BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005868
         (1367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containi...   532   e-149
emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]   525   e-147
gb|AAT66765.1| Putative selenium-binding protein, related [Solan...   506   e-141
ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containi...   505   e-140
ref|XP_003524191.1| PREDICTED: pentatricopeptide repeat-containi...   503   e-140

>ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580
            [Vitis vinifera]
          Length = 807

 Score =  532 bits (1371), Expect = e-149
 Identities = 260/434 (59%), Positives = 332/434 (76%), Gaps = 4/434 (0%)
 Frame = -2

Query: 1345 FNMNTNGLPRRVGDSSTPMSFGLNSRSVEAAEKIQYVGTMEELDGFCKENKVKDAVEVLT 1166
            +  N+N     +  S    ++  +  S+EAAE  QY GT+EE+D FCK+ KVK+A+EVL 
Sbjct: 374  YQTNSNEFQNSMVGSPKSSNYKPDGESLEAAESSQYSGTLEEVDDFCKDGKVKEAIEVLG 433

Query: 1165 VLENNGIIVDLPRYLLLMQICGEIRVLQYAKTVHDHLIRSLGHVNLSVHNKVLEMYSSCG 986
            +LE     VDLPRYL LM+ CGE + LQ AK VH+ LI+S+  + +S +N++LEMYS CG
Sbjct: 434  LLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHESLIKSVSPLKVSTYNRILEMYSKCG 493

Query: 985  SISDAFDVFEKMNERNLTSWDTMITGLAKNGCGEDAIDLFTRFKGMGLTPDGQMFVGVFL 806
            S+ DA+ VF+KM ERNLTSWDTMIT  AKN  GE+AIDLF +FK  GL PDGQMF+GVF+
Sbjct: 494  SMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEEAIDLFIQFKESGLKPDGQMFIGVFM 553

Query: 805  ACGVLFDIDEGMLHFESMSKVYGIVLTMEHYLSVVNMLGSTGCLEEAMEFIEKMPFDPNV 626
            AC VL D+ EGMLHF SMSK YGIV +M+HY S+V+MLG++G L+EA+EF+EKMP +P+V
Sbjct: 554  ACSVLGDVIEGMLHFNSMSKDYGIVPSMKHYASMVDMLGNSGYLDEALEFVEKMPLEPSV 613

Query: 625  EVWESLMNLCIIHGNIELGDHCAKLVNFLDPSRLTDLSKKGLLPA-XXXXXXXXXXXXKR 449
            +VWE+LMN+C + GN+E+GD CA+LV  L+PSRLT+ SK GL+P                
Sbjct: 614  DVWETLMNICRVQGNMEIGDRCAELVEHLEPSRLTEQSKAGLVPVKASDLEKEKEKKKLA 673

Query: 448  SDDLRDMRSKVQEYRAGDTCHPEN---YSLLKGMSAQMKEAGYVPELRQVLHDVDDESKE 278
            S +L ++RS+V EYRAGDT HPEN   Y+ L+G+ AQMKEAGYVPE R VLHD+D E KE
Sbjct: 674  SQNLLEVRSRVHEYRAGDTSHPENDKIYAKLRGLKAQMKEAGYVPETRFVLHDIDQEGKE 733

Query: 277  EALLSHSERLAVAHGLVNSAARMPIRVIKNLRVCVDCHKALKIMAKIVGRQFIMRDTKRF 98
            EALL+HSERLAVA+GL++S AR PIRVIKNLRVC DCH ALKI++K+VGR+ I+RD KRF
Sbjct: 734  EALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRF 793

Query: 97   HHFQDGLCSCKDFW 56
            HHF+DGLCSC+D+W
Sbjct: 794  HHFKDGLCSCRDYW 807


>emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
          Length = 1148

 Score =  525 bits (1353), Expect = e-147
 Identities = 258/433 (59%), Positives = 330/433 (76%), Gaps = 4/433 (0%)
 Frame = -2

Query: 1345 FNMNTNGLPRRVGDSSTPMSFGLNSRSVEAAEKIQYVGTMEELDGFCKENKVKDAVEVLT 1166
            +  N+N     +  S    ++  +  S+EAAE  QY GT+EE+D FCK+ KVK+A+EVL 
Sbjct: 374  YQTNSNEFQNSMVGSPKSSNYKPDGESLEAAESSQYSGTLEEVDDFCKDGKVKEAIEVLG 433

Query: 1165 VLENNGIIVDLPRYLLLMQICGEIRVLQYAKTVHDHLIRSLGHVNLSVHNKVLEMYSSCG 986
            +LE     VDLPRYL LM+ CGE + LQ AK VH+ LI+S+  + +S +N++LEMYS CG
Sbjct: 434  LLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHESLIKSVSPLKVSTYNRILEMYSKCG 493

Query: 985  SISDAFDVFEKMNERNLTSWDTMITGLAKNGCGEDAIDLFTRFKGMGLTPDGQMFVGVFL 806
            S+ DA+ VF+KM ERNLTSWDTMIT  AKN  GE+AIDLF +FK  GL PD QMF+GVF+
Sbjct: 494  SMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEEAIDLFIQFKESGLKPDXQMFIGVFM 553

Query: 805  ACGVLFDIDEGMLHFESMSKVYGIVLTMEHYLSVVNMLGSTGCLEEAMEFIEKMPFDPNV 626
            AC VL D+ EGMLHF SMSK YGIV +M+HY S+V+MLG++G L+EA+EF+EKMP +P+V
Sbjct: 554  ACSVLGDVIEGMLHFNSMSKDYGIVPSMKHYASMVDMLGNSGYLDEALEFVEKMPLEPSV 613

Query: 625  EVWESLMNLCIIHGNIELGDHCAKLVNFLDPSRLTDLSKKGLLPA-XXXXXXXXXXXXKR 449
            +VWE+LMN+C + GN+E+GD CA+LV  L+PSRLT+ SK GL+P                
Sbjct: 614  DVWETLMNICRVQGNMEIGDRCAELVEHLEPSRLTEQSKAGLVPVKASDLEKEKEKKKLA 673

Query: 448  SDDLRDMRSKVQEYRAGDTCHPEN---YSLLKGMSAQMKEAGYVPELRQVLHDVDDESKE 278
            S +L ++RS+V EYRAGDT HPEN   Y+ L+G+ AQMKEAGYVPE R VLHD+D E KE
Sbjct: 674  SQNLLEVRSRVHEYRAGDTSHPENDKIYAKLRGLKAQMKEAGYVPETRFVLHDIDQEGKE 733

Query: 277  EALLSHSERLAVAHGLVNSAARMPIRVIKNLRVCVDCHKALKIMAKIVGRQFIMRDTKRF 98
            EALL+HSERLAVA+GL++S AR PIRVIKNLRVC DCH ALKI++K+VGR+ I+RD KRF
Sbjct: 734  EALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRF 793

Query: 97   HHFQDGLCSCKDF 59
            HHF+DGLCSC+D+
Sbjct: 794  HHFKDGLCSCRDY 806


>gb|AAT66765.1| Putative selenium-binding protein, related [Solanum demissum]
          Length = 741

 Score =  506 bits (1303), Expect = e-141
 Identities = 245/419 (58%), Positives = 316/419 (75%), Gaps = 3/419 (0%)
 Frame = -2

Query: 1303 SSTPMSFGLNSRSVEAAEKIQYVGTMEELDGFCKENKVKDAVEVLTVLENNGIIVDLPRY 1124
            SSTP+      +S+++ +     G+++ELD  CKE KVK+AVEVL +L+   + VDL RY
Sbjct: 328  SSTPVE-----QSIDSDDSSSKKGSVDELDDLCKEGKVKEAVEVLQLLDQQHVTVDLSRY 382

Query: 1123 LLLMQICGEIRVLQYAKTVHDHLIRSLGHVNLSVHNKVLEMYSSCGSISDAFDVFEKMNE 944
            ++LM +C E + L+ AK++H+HL+RS  H+++ ++NK+LEMY  CGS+ DAF VF KM +
Sbjct: 383  IMLMDVCSEDKSLEDAKSIHEHLVRSHPHLDIKMYNKILEMYGKCGSMKDAFLVFRKMPQ 442

Query: 943  RNLTSWDTMITGLAKNGCGEDAIDLFTRFKGMGLTPDGQMFVGVFLACGVLFDIDEGMLH 764
            RNLTSWDTMIT L KNG GEDAI+LF  FK  G+ PDGQMF+GVF AC V+ DI EGMLH
Sbjct: 443  RNLTSWDTMITWLGKNGLGEDAIELFGEFKETGMKPDGQMFLGVFHACSVVGDIVEGMLH 502

Query: 763  FESMSKVYGIVLTMEHYLSVVNMLGSTGCLEEAMEFIEKMPFDPNVEVWESLMNLCIIHG 584
            FESMSK Y I L+ME Y+ VV+MLGSTG L+EAMEFIE+MP +P++EVWE++MNLC IHG
Sbjct: 503  FESMSKDYDIDLSMEQYVGVVDMLGSTGYLDEAMEFIERMPIEPSIEVWETMMNLCRIHG 562

Query: 583  NIELGDHCAKLVNFLDPSRLTDLSKKGLLPAXXXXXXXXXXXXKRSDDLRDMRSKVQEYR 404
            N+ELGD CA++V  LDPSRL + SK G L              + +  L + RSKV EYR
Sbjct: 563  NLELGDRCAEIVELLDPSRLDEQSKAGFLAVKASDIAKEKEKKRSAQSLLEARSKVHEYR 622

Query: 403  AGDTCHPEN---YSLLKGMSAQMKEAGYVPELRQVLHDVDDESKEEALLSHSERLAVAHG 233
            AGD  HP++   Y+LL+G+   MKE GY+PE + VLHDVD E+KE+AL++HSERLA A G
Sbjct: 623  AGDRSHPDHEKIYALLRGLKQLMKEDGYIPETKFVLHDVDQETKEDALMAHSERLAFAQG 682

Query: 232  LVNSAARMPIRVIKNLRVCVDCHKALKIMAKIVGRQFIMRDTKRFHHFQDGLCSCKDFW 56
            L+NS+AR PIR+IKNLRVC DCH ALKI +K+VGR+ IMRD KRFHH +DGLCSC+D+W
Sbjct: 683  LMNSSARSPIRIIKNLRVCGDCHNALKIASKLVGREIIMRDAKRFHHLKDGLCSCRDYW 741


>ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580-like
            [Glycine max]
          Length = 664

 Score =  505 bits (1300), Expect = e-140
 Identities = 252/436 (57%), Positives = 319/436 (73%), Gaps = 4/436 (0%)
 Frame = -2

Query: 1351 GGFNMNTNGLPRRVGDSSTPMSFGLNSRSVEAAEKIQYVGTMEELDGFCKENKVKDAVEV 1172
            G +  N N   R V  S    +   +  S +A+    Y GT+EELD FC E  VK+AVEV
Sbjct: 229  GQYLPNLNTAQRSVVGSHLSSNANPDGESAKASNDSPYRGTLEELDNFCIEGNVKEAVEV 288

Query: 1171 LTVLENNGIIVDLPRYLLLMQICGEIRVLQYAKTVHDHLIRSLGHVNLSVHNKVLEMYSS 992
            L +LE   I VDLPRYL LM  CGE + L+ AK VH H ++ L  + +S +N++LEMY  
Sbjct: 289  LELLEKLDIPVDLPRYLQLMHQCGENKSLEEAKNVHRHALQHLSPLQVSTYNRILEMYLE 348

Query: 991  CGSISDAFDVFEKMNERNLTSWDTMITGLAKNGCGEDAIDLFTRFKGMGLTPDGQMFVGV 812
            CGS+ DA ++F  M ERNLT+WDTMIT LAKNG  ED+IDLFT+FK +GL PDGQMF+GV
Sbjct: 349  CGSVDDALNIFNNMPERNLTTWDTMITQLAKNGFAEDSIDLFTQFKNLGLKPDGQMFIGV 408

Query: 811  FLACGVLFDIDEGMLHFESMSKVYGIVLTMEHYLSVVNMLGSTGCLEEAMEFIEKMPFDP 632
              ACG+L DIDEGM HFESM+K YGIV +M H++SVV+M+GS G L+EA EFIEKMP  P
Sbjct: 409  LFACGMLGDIDEGMQHFESMNKDYGIVPSMTHFVSVVDMIGSIGHLDEAFEFIEKMPMKP 468

Query: 631  NVEVWESLMNLCIIHGNIELGDHCAKLVNFLDPSRLTDLSKKGLLPAXXXXXXXXXXXXK 452
            + ++WE+LMNLC +HGN  LGD CA+LV  LD S L + SK GL+P              
Sbjct: 469  SADIWETLMNLCRVHGNTGLGDCCAELVEQLDSSCLNEQSKAGLVPVKASDLTKEKEKRT 528

Query: 451  RSD-DLRDMRSKVQEYRAGDTCHPEN---YSLLKGMSAQMKEAGYVPELRQVLHDVDDES 284
             ++ +L ++RS+V+EYRAGDT HPE+   Y+LL+G+ +QMKEAGYVPE + VLHD+D E 
Sbjct: 529  LTNKNLLEVRSRVREYRAGDTFHPESDKIYALLRGLKSQMKEAGYVPETKFVLHDIDQEG 588

Query: 283  KEEALLSHSERLAVAHGLVNSAARMPIRVIKNLRVCVDCHKALKIMAKIVGRQFIMRDTK 104
            KEEALL+HSERLA+A+GL+NS AR P+RVIKNLRVC DCH ALKI++K+VGR+ I+RD K
Sbjct: 589  KEEALLAHSERLAIAYGLLNSPARAPMRVIKNLRVCGDCHTALKIISKLVGRELIIRDAK 648

Query: 103  RFHHFQDGLCSCKDFW 56
            RFHHF DGLCSC+D+W
Sbjct: 649  RFHHFNDGLCSCRDYW 664


>ref|XP_003524191.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580-like
            [Glycine max]
          Length = 664

 Score =  503 bits (1295), Expect = e-140
 Identities = 258/449 (57%), Positives = 318/449 (70%), Gaps = 13/449 (2%)
 Frame = -2

Query: 1363 YQGSGGFNM---------NTNGLPRRVGDSSTPMSFGLNSRSVEAAEKIQYVGTMEELDG 1211
            Y GSG F           N N   R    S    +   +  S +A+    Y  T+EELD 
Sbjct: 216  YPGSGQFQQSLKDGRYLPNLNIAQRSGVGSHLSNNANHDGESDKASNDSPYRATLEELDN 275

Query: 1210 FCKENKVKDAVEVLTVLENNGIIVDLPRYLLLMQICGEIRVLQYAKTVHDHLIRSLGHVN 1031
            FC E  VK+AV VL +LE   I VDLPRYL LM  C E + L+ AK VH H  + L  + 
Sbjct: 276  FCIEGNVKEAVNVLELLEKLHIPVDLPRYLQLMHQCAENKSLEEAKIVHRHTSQHLSPLQ 335

Query: 1030 LSVHNKVLEMYSSCGSISDAFDVFEKMNERNLTSWDTMITGLAKNGCGEDAIDLFTRFKG 851
            +S +N++LEMY  CGS+ DA ++F  M ERNLT+WDTMIT LAKNG  ED+IDLFT+FK 
Sbjct: 336  VSTYNRILEMYLECGSVDDALNIFNNMPERNLTTWDTMITQLAKNGFAEDSIDLFTQFKN 395

Query: 850  MGLTPDGQMFVGVFLACGVLFDIDEGMLHFESMSKVYGIVLTMEHYLSVVNMLGSTGCLE 671
            +GL PDGQMF+GV  AC VL DIDEGMLHFESMSK YGIV +M H++SVV+M+GS G L+
Sbjct: 396  LGLKPDGQMFIGVLFACSVLGDIDEGMLHFESMSKDYGIVPSMTHFVSVVDMIGSIGHLD 455

Query: 670  EAMEFIEKMPFDPNVEVWESLMNLCIIHGNIELGDHCAKLVNFLDPSRLTDLSKKGLLPA 491
            EA EFIE+MP +P+ E WE+LMNLC +HGN  LGD CA+LV  LD SRL + SK GL+P 
Sbjct: 456  EAFEFIERMPMEPSAETWETLMNLCRVHGNTGLGDRCAELVEQLDSSRLNEQSKAGLVPV 515

Query: 490  -XXXXXXXXXXXXKRSDDLRDMRSKVQEYRAGDTCHPEN---YSLLKGMSAQMKEAGYVP 323
                           S +L ++RS+V+EYRAGDT HPEN   Y+LL+G+ +QMKEAGYVP
Sbjct: 516  KASDLTKEKEKKNLASKNLLEVRSRVREYRAGDTSHPENDKIYALLRGLKSQMKEAGYVP 575

Query: 322  ELRQVLHDVDDESKEEALLSHSERLAVAHGLVNSAARMPIRVIKNLRVCVDCHKALKIMA 143
            E + VLHD+D E KEEALL+HSERLAVA+GL+NS AR P+RVIKNLRVC DCH ALKI++
Sbjct: 576  ETKFVLHDIDQEGKEEALLAHSERLAVAYGLLNSPARAPMRVIKNLRVCGDCHTALKIIS 635

Query: 142  KIVGRQFIMRDTKRFHHFQDGLCSCKDFW 56
            K+VGR+ I+RD KRFHHF+DGLCSC+D+W
Sbjct: 636  KLVGRELIIRDAKRFHHFKDGLCSCRDYW 664