BLASTX nr result

ID: Coptis24_contig00005871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005871
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274987.1| PREDICTED: CDK-activating kinase assembly fa...   164   2e-38
ref|NP_001238600.1| uncharacterized protein LOC100305654 [Glycin...   153   6e-35
ref|XP_004146669.1| PREDICTED: uncharacterized protein LOC101207...   147   2e-33
ref|XP_003618273.1| CDK-activating kinase assembly factor MAT1 [...   147   2e-33
gb|AFK34621.1| unknown [Medicago truncatula]                          145   9e-33

>ref|XP_002274987.1| PREDICTED: CDK-activating kinase assembly factor MAT1 [Vitis
           vinifera] gi|297743691|emb|CBI36574.3| unnamed protein
           product [Vitis vinifera]
          Length = 189

 Score =  164 bits (415), Expect = 2e-38
 Identities = 98/193 (50%), Positives = 112/193 (58%), Gaps = 4/193 (2%)
 Frame = -1

Query: 858 PSLRDYNDYLEEVEDLTFNLIEGINVPAIETRIAKYQEENGDQIMNARARRXXXXXXXXX 679
           PSLR+YNDYLEEVED+T NLIEGI+VPAIE +IAKYQEEN +QIM  RAR+         
Sbjct: 31  PSLREYNDYLEEVEDMTTNLIEGIDVPAIEVKIAKYQEENAEQIMINRARKAEELAAAMA 90

Query: 678 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKGGIAHTDXXXXXXXXXXXXXXXXXQMQY 499
                                         SKG    TD                    Y
Sbjct: 91  A-----------------------------SKGQPVQTDTDGATSQSSQAGIGAGAPGHY 121

Query: 498 APAMPGIAFGQPRPTGMAPQPVPVGSGHDMHGFATDDEEMMELRA----RAGGWSLELSK 331
           AP +PG   GQPRPTGMAPQP+PVG G +  G+A DDEEMM+LRA    +AGGWS+ELSK
Sbjct: 122 APTVPG---GQPRPTGMAPQPIPVGVGPE--GYAADDEEMMKLRAERGGKAGGWSIELSK 176

Query: 330 RRAIEEAFGSMWI 292
           RRAIEEAFGS+WI
Sbjct: 177 RRAIEEAFGSIWI 189


>ref|NP_001238600.1| uncharacterized protein LOC100305654 [Glycine max]
           gi|255626207|gb|ACU13448.1| unknown [Glycine max]
          Length = 188

 Score =  153 bits (386), Expect = 6e-35
 Identities = 93/190 (48%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
 Frame = -1

Query: 858 PSLRDYNDYLEEVEDLTFNLIEGINVPAIETRIAKYQEENGDQIMNARARRXXXXXXXXX 679
           PSLR+YNDYLEEVED+TFNLIEGI+V  IE +IAKYQEEN +QIM  RAR+         
Sbjct: 31  PSLREYNDYLEEVEDMTFNLIEGIDVSDIEAKIAKYQEENAEQIMINRARKAEELAAAMA 90

Query: 678 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKGGIAHTDXXXXXXXXXXXXXXXXXQMQY 499
                                         SKG  A TD                 Q QY
Sbjct: 91  A-----------------------------SKGQPAQTDDDSATNQNSQAGFGAVPQGQY 121

Query: 498 APAMPGIAFGQPRPTGMAPQPVPVGSGHDMHGFATDDEEMMELRA-RAGGWSLELSKRRA 322
           AP   G   GQPRPTGMAPQP+P+G G DM GFA DDEE   LR  RAGGWS ++S++RA
Sbjct: 122 APTFAG---GQPRPTGMAPQPLPLGGG-DMPGFAGDDEETKRLRTERAGGWSGDISRKRA 177

Query: 321 IEEAFGSMWI 292
           +EEAFGS+W+
Sbjct: 178 LEEAFGSIWV 187


>ref|XP_004146669.1| PREDICTED: uncharacterized protein LOC101207027 [Cucumis sativus]
           gi|449503153|ref|XP_004161860.1| PREDICTED:
           uncharacterized LOC101207027 [Cucumis sativus]
          Length = 189

 Score =  147 bits (372), Expect = 2e-33
 Identities = 91/192 (47%), Positives = 107/192 (55%), Gaps = 4/192 (2%)
 Frame = -1

Query: 855 SLRDYNDYLEEVEDLTFNLIEGINVPAIETRIAKYQEENGDQIMNARARRXXXXXXXXXX 676
           SLR+YNDYLEEVED+TFNLIEGI+V AIE +IA+YQEEN +QIM  RAR+          
Sbjct: 32  SLREYNDYLEEVEDMTFNLIEGIDVQAIEAKIARYQEENAEQIMINRARKAEEYAAALAA 91

Query: 675 XXXXXXXXXXXXXXXXXXXXXXXXXXXXASKGGIAHTDXXXXXXXXXXXXXXXXXQMQYA 496
                                        SKG  A  D                 Q QYA
Sbjct: 92  -----------------------------SKGIPAQADNDGAADQSFQAGLSTGTQGQYA 122

Query: 495 PAMPGIAFGQPRPTGMAPQPVPVGSGHDMHGFATDDEEMMELRA----RAGGWSLELSKR 328
           P   G   GQPRPTG   QPVP+G+G DM G+  DDEEM+ LRA    RAGGWS+E S++
Sbjct: 123 PTFAG---GQPRPTG---QPVPLGAGPDMQGYGLDDEEMLRLRAERGGRAGGWSVEFSRK 176

Query: 327 RAIEEAFGSMWI 292
           RA+EEAFGS+WI
Sbjct: 177 RALEEAFGSIWI 188


>ref|XP_003618273.1| CDK-activating kinase assembly factor MAT1 [Medicago truncatula]
           gi|355493288|gb|AES74491.1| CDK-activating kinase
           assembly factor MAT1 [Medicago truncatula]
          Length = 185

 Score =  147 bits (372), Expect = 2e-33
 Identities = 87/189 (46%), Positives = 107/189 (56%)
 Frame = -1

Query: 858 PSLRDYNDYLEEVEDLTFNLIEGINVPAIETRIAKYQEENGDQIMNARARRXXXXXXXXX 679
           PSL++YNDYLEEVED+TFNLIEGI+V AIE RIAKYQEEN +QIM  RAR+         
Sbjct: 31  PSLKEYNDYLEEVEDMTFNLIEGIDVAAIEARIAKYQEENSEQIMINRARKAEELAAAMA 90

Query: 678 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKGGIAHTDXXXXXXXXXXXXXXXXXQMQY 499
                                         SKG  A TD                   QY
Sbjct: 91  T-----------------------------SKGQPAQTDNDDANPNSQAGFGAVPQG-QY 120

Query: 498 APAMPGIAFGQPRPTGMAPQPVPVGSGHDMHGFATDDEEMMELRARAGGWSLELSKRRAI 319
           AP + G   GQPRPTGM PQP+P+G G    G+  ++EE +  +ARAGGWS+E+S++RA+
Sbjct: 121 APTIAG---GQPRPTGMGPQPLPLGGGDA--GYVVENEETLRRQARAGGWSIEISRKRAL 175

Query: 318 EEAFGSMWI 292
           EEAFGS+WI
Sbjct: 176 EEAFGSIWI 184


>gb|AFK34621.1| unknown [Medicago truncatula]
          Length = 185

 Score =  145 bits (367), Expect = 9e-33
 Identities = 86/189 (45%), Positives = 106/189 (56%)
 Frame = -1

Query: 858 PSLRDYNDYLEEVEDLTFNLIEGINVPAIETRIAKYQEENGDQIMNARARRXXXXXXXXX 679
           P L++YNDYLEEVED+TFNLIEGI+V AIE RIAKYQEEN +QIM  RAR+         
Sbjct: 31  PPLKEYNDYLEEVEDMTFNLIEGIDVAAIEARIAKYQEENSEQIMINRARKAEELAAAMA 90

Query: 678 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKGGIAHTDXXXXXXXXXXXXXXXXXQMQY 499
                                         SKG  A TD                   QY
Sbjct: 91  T-----------------------------SKGQPAQTDNDDANPNSQAGFGAVPQG-QY 120

Query: 498 APAMPGIAFGQPRPTGMAPQPVPVGSGHDMHGFATDDEEMMELRARAGGWSLELSKRRAI 319
           AP + G   GQPRPTGM PQP+P+G G    G+  ++EE +  +ARAGGWS+E+S++RA+
Sbjct: 121 APTIAG---GQPRPTGMGPQPLPLGGGDA--GYVVENEETLRRQARAGGWSIEISRKRAL 175

Query: 318 EEAFGSMWI 292
           EEAFGS+WI
Sbjct: 176 EEAFGSIWI 184


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