BLASTX nr result

ID: Coptis24_contig00005881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005881
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319285.1| predicted protein [Populus trichocarpa] gi|1...   199   1e-48
ref|XP_003634707.1| PREDICTED: DDRGK domain-containing protein 1...   197   6e-48
ref|XP_002522860.1| conserved hypothetical protein [Ricinus comm...   196   1e-47
ref|XP_004151951.1| PREDICTED: DDRGK domain-containing protein 1...   186   1e-44
ref|XP_003543297.1| PREDICTED: DDRGK domain-containing protein 1...   184   4e-44

>ref|XP_002319285.1| predicted protein [Populus trichocarpa] gi|118486501|gb|ABK95090.1|
            unknown [Populus trichocarpa] gi|222857661|gb|EEE95208.1|
            predicted protein [Populus trichocarpa]
          Length = 298

 Score =  199 bits (506), Expect = 1e-48
 Identities = 117/225 (52%), Positives = 132/225 (58%)
 Frame = +2

Query: 518  RGSRLTKQDHYAEMRRRKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISIDAQ 697
            R SRLTKQD YAE+RRRK+                                 GE S+DA+
Sbjct: 117  RDSRLTKQDRYAEIRRRKEEEREAKERMLEEEAKARQAKEEETAALEFDKWKGEFSVDAE 176

Query: 698  GTTENEVXXXXXXXXXXXXXXXXXXXXXXXXXDETQGLLFDFVEYIKKHKCVPLEDLAAE 877
            G+T N++                         D  Q LL DFVEYIKKHKC+PLEDLAAE
Sbjct: 177  GSTGNDLQ------------------------DGNQDLLSDFVEYIKKHKCLPLEDLAAE 212

Query: 878  FKLRTQDCINRITSLESMGSLSGVMDDRGKYIYISQEEMKAVADYIKRHGRVSISHLAXX 1057
            FKLRTQ+CINRITSLESMG LSGVMDDRGKYIYISQEEM+AVADYIKR GRVSISHLA  
Sbjct: 213  FKLRTQECINRITSLESMGRLSGVMDDRGKYIYISQEEMRAVADYIKRQGRVSISHLA-- 270

Query: 1058 XXXXXXXXXXXXXXXXXXSQSNQFIDLEPKVQLMVELDNSEGITV 1192
                              S+SNQFIDLEPK Q + E+ N+E +TV
Sbjct: 271  ------------------SKSNQFIDLEPKAQFVEEISNAEELTV 297


>ref|XP_003634707.1| PREDICTED: DDRGK domain-containing protein 1-like [Vitis vinifera]
            gi|297735965|emb|CBI23939.3| unnamed protein product
            [Vitis vinifera]
          Length = 297

 Score =  197 bits (500), Expect = 6e-48
 Identities = 118/225 (52%), Positives = 129/225 (57%)
 Frame = +2

Query: 518  RGSRLTKQDHYAEMRRRKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISIDAQ 697
            R SRLTKQD YAE RRRKD                                 GE S+DA+
Sbjct: 116  RESRLTKQDRYAETRRRKDEEREAKERQLEEEAKAQKAKEDEAAALEFEKWKGEFSVDAE 175

Query: 698  GTTENEVXXXXXXXXXXXXXXXXXXXXXXXXXDETQGLLFDFVEYIKKHKCVPLEDLAAE 877
            GTTENE+                         D  QGLL DFVEYIKK KCVPLEDLAAE
Sbjct: 176  GTTENEMQ------------------------DGNQGLLVDFVEYIKKQKCVPLEDLAAE 211

Query: 878  FKLRTQDCINRITSLESMGSLSGVMDDRGKYIYISQEEMKAVADYIKRHGRVSISHLAXX 1057
            FKLRTQDCINRITSLE+MG LSGVMDDRGK+IYISQEEM AVADYIKR GRVSISHLA  
Sbjct: 212  FKLRTQDCINRITSLENMGRLSGVMDDRGKFIYISQEEMHAVADYIKRQGRVSISHLA-- 269

Query: 1058 XXXXXXXXXXXXXXXXXXSQSNQFIDLEPKVQLMVELDNSEGITV 1192
                              S+SNQFIDLEPK Q++ ++   E + V
Sbjct: 270  ------------------SKSNQFIDLEPKAQVVDDISGVEEMAV 296


>ref|XP_002522860.1| conserved hypothetical protein [Ricinus communis]
            gi|223537944|gb|EEF39558.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 300

 Score =  196 bits (497), Expect = 1e-47
 Identities = 116/224 (51%), Positives = 129/224 (57%)
 Frame = +2

Query: 518  RGSRLTKQDHYAEMRRRKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISIDAQ 697
            RGSR TKQD YAEMRRRKD                                 GE S+DA+
Sbjct: 119  RGSRQTKQDRYAEMRRRKDEEHEAKERMLEEEAKARKAKEEEAAALEFEKWKGEFSVDAE 178

Query: 698  GTTENEVXXXXXXXXXXXXXXXXXXXXXXXXXDETQGLLFDFVEYIKKHKCVPLEDLAAE 877
            G TE+E                          D  QGLL +FVEYIKK KCVPLEDLAAE
Sbjct: 179  GATESEAQ------------------------DGNQGLLSEFVEYIKKQKCVPLEDLAAE 214

Query: 878  FKLRTQDCINRITSLESMGSLSGVMDDRGKYIYISQEEMKAVADYIKRHGRVSISHLAXX 1057
            F +RTQ+CINRITSLESMG LSGVMDDRGKYIYISQ+EMKAVADYIKR GRVSISHLA  
Sbjct: 215  FTMRTQECINRITSLESMGRLSGVMDDRGKYIYISQDEMKAVADYIKRQGRVSISHLA-- 272

Query: 1058 XXXXXXXXXXXXXXXXXXSQSNQFIDLEPKVQLMVELDNSEGIT 1189
                              S+SNQFIDLEPK Q + E+ N++ +T
Sbjct: 273  ------------------SKSNQFIDLEPKTQFVEEIINTDEMT 298


>ref|XP_004151951.1| PREDICTED: DDRGK domain-containing protein 1-like [Cucumis sativus]
          Length = 297

 Score =  186 bits (472), Expect = 1e-44
 Identities = 113/221 (51%), Positives = 126/221 (57%)
 Frame = +2

Query: 518  RGSRLTKQDHYAEMRRRKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISIDAQ 697
            R SRLTKQD YAE+RR+KD                                 G  S+DA+
Sbjct: 117  RDSRLTKQDRYAEIRRKKDEEREEQERLLEEEAKARKAKEEEAAALEFEKWKGAFSVDAE 176

Query: 698  GTTENEVXXXXXXXXXXXXXXXXXXXXXXXXXDETQGLLFDFVEYIKKHKCVPLEDLAAE 877
            GTTE EV                            Q LL  FVEYIK HKCVPLEDLAAE
Sbjct: 177  GTTEAEVEGG------------------------NQDLLTAFVEYIKSHKCVPLEDLAAE 212

Query: 878  FKLRTQDCINRITSLESMGSLSGVMDDRGKYIYISQEEMKAVADYIKRHGRVSISHLAXX 1057
            FKLRTQ+CINRITSLESMG LSGVMDDRGKYIYIS+EEM+AVAD+IKR GRVSISHLA  
Sbjct: 213  FKLRTQECINRITSLESMGRLSGVMDDRGKYIYISKEEMQAVADFIKRQGRVSISHLA-- 270

Query: 1058 XXXXXXXXXXXXXXXXXXSQSNQFIDLEPKVQLMVELDNSE 1180
                              S+SNQFIDLEPK+QL+ E++  E
Sbjct: 271  ------------------SKSNQFIDLEPKLQLVEEINVEE 293


>ref|XP_003543297.1| PREDICTED: DDRGK domain-containing protein 1-like [Glycine max]
          Length = 299

 Score =  184 bits (467), Expect = 4e-44
 Identities = 113/225 (50%), Positives = 125/225 (55%)
 Frame = +2

Query: 518  RGSRLTKQDHYAEMRRRKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEISIDAQ 697
            R SRL KQD Y+EMRR KD                                 GE S+D +
Sbjct: 119  RESRLAKQDRYSEMRRLKDEEREAQERKLEEEARAQKAKEEEAAALEFEKWKGEFSVDDE 178

Query: 698  GTTENEVXXXXXXXXXXXXXXXXXXXXXXXXXDETQGLLFDFVEYIKKHKCVPLEDLAAE 877
            GT E                              T+ LL +FVEYIKKHKCVPLEDLAAE
Sbjct: 179  GTLEE-------------------------VQGSTEDLLGNFVEYIKKHKCVPLEDLAAE 213

Query: 878  FKLRTQDCINRITSLESMGSLSGVMDDRGKYIYISQEEMKAVADYIKRHGRVSISHLAXX 1057
            FKLRTQ+CINRITSLESMG LSGVMDDRGK+IYISQEEMKAVADYIKR GRVSISHLA  
Sbjct: 214  FKLRTQECINRITSLESMGRLSGVMDDRGKFIYISQEEMKAVADYIKRQGRVSISHLA-- 271

Query: 1058 XXXXXXXXXXXXXXXXXXSQSNQFIDLEPKVQLMVELDNSEGITV 1192
                              S+SNQFIDLEPK Q   +++ +E ITV
Sbjct: 272  ------------------SKSNQFIDLEPKAQYSEDINIAEEITV 298


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