BLASTX nr result

ID: Coptis24_contig00005852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005852
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76156.1| unknown [Picea sitchensis]                             414   e-113
gb|ABR16643.1| unknown [Picea sitchensis]                             412   e-113
dbj|BAK01782.1| predicted protein [Hordeum vulgare subsp. vulgare]    409   e-112
ref|XP_003560507.1| PREDICTED: uncharacterized protein LOC100846...   396   e-108
ref|NP_001058463.1| Os06g0697600 [Oryza sativa Japonica Group] g...   393   e-107

>gb|ADE76156.1| unknown [Picea sitchensis]
          Length = 478

 Score =  414 bits (1065), Expect = e-113
 Identities = 205/454 (45%), Positives = 300/454 (66%), Gaps = 8/454 (1%)
 Frame = +1

Query: 73   WKSLGSLFATFVFIRTAIRDFMPPEVYQFLKLLFSKVFTSLQPNVTILIEEFESSLTNEL 252
            W +LGS+ A  +FIRT  ++++PPE Y FL      +   +  +++++IEE +    +E+
Sbjct: 4    WSNLGSIMAAVIFIRTMAKEYLPPEFYGFLSKSLRSLIGIVSSHISVVIEENDGMKVSEV 63

Query: 253  FDAAQSYLSTKCFSSSRVLKLSKPKNFKNLTFTMSTNQTFEEMFEGIKVKWTFCCVEKKT 432
            ++A Q+YLS +  S+++ LKL KP++ K  TF+M+ N+   E +EGIKV W F   E+K 
Sbjct: 64   YEAVQTYLSVRSCSAAKRLKLKKPQHNKEFTFSMARNEQIAEEYEGIKVWWVFHSSERKQ 123

Query: 433  NSNIY--RASLENRYFQLSFHHKYKEKVQSSYIPYVIEVAETIKLKNRERKLYTNRS--- 597
                     S E RY++L+FH K+K  +   Y+P+V+  A+T+++++R RK+YTN+S   
Sbjct: 124  QIMFSWNSTSEEKRYYKLTFHKKHKHIIFDQYLPHVMAEAKTLEIRSRYRKIYTNQSNSR 183

Query: 598  -FEEDGRYWSFVPFSHPSTFDTLAFDPVLKEDIKADLTKFIKRKEFYGRVGRAWKRGYLL 774
             +E   R W+ V F HP+TF TLA +P LK+DI  DL +F++ +++Y +VGRAWKRGYLL
Sbjct: 184  DYEYRNRVWTPVVFDHPATFGTLALEPELKQDIMEDLQRFLRGEKYYRQVGRAWKRGYLL 243

Query: 775  YGPPGTGKTSLIAAIANFLEFDIYDLELTSVRSNSQLRXXXXXXXXXXXXXXEDIDCSLD 954
            YGPPGTGK+S+IAA+ANFL++DIYDLELT V++N++LR              EDIDCSLD
Sbjct: 244  YGPPGTGKSSMIAAMANFLDYDIYDLELTQVKNNTELRKLLFTTTNKSIIVIEDIDCSLD 303

Query: 955  LSDRSKKAITAEENGNDTEEGK--DKAHRTGSLNSFISLSGVLNFVDGLWSSCGGERLII 1128
            LSDR KK    ++   D +  K      R  + +S ++LSGVLNF DGLWS CG ERL +
Sbjct: 304  LSDRKKKKKPQKDGEEDEKPSKPGKPDERESNEDSKVTLSGVLNFTDGLWSCCGSERLFV 363

Query: 1129 FTTNHKEKLDQALLRPGRMDKHINLTYCEIEAFKMLAKNYLGIEKHELMKDVEEVLPLIK 1308
            FTTNH ++LD ALLR GRMDKHI LT+C   AFK+LA+NYL IE HEL  D+ ++    +
Sbjct: 364  FTTNHVDRLDPALLRSGRMDKHILLTFCTFGAFKILARNYLSIEDHELFPDIGDLTEAAQ 423

Query: 1309 MTPADIGEIFLSCEEDADMGMKRILEKMVEEKEK 1410
            MTPAD+ E  +   +     ++ +++ + E KE+
Sbjct: 424  MTPADVTEHLMKMADHPSRALENLIQALREAKER 457


>gb|ABR16643.1| unknown [Picea sitchensis]
          Length = 473

 Score =  412 bits (1060), Expect = e-113
 Identities = 204/452 (45%), Positives = 300/452 (66%), Gaps = 5/452 (1%)
 Frame = +1

Query: 73   WKSLGSLFATFVFIRTAIRDFMPPEVYQFLKLLFSKVFTSLQPNVTILIEEFESSLTNEL 252
            W +LGS+ AT +FIR+ +R++ P E+         ++   +   ++++IEE +    +E+
Sbjct: 6    WSNLGSILATLIFIRSVVREYFPRELCDLFSKSLRRLLGMVSSYISVVIEENDGMKVSEV 65

Query: 253  FDAAQSYLSTKCFSSSRVLKLSKPKNFKNLTFTMSTNQTFEEMFEGIKVKWTFCCVE--K 426
            ++A Q+YLS +  S++  LKL KPKN ++ TF+M +NQ   + FE IKV+W F  +E  +
Sbjct: 66   YEAVQTYLSARSSSAAERLKLKKPKNSRDFTFSMDSNQRISDKFEDIKVRWAFHSIELSQ 125

Query: 427  KTNSNIYRASLENRYFQLSFHHKYKEKVQSSYIPYVIEVAETIKLKNRERKLYTNRSFEE 606
            KT S     S E RY++L FH K+K K+ S Y+P+VI   + ++L++R RK+YTN     
Sbjct: 126  KTRSPWNPGSDEKRYYELKFHKKHKHKIFSEYLPHVITEGKNLELRSRNRKIYTN----- 180

Query: 607  DGRYWSFVPFSHPSTFDTLAFDPVLKEDIKADLTKFIKRKEFYGRVGRAWKRGYLLYGPP 786
            + RYW+ V F HP+TF TLA +   K++I  DL +F K +++Y +VGRAWKRGYLLYGPP
Sbjct: 181  EYRYWTSVVFDHPATFGTLALETEQKQEILEDLERFSKAEKYYRQVGRAWKRGYLLYGPP 240

Query: 787  GTGKTSLIAAIANFLEFDIYDLELTSVRSNSQLRXXXXXXXXXXXXXXEDIDCSLDLSDR 966
            GTGK+S+IAA+ANFL++DIYDLELT V++N++LR              EDIDCSLDLSDR
Sbjct: 241  GTGKSSMIAAMANFLDYDIYDLELTQVKNNTELRKLLVATTNKSIIVIEDIDCSLDLSDR 300

Query: 967  SKK---AITAEENGNDTEEGKDKAHRTGSLNSFISLSGVLNFVDGLWSSCGGERLIIFTT 1137
             KK      +EE    +E  K + +     +S ++LSGVLNF DGLWS CG ERL +FTT
Sbjct: 301  KKKKKPEKDSEEKEKPSEPSKPEENEPKE-DSKVTLSGVLNFTDGLWSCCGSERLFVFTT 359

Query: 1138 NHKEKLDQALLRPGRMDKHINLTYCEIEAFKMLAKNYLGIEKHELMKDVEEVLPLIKMTP 1317
            NH ++LD ALLR GRMDKHI LT+C+  AFK LA+NYL IE HEL  ++++++  ++MTP
Sbjct: 360  NHIDRLDPALLRSGRMDKHILLTFCKFGAFKTLARNYLSIEDHELFPEIQDLMEAVEMTP 419

Query: 1318 ADIGEIFLSCEEDADMGMKRILEKMVEEKEKQ 1413
            AD+ E  +    +    ++ ++E + + KE++
Sbjct: 420  ADVAEHLMKTSGNPTSALQSLIEALRDAKERR 451


>dbj|BAK01782.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 500

 Score =  409 bits (1052), Expect = e-112
 Identities = 224/477 (46%), Positives = 311/477 (65%), Gaps = 31/477 (6%)
 Frame = +1

Query: 55   MELVLDWKSLGSLFATFVFIRTAIRDFMPPEVYQFLKLLFSKVFTSLQ-PNVTILIEEFE 231
            ME+ LDW+S+GSL AT +  RTA+RDF+PPE  Q+L+ L +++ T+ + P  TILI+E +
Sbjct: 1    MEMFLDWRSVGSLIATVMVFRTAMRDFIPPEAEQWLRRLLARLATAFRAPTATILIDEAD 60

Query: 232  ---SSLTNELFDAAQSYLSTKCFSSSRVLKLSKPKNFKNLTFTMSTNQTFEEMFEGIKVK 402
               S  TN+L+DAAQ YL ++C +++  ++L KP+       ++    T ++ F+G++VK
Sbjct: 61   GASSGATNDLYDAAQLYLGSRCLAAAPAVRLYKPRQSDRAVASLPDAHTADDTFQGVRVK 120

Query: 403  WTFCC--VEKKTNSNIYR--------ASLENRYFQLSFHHKYKEKVQSSYIPYVIEVAET 552
            WT     VE+    N Y         +  ++R  +L F  ++++ V  +YIP+VI+ A  
Sbjct: 121  WTSTARPVERGAGHNPYNVFGSRGGGSGGDHRSLELQFPRQHRDFVHDTYIPHVIDEATR 180

Query: 553  IKLKNRERKLYTNRSF---EEDGRYWSFVPFSHPSTFDTLAFDPVLKEDIKADLTKFIKR 723
            ++LK+RER+LYTNR+    ++  R W+   FSHPSTFDTLA DP L+E+I+ADL +F  R
Sbjct: 181  MRLKSRERRLYTNRAAAPGDDHHRLWTSHTFSHPSTFDTLAVDPALREEIRADLLRFAAR 240

Query: 724  KEFYGRVGRAWKRGYLLYGPPGTGKTSLIAAIANFLEFDIYDLELTSVRSNSQLRXXXXX 903
            +E Y RVGRAWKRGYLL+GPPGTGKTSL+AAIAN LEFD+YDLELT+V +NS LR     
Sbjct: 241  REHYARVGRAWKRGYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSHLRRLLVS 300

Query: 904  XXXXXXXXXEDIDCSLDLSDRSKKAITAEENGNDTEEGKDKAHRTGSL--NSFISLSGVL 1077
                     EDIDCSLDLSDR K +  A+E+          A    +      ISLSGVL
Sbjct: 301  TTPKSVVVVEDIDCSLDLSDRKKNSGGADEDNAQLAMLSPAAAAAMAAIGRESISLSGVL 360

Query: 1078 NFVDGLWSSCGGERLIIFTTNHKEKLDQALLRPGRMDKHINLTYCEIEAFKMLAKNYLGI 1257
            NFVDGLWSSC GERL+IFTTNH E+LD ALLRPGRMD+ I L YC   A ++LAKNYLG+
Sbjct: 361  NFVDGLWSSCVGERLMIFTTNHPERLDPALLRPGRMDRKIELGYCTPAALRVLAKNYLGV 420

Query: 1258 EKHE----------LMKDVEEVLPL-IKMTPADIGEIFLSCE-EDADMGMKRILEKM 1392
             +            LM + E +L   +++TPADIGE+F+ C+   A   ++R++ ++
Sbjct: 421  GEDPDDEPGAVVDGLMAEAEGLLAADVRITPADIGEVFMGCDGAGASAALRRLVGEL 477


>ref|XP_003560507.1| PREDICTED: uncharacterized protein LOC100846466 [Brachypodium
            distachyon]
          Length = 667

 Score =  396 bits (1018), Expect = e-108
 Identities = 224/494 (45%), Positives = 305/494 (61%), Gaps = 41/494 (8%)
 Frame = +1

Query: 55   MELVLDWKSLGSLFATFVFIRTAIRDFMPPEVYQFLKLLFSKVFTSLQ-PNVTILIEEFE 231
            ME+VLDW+S+GSL AT +  RTA+RD +PPE  ++L+LL ++V  + + P  TI I+E +
Sbjct: 1    MEMVLDWRSVGSLIATAMVFRTALRDLIPPEAERWLRLLVARVAAAFRGPLGTIHIDEAD 60

Query: 232  SSLT-----NELFDAAQSYLSTKCFSSSRVLKLSKPKNFKNLTFTMSTNQTFEEMFEGIK 396
               T     N+L+DAAQ YL ++C +++  ++L KP+   +   ++    T  + F G++
Sbjct: 61   HGATAGGAANDLYDAAQLYLGSRCLATAPAVRLYKPRQASHAVASLPDAHTTTDTFRGVR 120

Query: 397  VKWTFCCVEKKTNS-NIYR-----------ASLENRYFQLSFHHKYKEKVQSSYIPYVIE 540
            VKWT        N+ N Y            + +E R  +L+F  +++E V   YI +VI 
Sbjct: 121  VKWTSTARPANNNNPNPYNPFARGSSSGGSSGVEQRSLELTFPRQHRELVHEQYIEHVIG 180

Query: 541  VAETIKLKNRERKLYTNRSFEEDGRY------WSFVPFSHPSTFDTLAFDPVLKEDIKAD 702
            VA T++LK+RER+LYTNR+      +      W+   F+HPSTF TLA DP L+++I+AD
Sbjct: 181  VATTMRLKSRERRLYTNRATSPGDEHHSHRGLWTSHAFAHPSTFGTLAVDPALRDEIRAD 240

Query: 703  LTKFIKRKEFYGRVGRAWKRGYLLYGPPGTGKTSLIAAIANFLEFDIYDLELTSVRSNSQ 882
            LT+F  R+E Y RVGRAWKRGYLL+GPPGTGKTSL+AAIAN LEFD+YDLELT+V +NS 
Sbjct: 241  LTRFAGRREHYARVGRAWKRGYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSH 300

Query: 883  LRXXXXXXXXXXXXXXEDIDCSLDLSDRSKKAITAEENGNDTEEGKDKAHRTGSL-NSFI 1059
            LR              EDIDCSLDLSDR+KK      N +        A    ++    I
Sbjct: 301  LRRLLVSTTPKSVIVVEDIDCSLDLSDRNKKKNNNTANEDTAILSPAAAMAAAAVGRESI 360

Query: 1060 SLSGVLNFVDGLWSSCGGERLIIFTTNHKEKLDQALLRPGRMDKHINLTYCEIEAFKMLA 1239
            SLSGVLNFVDGLWSSC GERL+IFTTNH E+LD ALLRPGRMD+ I L YC   A ++LA
Sbjct: 361  SLSGVLNFVDGLWSSCVGERLMIFTTNHPERLDPALLRPGRMDRKIELGYCTPAALRVLA 420

Query: 1240 KNYLGIEKHE---------------LMKDVEEVLPL-IKMTPADIGEIFLSCEEDADMGM 1371
            KNYLG+   +               LM + E +L   +++TPADIGE+F+ C+     G 
Sbjct: 421  KNYLGVGVGDDPAACDDDDPGMVDALMAEAERLLAADVRITPADIGEVFMGCD---GAGA 477

Query: 1372 KRILEKMVEEKEKQ 1413
               L K+V E  ++
Sbjct: 478  SAALRKLVHELRRR 491


>ref|NP_001058463.1| Os06g0697600 [Oryza sativa Japonica Group]
            gi|53793233|dbj|BAD54458.1| AAA-type ATPase-like [Oryza
            sativa Japonica Group] gi|113596503|dbj|BAF20377.1|
            Os06g0697600 [Oryza sativa Japonica Group]
            gi|125598369|gb|EAZ38149.1| hypothetical protein
            OsJ_22501 [Oryza sativa Japonica Group]
          Length = 504

 Score =  393 bits (1010), Expect = e-107
 Identities = 223/490 (45%), Positives = 302/490 (61%), Gaps = 37/490 (7%)
 Frame = +1

Query: 55   MELVLDWKSLGSLFATFVFIRTAIRDFMPPEVYQFLKLLFSKVFTSLQPNV-TILIEEFE 231
            ME+VLDW+S+GSL AT +  RTA+RDF+PPE   FL+ L +++  + +P+V TILI+E +
Sbjct: 1    MEMVLDWRSVGSLLATIMVFRTAMRDFLPPEAEIFLRRLLTRLAAAFRPHVGTILIDEAD 60

Query: 232  --SSLTNELFDAAQSYLSTKCFSSSRVLKLSKPKNFKNLTFTMSTNQTFEEMFEGIKVKW 405
              S   N+L+DA+Q YL  +C +++  ++L KP        ++    T  ++F G+ VKW
Sbjct: 61   GASGGANDLYDASQLYLGARCLATAPTVRLHKPHQAPRPVASLPDAHTTHDVFRGVLVKW 120

Query: 406  TFCCVEKKTNS--------NIYR------ASLENRYFQLSFHHKYKEKVQSSYIPYVIEV 543
            T   VE+  ++        N Y          E R  +L F  +++E +   YI +VI+ 
Sbjct: 121  TARPVERGASAGGGGGGVFNPYNPYGRGGGGGEPRRLELQFPRQHRELIHGHYIQHVIDE 180

Query: 544  AETIKLKNRERKLYTNRSF---EEDGRYWSFVPFSHPSTFDTLAFDPVLKEDIKADLTKF 714
            A  ++L++RER+LYTNR+    ++  R W+   FSHPSTFDTLA DP L++DI+ADL +F
Sbjct: 181  ATKMRLRSRERRLYTNRAAAPGDDHHRLWTSHAFSHPSTFDTLAVDPALRDDIRADLLRF 240

Query: 715  IKRKEFYGRVGRAWKRGYLLYGPPGTGKTSLIAAIANFLEFDIYDLELTSVRSNSQLRXX 894
              R+E Y RVGRAWKRGYLL+GPPGTGKTSL+AAIAN LEFD+YDLELT+V +NS LR  
Sbjct: 241  AARREHYARVGRAWKRGYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSHLRRL 300

Query: 895  XXXXXXXXXXXXEDIDCSLDLSDRSKKAITAEENGNDTEEGKDKAHRTGSL-NSFISLSG 1071
                        EDIDCSLDLSDR  KA   E     +      A    ++    ISLSG
Sbjct: 301  LVSTTPKSVVVVEDIDCSLDLSDRKNKASDDENAAQLSIISPAAAAAMAAMGRESISLSG 360

Query: 1072 VLNFVDGLWSSCGGERLIIFTTNHKEKLDQALLRPGRMDKHINLTYCEIEAFKMLAKNYL 1251
            VLNFVDGLWSSC GERL++FTTNH E+LD ALLRPGRMD+ I L YC   A ++LAKNYL
Sbjct: 361  VLNFVDGLWSSCVGERLMVFTTNHPERLDPALLRPGRMDRKIELGYCSPPALRVLAKNYL 420

Query: 1252 GIEKHE---------------LMKDVEEVLPL-IKMTPADIGEIFLSCEEDADMGMKRIL 1383
            G+   +               LM D E +L   + +TPADI E+F+ C+     G    L
Sbjct: 421  GVGVGDEGCEDAADDPDTVSGLMADAEGLLAAGVLITPADIAEVFMGCD---GAGATAAL 477

Query: 1384 EKMVEEKEKQ 1413
             K+ +E  ++
Sbjct: 478  RKLADELRRR 487


Top