BLASTX nr result
ID: Coptis24_contig00005885
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005885
(911 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264531.1| PREDICTED: uncharacterized protein LOC100245... 116 4e-38
ref|XP_004136529.1| PREDICTED: uncharacterized protein LOC101211... 104 3e-36
gb|AAP86780.1| Mal d 1-associated protein [Malus x domestica] 104 4e-35
ref|XP_002323365.1| predicted protein [Populus trichocarpa] gi|2... 97 1e-34
ref|XP_002524090.1| conserved hypothetical protein [Ricinus comm... 93 1e-32
>ref|XP_002264531.1| PREDICTED: uncharacterized protein LOC100245232 [Vitis vinifera]
gi|296089373|emb|CBI39145.3| unnamed protein product
[Vitis vinifera]
Length = 194
Score = 116 bits (291), Expect(2) = 4e-38
Identities = 65/125 (52%), Positives = 80/125 (64%), Gaps = 2/125 (1%)
Frame = +2
Query: 206 EVVKSNTEYTEDDVTNEMAXXXXXXXXXXXEVEPFTFPGLRSDIEAIEKSMFGGLNRFLE 385
EVV+SN EYTEDDVT+ + E F FPGLRSDIEAIE+++FGGLNRF E
Sbjct: 72 EVVQSNEEYTEDDVTDLVVKGSAPLGLP--EQGHFDFPGLRSDIEAIERNLFGGLNRFFE 129
Query: 386 ATEEMRNGFFQAFGAPHIFERE--SQSPFKREVPIEGQSEKKLPCSEQTTDGSGYIDISG 559
A EEM+NGFF FGAP +F+ E S S +R +P EG + K +E SGY D+SG
Sbjct: 130 AAEEMKNGFFSVFGAPPVFDGESSSSSSTRRGIPFEGSNPTKEASAEPFKAESGYGDLSG 189
Query: 560 KVRDV 574
R+V
Sbjct: 190 LAREV 194
Score = 68.6 bits (166), Expect(2) = 4e-38
Identities = 27/46 (58%), Positives = 39/46 (84%)
Frame = +1
Query: 1 DGCSIKKSIRSECTTEEVEPGKFVRKCQKTEEVLRSCVGKPVEVVK 138
D CS ++ ++S+C TEEV+PGKFVRKCQKT+++L+ CVG+ EVV+
Sbjct: 30 DRCSTRRIVKSQCRTEEVKPGKFVRKCQKTQQILKDCVGRATEVVQ 75
>ref|XP_004136529.1| PREDICTED: uncharacterized protein LOC101211397 [Cucumis sativus]
gi|449501138|ref|XP_004161287.1| PREDICTED:
uncharacterized LOC101211397 [Cucumis sativus]
Length = 197
Score = 104 bits (259), Expect(2) = 3e-36
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
Frame = +2
Query: 200 PVEVVKSNTEYTEDDVTNEMAXXXXXXXXXXXEVEPFTFPGLRSDIEAIEKSMFGGLNRF 379
P EV+KSN E TE+DVT++M E P FPGLRSDI+AIE+S+FG + F
Sbjct: 72 PTEVIKSNKEITEEDVTDQMVNRSFSLGSSPSEHRPLDFPGLRSDIDAIEQSLFGSMKGF 131
Query: 380 LEATEEMRNGFFQAFGAPHIFERESQS--PFKREVPIEGQSEKKLPCSEQTTDGSGYIDI 553
EA EE++NGFF + P +F R+S S +R +PIE + + + D SG++D+
Sbjct: 132 FEAAEEIKNGFFGSLRDPPLFNRDSSSSASMRRGIPIEEDHDPVFFYNPKEPD-SGHVDL 190
Query: 554 SGKVRDV 574
SG RDV
Sbjct: 191 SGLARDV 197
Score = 74.7 bits (182), Expect(2) = 3e-36
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = +1
Query: 1 DGCSIKKSIRSECTTEEVEPGKFVRKCQKTEEVLRSCVGKPVEVVK 138
D CS + +RS C TEEVEPGKFVRKC++TEE+LR C+G+P EV+K
Sbjct: 32 DWCSTRNVVRSHCKTEEVEPGKFVRKCERTEEILRDCIGRPTEVIK 77
>gb|AAP86780.1| Mal d 1-associated protein [Malus x domestica]
Length = 190
Score = 104 bits (260), Expect(2) = 4e-35
Identities = 59/128 (46%), Positives = 79/128 (61%), Gaps = 3/128 (2%)
Frame = +2
Query: 200 PVEVVKSNTEYTEDDVTNEMAXXXXXXXXXXXEVEPFTFPGLRSDIEAIEKSMFGGLNRF 379
PVEVV+SN EYTE DVT+E+ FPGLR DIE IE++ GGL+RF
Sbjct: 67 PVEVVQSNKEYTEHDVTDEVLKGSATFGSSQHGA--LDFPGLRGDIEDIERNFMGGLSRF 124
Query: 380 LEATEEMRNGFFQAFGAPHIFERESQSPF---KREVPIEGQSEKKLPCSEQTTDGSGYID 550
EA EE+++GFF AFG +IF+ SP +REVPIEG +++ +D SG++D
Sbjct: 125 FEAAEELKSGFFSAFG--NIFDEGPSSPLPPRRREVPIEGHHQQEAFPKASGSDDSGHVD 182
Query: 551 ISGKVRDV 574
+SG R+V
Sbjct: 183 LSGLAREV 190
Score = 70.5 bits (171), Expect(2) = 4e-35
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +1
Query: 1 DGCSIKKSIRSECTTEEVEPGKFVRKCQKTEEVLRSCVGKPVEVVK 138
D C +K ++ +C TEEVEPGKFVRKC+KTE++LR C G+PVEVV+
Sbjct: 27 DRCLTRKVVKMQCKTEEVEPGKFVRKCEKTEQLLRDCAGRPVEVVQ 72
>ref|XP_002323365.1| predicted protein [Populus trichocarpa] gi|222867995|gb|EEF05126.1|
predicted protein [Populus trichocarpa]
Length = 189
Score = 97.1 bits (240), Expect(2) = 1e-34
Identities = 57/129 (44%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Frame = +2
Query: 200 PVEVVKSNTEYTEDDVTNEMAXXXXXXXXXXXEVEPFTFPGLRSDIEAIEKSMFGGLNRF 379
PVEV+KSN EYTEDDVT ++ E PF F GLR DI+ IE+ GG+NRF
Sbjct: 68 PVEVLKSNKEYTEDDVTEQVVRGLLHPGKF--EDVPFDFHGLRGDIQDIERHFLGGINRF 125
Query: 380 LEATEEMRNGFFQAFGAPHIFERESQSPFKREVPIEGQSEKKLPCSEQT----TDGSGYI 547
EA EEM+N FF FG H S +R +P+EG P +E + SG +
Sbjct: 126 FEAAEEMKNNFFDVFGDFHNGNSSSSPSKRRGIPVEGH-----PLTEASPKPKEPNSGDV 180
Query: 548 DISGKVRDV 574
D+SG RDV
Sbjct: 181 DLSGLARDV 189
Score = 76.3 bits (186), Expect(2) = 1e-34
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +1
Query: 7 CSIKKSIRSECTTEEVEPGKFVRKCQKTEEVLRSCVGKPVEVVK 138
CS + +RS+C TEEVEPGKFVRKC+KTEEVLR C+GKPVEV+K
Sbjct: 30 CSTRTVVRSQCKTEEVEPGKFVRKCEKTEEVLRDCLGKPVEVLK 73
>ref|XP_002524090.1| conserved hypothetical protein [Ricinus communis]
gi|223536658|gb|EEF38300.1| conserved hypothetical
protein [Ricinus communis]
Length = 200
Score = 92.8 bits (229), Expect(2) = 1e-32
Identities = 52/125 (41%), Positives = 72/125 (57%)
Frame = +2
Query: 200 PVEVVKSNTEYTEDDVTNEMAXXXXXXXXXXXEVEPFTFPGLRSDIEAIEKSMFGGLNRF 379
PVEV+KSN EYTEDDVT+ +A + PF FPGLRSDIE +E+ GG+ R
Sbjct: 81 PVEVLKSNKEYTEDDVTDLVAKGSSTLGKF--DNSPFDFPGLRSDIEGLERHFLGGIGRL 138
Query: 380 LEATEEMRNGFFQAFGAPHIFERESQSPFKREVPIEGQSEKKLPCSEQTTDGSGYIDISG 559
EA E+MR+ F FG +++ S R +PIE S ++ + T+ G +D+SG
Sbjct: 139 FEAAEQMRSSIFYTFG--ELYKENSSPSPSRGIPIEDYSRREASPKARETE-PGNVDLSG 195
Query: 560 KVRDV 574
+DV
Sbjct: 196 LAKDV 200
Score = 73.9 bits (180), Expect(2) = 1e-32
Identities = 30/44 (68%), Positives = 40/44 (90%)
Frame = +1
Query: 7 CSIKKSIRSECTTEEVEPGKFVRKCQKTEEVLRSCVGKPVEVVK 138
CS +K ++S+C TEEVEPGKFVRKC+K+EE+LR C+G+PVEV+K
Sbjct: 43 CSTRKVVKSQCKTEEVEPGKFVRKCEKSEEILRECLGEPVEVLK 86