BLASTX nr result

ID: Coptis24_contig00005853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005853
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34881.3| unnamed protein product [Vitis vinifera]              518   e-144
ref|XP_002275670.1| PREDICTED: uncharacterized protein LOC100259...   518   e-144
ref|XP_002300039.1| predicted protein [Populus trichocarpa] gi|2...   496   e-138
ref|XP_004142791.1| PREDICTED: uncharacterized protein LOC101222...   494   e-137
ref|NP_196959.2| Core-2/I-branching beta-1,6-N-acetylglucosaminy...   475   e-132

>emb|CBI34881.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  518 bits (1333), Expect = e-144
 Identities = 237/290 (81%), Positives = 265/290 (91%)
 Frame = -3

Query: 1092 WDAFFKGDKEHRFSVFIHSRPGFVFNKATARSSYFYGRQISDSIQVDWGEATMILAERIL 913
            WDAFF+ +KE++FS+F+HSRPGF+ NKAT RS YF  RQ++DSIQVDWGEA+MI AERIL
Sbjct: 27   WDAFFRDEKENKFSIFVHSRPGFLLNKATTRSVYFLNRQLNDSIQVDWGEASMIQAERIL 86

Query: 912  LGKALNDSHNHRFVFLSDSCIPLYNFSYTYDYIMSTSSSFVDSFADTKEGRYNPKMDPVV 733
            L  AL D  N RFVFLSDSCIPLYNFSY YDYIMSTS+SFVDSFADTKEGRYNPKMDPV+
Sbjct: 87   LRSALLDPLNERFVFLSDSCIPLYNFSYIYDYIMSTSTSFVDSFADTKEGRYNPKMDPVI 146

Query: 732  PVHNWRKGSQWTVLTRKHAELVVRDNAVFPIFQQHCKRKSLPEFWRNRPFPADSSKEHNC 553
            PVHNWRKGSQW VLTRKHA++VV D+ VFP+FQQHCKRKSLPEFWR+ P PAD+SKEHNC
Sbjct: 147  PVHNWRKGSQWVVLTRKHAQIVVEDDTVFPMFQQHCKRKSLPEFWRDHPLPADASKEHNC 206

Query: 552  IPDEHYVQTLLAQEGLEGEIARRTLTHTSWDLSASNDRQRRGWHPMTYRLSDATPTLIQS 373
            IPDEHYVQTLLAQEG E EI RR+LTH+SWDLS+S DR+R+GWHP+TY+ SDATP LIQS
Sbjct: 207  IPDEHYVQTLLAQEGFEEEITRRSLTHSSWDLSSSKDRERKGWHPLTYKFSDATPMLIQS 266

Query: 372  IKDIDNVYYETEYRREWCTSKGKPSPCFLFARKFTRPAALQLLNMSALGA 223
            IKDIDN+YYETEYRREWCTSKGKP+PCFLFARKFTRPAAL+LLNMSALGA
Sbjct: 267  IKDIDNIYYETEYRREWCTSKGKPAPCFLFARKFTRPAALRLLNMSALGA 316


>ref|XP_002275670.1| PREDICTED: uncharacterized protein LOC100259507 [Vitis vinifera]
          Length = 367

 Score =  518 bits (1333), Expect = e-144
 Identities = 237/290 (81%), Positives = 265/290 (91%)
 Frame = -3

Query: 1092 WDAFFKGDKEHRFSVFIHSRPGFVFNKATARSSYFYGRQISDSIQVDWGEATMILAERIL 913
            WDAFF+ +KE++FS+F+HSRPGF+ NKAT RS YF  RQ++DSIQVDWGEA+MI AERIL
Sbjct: 70   WDAFFRDEKENKFSIFVHSRPGFLLNKATTRSVYFLNRQLNDSIQVDWGEASMIQAERIL 129

Query: 912  LGKALNDSHNHRFVFLSDSCIPLYNFSYTYDYIMSTSSSFVDSFADTKEGRYNPKMDPVV 733
            L  AL D  N RFVFLSDSCIPLYNFSY YDYIMSTS+SFVDSFADTKEGRYNPKMDPV+
Sbjct: 130  LRSALLDPLNERFVFLSDSCIPLYNFSYIYDYIMSTSTSFVDSFADTKEGRYNPKMDPVI 189

Query: 732  PVHNWRKGSQWTVLTRKHAELVVRDNAVFPIFQQHCKRKSLPEFWRNRPFPADSSKEHNC 553
            PVHNWRKGSQW VLTRKHA++VV D+ VFP+FQQHCKRKSLPEFWR+ P PAD+SKEHNC
Sbjct: 190  PVHNWRKGSQWVVLTRKHAQIVVEDDTVFPMFQQHCKRKSLPEFWRDHPLPADASKEHNC 249

Query: 552  IPDEHYVQTLLAQEGLEGEIARRTLTHTSWDLSASNDRQRRGWHPMTYRLSDATPTLIQS 373
            IPDEHYVQTLLAQEG E EI RR+LTH+SWDLS+S DR+R+GWHP+TY+ SDATP LIQS
Sbjct: 250  IPDEHYVQTLLAQEGFEEEITRRSLTHSSWDLSSSKDRERKGWHPLTYKFSDATPMLIQS 309

Query: 372  IKDIDNVYYETEYRREWCTSKGKPSPCFLFARKFTRPAALQLLNMSALGA 223
            IKDIDN+YYETEYRREWCTSKGKP+PCFLFARKFTRPAAL+LLNMSALGA
Sbjct: 310  IKDIDNIYYETEYRREWCTSKGKPAPCFLFARKFTRPAALRLLNMSALGA 359


>ref|XP_002300039.1| predicted protein [Populus trichocarpa] gi|222847297|gb|EEE84844.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  496 bits (1277), Expect = e-138
 Identities = 232/291 (79%), Positives = 258/291 (88%)
 Frame = -3

Query: 1092 WDAFFKGDKEHRFSVFIHSRPGFVFNKATARSSYFYGRQISDSIQVDWGEATMILAERIL 913
            WDAFFKG +E RFS+F+HSRPGF+FNKA  RS YF  RQ++DSIQVDWG A+MI AERIL
Sbjct: 61   WDAFFKG-QESRFSIFVHSRPGFLFNKANTRSEYFLNRQVNDSIQVDWGGASMIEAERIL 119

Query: 912  LGKALNDSHNHRFVFLSDSCIPLYNFSYTYDYIMSTSSSFVDSFADTKEGRYNPKMDPVV 733
            L  AL D  N RFVFLSDSCIPLYNFSYTYDYIMSTS+SFVDSFADTKEGRYNPKM P+V
Sbjct: 120  LRHALVDPLNERFVFLSDSCIPLYNFSYTYDYIMSTSTSFVDSFADTKEGRYNPKMAPLV 179

Query: 732  PVHNWRKGSQWTVLTRKHAELVVRDNAVFPIFQQHCKRKSLPEFWRNRPFPADSSKEHNC 553
            PV+NWRKGSQW VLTRKHAE+VV D  VFP+FQQHCKR+SLPEFWR+ P PAD+S EHNC
Sbjct: 180  PVYNWRKGSQWVVLTRKHAEVVVNDTTVFPMFQQHCKRRSLPEFWRDHPIPADTSMEHNC 239

Query: 552  IPDEHYVQTLLAQEGLEGEIARRTLTHTSWDLSASNDRQRRGWHPMTYRLSDATPTLIQS 373
            IPDEHYVQTLLA+EGLEGEI RR+LTH+SWDLS+S D +RRGWHP+TY+ SDATPTLIQS
Sbjct: 240  IPDEHYVQTLLAREGLEGEITRRSLTHSSWDLSSSKDPERRGWHPVTYKFSDATPTLIQS 299

Query: 372  IKDIDNVYYETEYRREWCTSKGKPSPCFLFARKFTRPAALQLLNMSALGAS 220
            IKDIDN+YYETEYRREWC+SKGKPS CFLFARKFTRPAA +LLNM +   S
Sbjct: 300  IKDIDNIYYETEYRREWCSSKGKPSRCFLFARKFTRPAAFRLLNMVSFNFS 350


>ref|XP_004142791.1| PREDICTED: uncharacterized protein LOC101222566 [Cucumis sativus]
            gi|449483780|ref|XP_004156689.1| PREDICTED:
            uncharacterized LOC101222566 [Cucumis sativus]
          Length = 366

 Score =  494 bits (1272), Expect = e-137
 Identities = 229/289 (79%), Positives = 259/289 (89%)
 Frame = -3

Query: 1092 WDAFFKGDKEHRFSVFIHSRPGFVFNKATARSSYFYGRQISDSIQVDWGEATMILAERIL 913
            WD FF+ + E++FS+F+HSRPGF+FNKAT RS+YF  RQ++DSIQVDWGEA+MI AERIL
Sbjct: 75   WDVFFQ-EGENKFSIFVHSRPGFLFNKATTRSTYFLNRQVNDSIQVDWGEASMIEAERIL 133

Query: 912  LGKALNDSHNHRFVFLSDSCIPLYNFSYTYDYIMSTSSSFVDSFADTKEGRYNPKMDPVV 733
            L  AL DS N RFVFLSDSC+PLYNFSYTYDY+MSTS+SFVDSFADTKEGRYNPKMDPV+
Sbjct: 134  LRHALTDSSNQRFVFLSDSCVPLYNFSYTYDYVMSTSTSFVDSFADTKEGRYNPKMDPVI 193

Query: 732  PVHNWRKGSQWTVLTRKHAELVVRDNAVFPIFQQHCKRKSLPEFWRNRPFPADSSKEHNC 553
            PV NWRKGSQW VLTRKHA++VV+D  VFP+FQQHCKRKSLPEFWR+RPFP D SKEHNC
Sbjct: 194  PVQNWRKGSQWVVLTRKHAKVVVKDITVFPMFQQHCKRKSLPEFWRDRPFPNDPSKEHNC 253

Query: 552  IPDEHYVQTLLAQEGLEGEIARRTLTHTSWDLSASNDRQRRGWHPMTYRLSDATPTLIQS 373
            IPDEHYVQTLLAQEGLE E+ RR+LT+++WDLS S D +RR WHP+TY+ SDAT  LIQS
Sbjct: 254  IPDEHYVQTLLAQEGLEEELTRRSLTYSAWDLSYSKDHERRNWHPVTYKFSDATLDLIQS 313

Query: 372  IKDIDNVYYETEYRREWCTSKGKPSPCFLFARKFTRPAALQLLNMSALG 226
            IK IDN+YYETEYRREWCTSKGKPS CFLFARKFTRPAAL+LLNMS LG
Sbjct: 314  IKGIDNIYYETEYRREWCTSKGKPSRCFLFARKFTRPAALRLLNMSLLG 362


>ref|NP_196959.2| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family
            protein [Arabidopsis thaliana]
            gi|209863160|gb|ACI88738.1| At5g14550 [Arabidopsis
            thaliana] gi|332004663|gb|AED92046.1| Core-2/I-branching
            beta-1,6-N-acetylglucosaminyltransferase family protein
            [Arabidopsis thaliana]
          Length = 377

 Score =  475 bits (1223), Expect = e-132
 Identities = 215/290 (74%), Positives = 255/290 (87%)
 Frame = -3

Query: 1098 FGWDAFFKGDKEHRFSVFIHSRPGFVFNKATARSSYFYGRQISDSIQVDWGEATMILAER 919
            F WDAFFKG+ + +FS+++HSRPGFV N+AT RS YF  RQ++DSIQVDWGE+TMI AER
Sbjct: 80   FVWDAFFKGE-DGKFSIYVHSRPGFVLNEATTRSKYFLDRQLNDSIQVDWGESTMIEAER 138

Query: 918  ILLGKALNDSHNHRFVFLSDSCIPLYNFSYTYDYIMSTSSSFVDSFADTKEGRYNPKMDP 739
            +LL  AL DS NHRFVFLSDSCIPLY+FSYTY+YIMST +SFVDSFADTK+ RYNP+M+P
Sbjct: 139  VLLRHALRDSFNHRFVFLSDSCIPLYSFSYTYNYIMSTPTSFVDSFADTKDSRYNPRMNP 198

Query: 738  VVPVHNWRKGSQWTVLTRKHAELVVRDNAVFPIFQQHCKRKSLPEFWRNRPFPADSSKEH 559
            ++PV NWRKGSQW VL RKHAE+VV D +VFP+FQQHC+RKSLPEFWR+RP PA+  KEH
Sbjct: 199  IIPVRNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCRRKSLPEFWRDRPVPAEGWKEH 258

Query: 558  NCIPDEHYVQTLLAQEGLEGEIARRTLTHTSWDLSASNDRQRRGWHPMTYRLSDATPTLI 379
            NCIPDEHYVQTLL+Q+G++ E+ RR+LTH++WDLS+S   +RRGWHPMTY+ SDATP LI
Sbjct: 259  NCIPDEHYVQTLLSQKGVDSELTRRSLTHSAWDLSSSKSNERRGWHPMTYKFSDATPDLI 318

Query: 378  QSIKDIDNVYYETEYRREWCTSKGKPSPCFLFARKFTRPAALQLLNMSAL 229
            QSIK IDN+ YETEYRREWC+SKGKPSPCFLFARKFTRPAAL+LL  + L
Sbjct: 319  QSIKGIDNINYETEYRREWCSSKGKPSPCFLFARKFTRPAALRLLRETIL 368


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