BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005884
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   111   5e-23
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...   111   7e-23
ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   110   1e-22
ref|XP_002460293.1| hypothetical protein SORBIDRAFT_02g026120 [S...   103   2e-20
dbj|BAK00298.1| predicted protein [Hordeum vulgare subsp. vulgare]    102   2e-20

>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score =  111 bits (278), Expect = 5e-23
 Identities = 74/148 (50%), Positives = 89/148 (60%), Gaps = 21/148 (14%)
 Frame = -2

Query: 427 VSEVVSSGNYLSLRRLSVWFTEPTVRMRLTVVRL*K---VVQWLVQFIIMLSK---DSLV 266
           +SE+ SS NYLSLRRLSVWF EP V+MRL  V + K   +    +   I L     D LV
Sbjct: 301 ISEMASSSNYLSLRRLSVWFAEPMVKMRLMAVLVDKCRVLRGGAMAGAIHLHAQHGDPLV 360

Query: 265 QEFMRRLLRRACSPLFEMVRSWVLEGEL----------G*PSMARRL--QTTLLDASIVH 122
            EFMR LL+R CSPLFEMVRSWVLEGEL          G P  A  L  +   L A ++ 
Sbjct: 361 HEFMRNLLQRVCSPLFEMVRSWVLEGELEDLFAEFFVVGQPVKAESLWREGYRLHAGMLP 420

Query: 121 LTVT---CPTVLRTGKSINFLRVCCEDQ 47
             ++      +LRTGKSINFLRVCC+D+
Sbjct: 421 SFISPSLAQRILRTGKSINFLRVCCDDR 448


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222855271|gb|EEE92818.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 860

 Score =  111 bits (277), Expect = 7e-23
 Identities = 75/148 (50%), Positives = 89/148 (60%), Gaps = 21/148 (14%)
 Frame = -2

Query: 427 VSEVVSSGNYLSLRRLSVWFTEPTVRMRLTVVRL*K---VVQWLVQFIIMLSK---DSLV 266
           VS+  SS NYLSLRRLSVWF EPTV+MRL  V + K   +    +   I L     D LV
Sbjct: 306 VSKSTSSSNYLSLRRLSVWFAEPTVKMRLMAVLVDKCRVLRGGAMAGAIHLHAQHGDPLV 365

Query: 265 QEFMRRLLRRACSPLFEMVRSWVLEGEL----------G*PSMARRL--QTTLLDASIVH 122
            EFMR LL+  CSPLFEMVRSWVLEGEL          G P  A  L  +   L A ++ 
Sbjct: 366 HEFMRSLLQHVCSPLFEMVRSWVLEGELEDIFAEFFVVGQPVKAESLWREGYRLHAGMLP 425

Query: 121 LTVTCP---TVLRTGKSINFLRVCCEDQ 47
             ++ P    +LRTGKSINFLRVCC+D+
Sbjct: 426 SFISQPLAQRILRTGKSINFLRVCCDDR 453


>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis
           vinifera]
          Length = 854

 Score =  110 bits (275), Expect = 1e-22
 Identities = 76/150 (50%), Positives = 86/150 (57%), Gaps = 23/150 (15%)
 Frame = -2

Query: 427 VSEVVSSGNYLSLRRLSVWFTEPTVRMRLTVVRL*K---VVQWLVQFIIMLSK---DSLV 266
           VSE  +SG YLSLRRLSVWF EP V+MRL  V + K   +    +   I L     D LV
Sbjct: 300 VSETANSGTYLSLRRLSVWFAEPMVKMRLMAVLVDKCRVLRGGAMAGAIHLHAQHGDPLV 359

Query: 265 QEFMRRLLRRACSPLFEMVRSWVLEGE----------LG*PSMAR-------RLQTTLLD 137
            EFMR+LL R CSPLFEMVRSWVLEGE          LG P  A        RL   +L 
Sbjct: 360 HEFMRQLLCRVCSPLFEMVRSWVLEGELEDIFAEFFVLGQPVKAESLWREGYRLHAGMLP 419

Query: 136 ASIVHLTVTCPTVLRTGKSINFLRVCCEDQ 47
           + I         +LRTGKSINFLRVCCED+
Sbjct: 420 SFISQ--SLAQRILRTGKSINFLRVCCEDR 447


>ref|XP_002460293.1| hypothetical protein SORBIDRAFT_02g026120 [Sorghum bicolor]
           gi|241923670|gb|EER96814.1| hypothetical protein
           SORBIDRAFT_02g026120 [Sorghum bicolor]
          Length = 730

 Score =  103 bits (256), Expect = 2e-20
 Identities = 71/148 (47%), Positives = 79/148 (53%), Gaps = 28/148 (18%)
 Frame = -2

Query: 409 SGNYLSLRRLSVWFTEPTVRMRLTVV-----------RL*KVVQWLVQFIIMLSKDSLVQ 263
           S NYLSLRRL+VW  EP VRMRL  V            +   +    Q       D + Q
Sbjct: 299 SSNYLSLRRLAVWLAEPAVRMRLMAVLVDGCRGLRGGAMAGAIHGHAQH-----GDPMFQ 353

Query: 262 EFMRRLLRRACSPLFEMVRSWVLEGEL----------G*PSMARRL-------QTTLLDA 134
           EFM RLLRR CSPLFEMVRSWVLEGEL          G P  A  L       Q+ +L A
Sbjct: 354 EFMGRLLRRVCSPLFEMVRSWVLEGELEDVFTEFFIVGQPVKAESLWREGYLIQSDMLPA 413

Query: 133 SIVHLTVTCPTVLRTGKSINFLRVCCED 50
            I    V    +LRTGKSINFLRVCC+D
Sbjct: 414 FI--SPVLAQRILRTGKSINFLRVCCDD 439


>dbj|BAK00298.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  102 bits (255), Expect = 2e-20
 Identities = 71/153 (46%), Positives = 82/153 (53%), Gaps = 28/153 (18%)
 Frame = -2

Query: 424 SEVVSSGNYLSLRRLSVWFTEPTVRMRLTVVR-----------L*KVVQWLVQFIIMLSK 278
           S+   SGNYLSLRRL VW  EP V+MRL  V            +   +    Q       
Sbjct: 283 SDSCVSGNYLSLRRLVVWLAEPAVKMRLMAVLVDGCRGLRGGGMAGAIHGHAQH-----G 337

Query: 277 DSLVQEFMRRLLRRACSPLFEMVRSWVLEGEL----------G*PSMARRL-------QT 149
           D +VQ+FM RLLRR CSPLFEMVRSWVLEGEL          G P  A  L       Q+
Sbjct: 338 DPMVQDFMGRLLRRVCSPLFEMVRSWVLEGELEDVFGEFFIVGQPVKAESLWREGYLIQS 397

Query: 148 TLLDASIVHLTVTCPTVLRTGKSINFLRVCCED 50
            +L + I    V    +LRTGKSINFLRVCC+D
Sbjct: 398 DMLPSFI--SPVLAQRILRTGKSINFLRVCCDD 428