BLASTX nr result

ID: Coptis24_contig00005875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005875
         (1447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268053.1| PREDICTED: uncharacterized protein LOC100246...   147   7e-33
gb|ACU19160.1| unknown [Glycine max]                                  134   8e-29
ref|XP_003521509.1| PREDICTED: uncharacterized protein LOC100804...   132   3e-28
ref|XP_003554502.1| PREDICTED: uncharacterized protein LOC100785...   128   3e-27
ref|XP_002524113.1| conserved hypothetical protein [Ricinus comm...   118   3e-24

>ref|XP_002268053.1| PREDICTED: uncharacterized protein LOC100246168 [Vitis vinifera]
          Length = 265

 Score =  147 bits (371), Expect = 7e-33
 Identities = 108/284 (38%), Positives = 151/284 (53%), Gaps = 10/284 (3%)
 Frame = -1

Query: 1342 MVKRKSGQTAPLATNKEKVHNDHVESSN--VGIEDLHEDDWVIVKKQKXXXXXXXXXXXX 1169
            MVK K  Q A L  NK    +    S N    ++ L ED WVIVKKQ+            
Sbjct: 1    MVKPKKRQLAALPANKNGAPSGLSGSVNSKTKVDLLGEDSWVIVKKQRVTILVPPLPVAK 60

Query: 1168 XXXLKGLRSNKVSAKFRKSKRSRAQVLNEVNPRTRSGKLKNSFDERSWATVPNRRKNI-- 995
               +     ++  A  +++   R QV +E  P      L++S  ER  +T    +++I  
Sbjct: 61   ESQMPNPGLSQPQAIPQETNTKRWQVSSEACP------LRDSVVEREKSTSLGSQRDIQV 114

Query: 994  -----TRPTLKSALEGPERVCGKSTAHLSSSKFVNDHNMYGGLGSSKPLMVYGGLKAAKR 830
                 +   + ++++ P    G+ + +              G+G+ KP  + G   AAK 
Sbjct: 115  TQKIPSAQPVSTSVKPPRLYFGRGSDNTE------------GVGTFKPQRMLGPNSAAK- 161

Query: 829  QNTCHQGSTVLLRPISCFSVTGVQ-NRMIRASNLERKLEKVGGLTRWLMSLGLGQFVMMF 653
                 +  T+L  PI+ F + GV  N+ +RA NLERKL++ GGL+RWL  LGLGQFV +F
Sbjct: 162  ---AIKRPTLLHEPIN-FPIGGVLLNQRMRALNLERKLQRAGGLSRWLALLGLGQFVKIF 217

Query: 652  RRANVTKFQLSNLTMEKLKDMGANAVGPRRKLIHAIDCLSHPYC 521
            +R +V KFQL NLTM+KLKDMGA+AVGPRRKLIHAIDCL  PYC
Sbjct: 218  QRRSVDKFQLINLTMKKLKDMGADAVGPRRKLIHAIDCLCQPYC 261


>gb|ACU19160.1| unknown [Glycine max]
          Length = 261

 Score =  134 bits (336), Expect = 8e-29
 Identities = 96/278 (34%), Positives = 136/278 (48%)
 Frame = -1

Query: 1342 MVKRKSGQTAPLATNKEKVHNDHVESSNVGIEDLHEDDWVIVKKQKXXXXXXXXXXXXXX 1163
            MVK K  +T  +   K    +  + +S  G     + DW+IVKKQ+              
Sbjct: 1    MVKTKQKRTGKVPGKKSGTSSHCLVNSGNGDNQHEDSDWIIVKKQRVTILVPAAPLNERS 60

Query: 1162 XLKGLRSNKVSAKFRKSKRSRAQVLNEVNPRTRSGKLKNSFDERSWATVPNRRKNITRPT 983
                   N +     +   +  Q+  E +    SG      +E   AT+  R++      
Sbjct: 61   LTANQGPNHMHLMPPEIASNHVQLPMETSTMHPSG------NEHEKATLALRKETRAERR 114

Query: 982  LKSALEGPERVCGKSTAHLSSSKFVNDHNMYGGLGSSKPLMVYGGLKAAKRQNTCHQGST 803
                L  P  V   S   +  S+  N H     L S K L ++   K  K+  T      
Sbjct: 115  TPPTLPKPTVVNPPSLDEIIESE--NPHQT-NSLKSHKLLGIFDTSKVIKQPRT------ 165

Query: 802  VLLRPISCFSVTGVQNRMIRASNLERKLEKVGGLTRWLMSLGLGQFVMMFRRANVTKFQL 623
             LL P    ++  + N+ +RASNLERKLE+ GGL++WL SLGL QFV +F+  +++K+QL
Sbjct: 166  -LLAPRRSSNLETL-NKSLRASNLERKLERAGGLSKWLTSLGLAQFVRIFQGNSLSKYQL 223

Query: 622  SNLTMEKLKDMGANAVGPRRKLIHAIDCLSHPYCLNKL 509
             NLTM+KLKDMGA+AVGPRRKLIHA+DC+  PYC   L
Sbjct: 224  VNLTMKKLKDMGASAVGPRRKLIHAMDCVCQPYCFEAL 261


>ref|XP_003521509.1| PREDICTED: uncharacterized protein LOC100804141 [Glycine max]
          Length = 261

 Score =  132 bits (331), Expect = 3e-28
 Identities = 96/278 (34%), Positives = 135/278 (48%)
 Frame = -1

Query: 1342 MVKRKSGQTAPLATNKEKVHNDHVESSNVGIEDLHEDDWVIVKKQKXXXXXXXXXXXXXX 1163
            MVK K  +T  +   K    +  + +S  G     + DW+IVKKQ+              
Sbjct: 1    MVKTKQKRTGKVPGKKSGTSSHCLVNSGNGDNQHEDSDWIIVKKQRVTILVPAAPLNERS 60

Query: 1162 XLKGLRSNKVSAKFRKSKRSRAQVLNEVNPRTRSGKLKNSFDERSWATVPNRRKNITRPT 983
                   N +     +   +  Q+  E +    SG      +E   AT+  R++      
Sbjct: 61   LTANQGPNHMHLMPPEIASNHVQLPMETSTMHPSG------NEHEKATLALRKETRAERR 114

Query: 982  LKSALEGPERVCGKSTAHLSSSKFVNDHNMYGGLGSSKPLMVYGGLKAAKRQNTCHQGST 803
                L  P  V   S   +  S+  N H     L S K L +    K  K+  T      
Sbjct: 115  APPTLPKPTVVNPPSLDEIIESE--NPHQT-NSLKSHKLLGISDTSKVIKQPRT------ 165

Query: 802  VLLRPISCFSVTGVQNRMIRASNLERKLEKVGGLTRWLMSLGLGQFVMMFRRANVTKFQL 623
             LL P    ++  + N+ +RASNLERKLE+ GGL++WL SLGL QFV +F+  +++K+QL
Sbjct: 166  -LLAPRRSSNLETL-NKSLRASNLERKLERAGGLSKWLTSLGLAQFVRIFQGNSLSKYQL 223

Query: 622  SNLTMEKLKDMGANAVGPRRKLIHAIDCLSHPYCLNKL 509
             NLTM+KLKDMGA+AVGPRRKLIHA+DC+  PYC   L
Sbjct: 224  VNLTMKKLKDMGASAVGPRRKLIHAMDCVCQPYCFEAL 261


>ref|XP_003554502.1| PREDICTED: uncharacterized protein LOC100785969 [Glycine max]
          Length = 262

 Score =  128 bits (322), Expect = 3e-27
 Identities = 97/284 (34%), Positives = 141/284 (49%), Gaps = 6/284 (2%)
 Frame = -1

Query: 1342 MVKRKSGQTAPLATNKEKVHNDHVESSNVGIEDLHEDDWVIVKKQKXXXXXXXXXXXXXX 1163
            MVK K  +T  +   K    +  +  S  G     + DW+IVKKQ+              
Sbjct: 1    MVKTKQKRTGEVPGKKSGTSSHCLVDSGDGDNQHEDSDWIIVKKQRVTILVPAAPLNDRS 60

Query: 1162 XLKGLRSNKVSAKFRKSKRSRAQVLNEVNPRTRSGKL--KNSFDERSWATVPNRRKNITR 989
             +     N +     +   +  Q+  + +    SGK   K +       T   R+  +T 
Sbjct: 61   LIANQGPNHMHLMPPEIASNHVQLPMQTSTVHPSGKEHEKATLLAVQKETHAERKALLTL 120

Query: 988  PTLKSALEGP----ERVCGKSTAHLSSSKFVNDHNMYGGLGSSKPLMVYGGLKAAKRQNT 821
            P  KS +  P    +R+  ++   ++S K    H + G   +SK +         K+  T
Sbjct: 121  P--KSTVVNPPSLDQRIESENPQAMNSLKL---HKLLGVSDASKVI---------KQPRT 166

Query: 820  CHQGSTVLLRPISCFSVTGVQNRMIRASNLERKLEKVGGLTRWLMSLGLGQFVMMFRRAN 641
                   LL P   F+   + N+ +RASNLERKLE+ GGL+ WL SLGLGQFV +F+  +
Sbjct: 167  -------LLAPRRSFNQETL-NKNLRASNLERKLERAGGLSNWLTSLGLGQFVRIFQGNS 218

Query: 640  VTKFQLSNLTMEKLKDMGANAVGPRRKLIHAIDCLSHPYCLNKL 509
            ++K+QL NLTM+KLKDMGA+AVGPRRKLIHA+DC+  PYC   L
Sbjct: 219  LSKYQLVNLTMKKLKDMGASAVGPRRKLIHAMDCVCQPYCFEAL 262


>ref|XP_002524113.1| conserved hypothetical protein [Ricinus communis]
            gi|223536681|gb|EEF38323.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 253

 Score =  118 bits (296), Expect = 3e-24
 Identities = 93/269 (34%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
 Frame = -1

Query: 1237 EDDWVIVKKQKXXXXXXXXXXXXXXXLKGLRSNKVSAKFRKSKRSRAQVLNEVNPRTRSG 1058
            ED WVIVKKQ+                       V+       R++   + +  PR    
Sbjct: 28   EDSWVIVKKQR-----------------------VTILIPPQPRAQGSTVPKPGPRKLEA 64

Query: 1057 KLKNSFDERSWATV--PNR------RKNITRPTLKSALEGPERVCGKSTAHLSSSKFV-- 908
                + + +S   V  PNR      +  +T  T    +E   R+    T HLS+S  +  
Sbjct: 65   MPIEAVNNKSSKPVETPNRMPSVEEQAKVTSVTANRCIEVSTRI---PTQHLSASHKLPR 121

Query: 907  ----------------NDHNMYGGLGSSK----PLMVYGGLKAAKRQNTCHQGSTVLLRP 788
                              HN+ G    SK    P ++ G       Q     GS +L   
Sbjct: 122  LNVEMEAENPDRFHTFKSHNVLGVSNVSKTIKQPRLLLG-------QRHFLDGSILL--- 171

Query: 787  ISCFSVTGVQNRMIRASNLERKLEKVGGLTRWLMSLGLGQFVMMFRRANVTKFQLSNLTM 608
                      N+ +RAS LE+KL+K GGL+RWL S+GLGQFV +F+  N++KFQL NLTM
Sbjct: 172  ----------NQRLRASLLEKKLQKAGGLSRWLASIGLGQFVKIFQ-GNISKFQLVNLTM 220

Query: 607  EKLKDMGANAVGPRRKLIHAIDCLSHPYC 521
            +KLKDMGA+AVGPRRKL+HAIDC+  PYC
Sbjct: 221  KKLKDMGADAVGPRRKLMHAIDCICQPYC 249


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