSSS 189
           PRLL LFPVTSPR+PGSS+
Sbjct: 288 PRLLSLFPVTSPRVPGSST 306


>emb|CAN78123.1| hypothetical protein VITISV_041548 [Vitis vinifera]
          Length = 235

 Score =  266 bits (679), Expect = 8e-69
 Identities = 143/199 (71%), Positives = 164/199 (82%), Gaps = 12/199 (6%)
 Frame = -3

Query: 749 PLTPKPISRSETNTYPTTFIQADTTSFKQVVQMLTGSSETAKQASL-KPTTTSDPSQKSV 573
           P TPKPI+RSE+N YPTTF+QADT+SFKQVVQMLTGSSETAKQAS  KP   SDP  ++ 
Sbjct: 40  PPTPKPITRSESNPYPTTFVQADTSSFKQVVQMLTGSSETAKQASASKPV--SDP--RTH 95

Query: 572 IPPINKNGPKKQGFKLYERRNSMKNLKISPLMPGFIQNSS-FSPRNKPEILSPSILDFPS 396
           IPPI     K+ GFKLYERRNS+KNLK+SPL+PGF+QN+S FSPR KPEILSPS+LDFP+
Sbjct: 96  IPPIKTGAKKQPGFKLYERRNSLKNLKLSPLIPGFVQNNSGFSPR-KPEILSPSMLDFPA 154

Query: 395 LVLSPVTPLIPDPFNRSPPTSSVLA----------AEEKAIAEKGFYLHPSPVSTPRETE 246
           LVLSPVTPLIPDPFNRSP  S   +          AEEKAIAEKGF+LHPSP +TPR++E
Sbjct: 155 LVLSPVTPLIPDPFNRSPMNSCSSSASANANLDSEAEEKAIAEKGFFLHPSPATTPRDSE 214

Query: 245 PRLLPLFPVTSPRIPGSSS 189
           PRLL LFPVTSPR+PGSS+
Sbjct: 215 PRLLSLFPVTSPRVPGSST 233


>ref|XP_002329129.1| predicted protein [Populus trichocarpa] gi|222869798|gb|EEF06929.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  247 bits (630), Expect = 4e-63
 Identities = 136/203 (66%), Positives = 157/203 (77%), Gaps = 15/203 (7%)
 Frame = -3

Query: 752 PPLTPKPISRSETNTYPTTFIQADTTSFKQVVQMLTGSSETAKQASLK-----PTTTSDP 588
           PPLTP PISRS+TN YPTTF+QADT++FKQVVQMLTGS+ETAKQAS K     PTT +  
Sbjct: 33  PPLTPIPISRSDTNPYPTTFVQADTSTFKQVVQMLTGSTETAKQASSKTTQDPPTTPTQT 92

Query: 587 SQKSVIPPINKNGPKKQ--GFKLYERRN-SMKN-LKISPLMPGFIQN------SSFSPRN 438
           S+   IPPI KN PK+Q   FKLYERRN S KN L I+ L+P F  N      + FSPRN
Sbjct: 93  SRSYNIPPI-KNMPKRQQNSFKLYERRNNSFKNSLMINTLLPSFANNCNSSSVTGFSPRN 151

Query: 437 KPEILSPSILDFPSLVLSPVTPLIPDPFNRSPPTSSVLAAEEKAIAEKGFYLHPSPVSTP 258
           KPEILSPS+LDFP L LSPVTPL  DPFN+S P+    + EE+AIAEKGFYLHPSP+STP
Sbjct: 152 KPEILSPSLLDFPRLTLSPVTPLNEDPFNKSSPSLGNSSEEERAIAEKGFYLHPSPISTP 211

Query: 257 RETEPRLLPLFPVTSPRIPGSSS 189
           R++EP+LL LFPVTSPR+ GSSS
Sbjct: 212 RDSEPQLLSLFPVTSPRVSGSSS 234


>ref|XP_002285047.1| PREDICTED: uncharacterized protein LOC100262369 [Vitis vinifera]
          Length = 210

 Score =  237 bits (605), Expect = 3e-60
 Identities = 139/230 (60%), Positives = 160/230 (69%), Gaps = 8/230 (3%)
 Frame = -3

Query: 854 MENTAKAQEREXXXXXXXXXXXXXXXXXXXXGV-----QPPLTPKPISRSETNTYPTTFI 690
           MENT K Q+RE                            PPLTPKPISRS++N YPTTF+
Sbjct: 1   MENTVKTQDREKTSPITSPNSNGSNCSSSSNSTGLQIQTPPLTPKPISRSDSNPYPTTFV 60

Query: 689 QADTTSFKQVVQMLTGSSETAKQASLKPTTTSDPSQKSV-IPPINKNGPKKQGFKLYERR 513
           QAD  SFKQVVQ LTGSS        KPT   DP  K+  IPPI + G KKQGFKLYERR
Sbjct: 61  QADANSFKQVVQRLTGSS--------KPT--QDPPTKACNIPPI-RTGQKKQGFKLYERR 109

Query: 512 NSMKN-LKISPLMPGFIQNSS-FSPRNKPEILSPSILDFPSLVLSPVTPLIPDPFNRSPP 339
           + +KN L I+PL+ G++QN+S FSPR KPEILSPS+LDFP LVLSPVTPL  DPFN+S  
Sbjct: 110 SQLKNGLMINPLVHGYVQNNSGFSPR-KPEILSPSLLDFPKLVLSPVTPLTEDPFNKS-- 166

Query: 338 TSSVLAAEEKAIAEKGFYLHPSPVSTPRETEPRLLPLFPVTSPRIPGSSS 189
                 +EEKAIAEKGFYLHPSP+STPR++EP+LLPLFPVTSPR+ GSSS
Sbjct: 167 ------SEEKAIAEKGFYLHPSPMSTPRDSEPQLLPLFPVTSPRVSGSSS 210


>ref|XP_003543238.1| PREDICTED: uncharacterized protein LOC100818804 [Glycine max]
          Length = 249

 Score =  236 bits (603), Expect = 5e-60
 Identities = 130/200 (65%), Positives = 151/200 (75%), Gaps = 13/200 (6%)
 Frame = -3

Query: 752 PPLTPKPISRSETNTYPTTFIQADTTSFKQVVQMLTGSSETAKQASLKPTTTSDPSQKSV 573
           PPLTPK I RS++N YPTTF+QADT++FKQVVQMLTGSS+T KQAS  P     PS  S 
Sbjct: 49  PPLTPKTIPRSDSNPYPTTFVQADTSTFKQVVQMLTGSSDTTKQASQDPQPPQPPSSSSS 108

Query: 572 ----IPPINKNGPKKQ--GFKLYERRNSMKN-LKISPLMPGFIQNS-----SFSPRNK-P 432
               IPPI K  PKKQ  GFKLYERRNS+KN L ++ LMP F  N      SFSPRN  P
Sbjct: 109 RNFNIPPI-KAPPKKQQGGFKLYERRNSLKNSLMLNTLMPNFAYNHNNNSPSFSPRNNMP 167

Query: 431 EILSPSILDFPSLVLSPVTPLIPDPFNRSPPTSSVLAAEEKAIAEKGFYLHPSPVSTPRE 252
           EILSPS+LDFPSL LSPVTPL  DPF++S P+    + E+KAIAEKGFYLHPSP++TPR+
Sbjct: 168 EILSPSLLDFPSLALSPVTPLNDDPFDKSSPSLGNSSEEDKAIAEKGFYLHPSPMTTPRD 227

Query: 251 TEPRLLPLFPVTSPRIPGSS 192
           +EP+LLPLFPVTSPR+   S
Sbjct: 228 SEPQLLPLFPVTSPRVSSQS 247


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