BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005850
         (1612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g...   129   2e-27
gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...   128   5e-27
gb|EEC80541.1| hypothetical protein OsI_22839 [Oryza sativa Indi...   125   4e-26
ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355...   112   2e-22
emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]   109   2e-21

>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
            gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
            Japonica Group]
          Length = 443

 Score =  129 bits (325), Expect = 2e-27
 Identities = 80/248 (32%), Positives = 117/248 (47%), Gaps = 17/248 (6%)
 Frame = +2

Query: 398  LLEQTNQTVNQTAQGVTRLETGSTXXXXXXXXXXXXXXXXXXXLRRPDQKDWSKQVE--- 568
            ++EQ N   N T+Q       G+T                   +    Q+   +Q+E   
Sbjct: 88   IMEQNNNNNNGTSQDGNNTSHGATGLIIPSASNQDPWANLLANILGKQQETQQRQMEILE 147

Query: 569  -------------RFLKMDPPKFGGTTDPSEAENWKEDMETLFSVMGYTGIQKQRLATVC 709
                          F K+ PP F GT +P EAE W   ME  F  MG T  +K   AT  
Sbjct: 148  RITKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYM 207

Query: 710  LRGDASIWWKSVSRA-DEHLLLTWTEFRQRFDLQYFPQSLRSAKTREFMALKQGMMTVFE 886
            L+  A  WW +  ++  E + +TW  F++ F  +YFP+S++  K +EF+ LKQG  +V E
Sbjct: 208  LQSSAFEWWDAHKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAE 267

Query: 887  YETQFHRLSRLANRVYLDEAKKARQFEEGLADYLRPLVKTREHKTLREVIDAARILEQDH 1066
            YE +F RL+R A      +  KAR+FE GL   L+  V+  E    REV+  A++LE+  
Sbjct: 268  YEIEFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLEKGE 327

Query: 1067 IDHPTTID 1090
                TT+D
Sbjct: 328  DSVETTLD 335


>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
            gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
            kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
            Group] gi|31431495|gb|AAP53268.1| retrotransposon
            protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1230

 Score =  128 bits (321), Expect = 5e-27
 Identities = 90/326 (27%), Positives = 133/326 (40%), Gaps = 21/326 (6%)
 Frame = +2

Query: 401  LEQTNQTVNQTAQGVTRLETGSTXXXXXXXXXXXXXXXXXXXLRRPDQKDWSKQVE---- 568
            +EQ N   N T+Q       G+T                   +    Q+   +Q+E    
Sbjct: 1    MEQNNNNNNGTSQDGNNTSHGATGLIIPSASNQDPWANLLANILGKQQETQQRQMEILER 60

Query: 569  ------------RFLKMDPPKFGGTTDPSEAENWKEDMETLFSVMGYTGIQKQRLATVCL 712
                         F K+ PP F GT +P EAE W   ME  F  MG T  +K   AT  L
Sbjct: 61   ITKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYML 120

Query: 713  RGDASIWWKSVSRA-DEHLLLTWTEFRQRFDLQYFPQSLRSAKTREFMALKQGMMTVFEY 889
            +  A  WW +  ++  E + +TW  F++ F  +YFP+S++  K +EF+ LKQG  +V EY
Sbjct: 121  QSSAFEWWDAHKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEY 180

Query: 890  ETQFHRLSRLANRVYLDEAKKARQFEEGLADYLRPLVKTREHKTLREVIDAARILE---- 1057
            E +F RL+R A      +  KAR+FE GL   L+  V+  E    REV+  A++LE    
Sbjct: 181  EIEFSRLARFAPEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLEKGYH 240

Query: 1058 QDHIDHPTTIDTNKYEGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTEDRPPFY 1237
            +  I+H       K                                          P  +
Sbjct: 241  EQRIEHGQPQKKFKTNNPQNQGRFRGNYSGQMQRKSSENQGRKCPICQGSHVPSICPNCW 300

Query: 1238 GHCYNCGDQGHVARDCKKPKVRRSKH 1315
            G C+ CG+ GH    C  P +++ K+
Sbjct: 301  GRCFECGEAGHTRYQC--PLLQKGKN 324


>gb|EEC80541.1| hypothetical protein OsI_22839 [Oryza sativa Indica Group]
          Length = 285

 Score =  125 bits (313), Expect = 4e-26
 Identities = 66/166 (39%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
 Frame = +2

Query: 572  FLKMDPPKFGGTTDPSEAENWKEDMETLFSVMGYTGIQKQRLATVCLRGDASIWWKSVSR 751
            F K+ PP F GT +P +AE+W   ME  F  MGYT  +K   AT  L+  A  WW +  +
Sbjct: 56   FQKLKPPTFSGTANPPKAEDWIVAMEKAFEAMGYTDKEKIIYATYMLQSSAFEWWDAHKK 115

Query: 752  A-DEHLLLTWTEFRQRFDLQYFPQSLRSAKTREFMALKQGMMTVFEYETQFHRLSRLANR 928
            +  E + +TW  F++ F  +YFP+S++  K +EF+ LKQ   +V EYE +F RL+RLA  
Sbjct: 116  SYSERISITWELFKEAFCKKYFPESVKRMKEKEFLELKQCNKSVAEYEIEFSRLARLAPE 175

Query: 929  VYLDEAKKARQFEEGLADYLRPLVKTREHKTLREVIDAARILEQDH 1066
                +  KAR+FE GL   L+  V+  E    REV+  A++LE+ +
Sbjct: 176  FVQMDGSKARRFESGLRQPLKRCVEAFELTIFREVVSKAQLLEEGY 221


>ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355506807|gb|AES87949.1| Pol
            polyprotein [Medicago truncatula]
          Length = 745

 Score =  112 bits (281), Expect = 2e-22
 Identities = 61/189 (32%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
 Frame = +2

Query: 554  SKQVERFLKMDPPKFGGTTDPSEAENWKEDMETLFSVMGYTGIQKQRLATVCLRGDASIW 733
            ++ +E F+K +PP F G  DP  A+ W +++E +F VM  T  QK R  T  L  +A  W
Sbjct: 34   ARMLETFMKKNPPTFKGRCDPDGAQTWLKEIERIFRVMQCTEDQKVRFGTHQLAEEADDW 93

Query: 734  WKSV--SRADEHLLLTWTEFRQRFDLQYFPQSLRSAKTREFMALKQGMMTVFEYETQFHR 907
            W ++  +   E  ++TW  FR+ F  +YFP+ +R  K  EF+ LKQG M+V EY  +F  
Sbjct: 94   WVALLPTLGQEGAVVTWAVFRREFLRRYFPEDVRGKKEIEFLELKQGNMSVTEYAAKFVE 153

Query: 908  LSRLANRVYLDEAKKAR--QFEEGLADYLRPLVKTREHKTLREVIDAARILEQDHIDHPT 1081
            LS+       + A+ +R  +FE GL   ++  +  ++ +  ++++++ RI E+D   H  
Sbjct: 154  LSKFYPHYTAENAEFSRCIKFENGLRPDIKRAIGYQQLRVFQDLVNSCRIYEEDTKAHYK 213

Query: 1082 TIDTNKYEG 1108
             ++  K +G
Sbjct: 214  VVNERKGKG 222


>emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]
          Length = 360

 Score =  109 bits (273), Expect = 2e-21
 Identities = 73/241 (30%), Positives = 104/241 (43%), Gaps = 3/241 (1%)
 Frame = +2

Query: 572  FLKMDPPKFGGTTDPSEAENWKEDMETLFSVMGYTGIQKQRLATVCLRGDASIWWKSVSR 751
            F K+ PP F G TDP+EAE W   ME  F V+  +  QK   A   L  +   WW+   R
Sbjct: 103  FKKLGPPYFSGATDPTEAEAWILKMEKFFGVIDCSEEQKASYAAFMLDKETDHWWRMTRR 162

Query: 752  A-DEHLLLTWTEFRQRFDLQYFPQSLRSAKTREFMALKQGMMTVFEYETQFHRLSRLANR 928
              ++   +TW +FR+ F  +YFP S+R  K  EF+ L+QG MTV +YE +F  LSR + +
Sbjct: 163  LLEDQGPITWRQFREAFYKKYFPDSVRRQKVGEFIRLEQGDMTVAQYEAKFTELSRFSPQ 222

Query: 929  VYLDEAKKARQFEEGLADYLRPLVKTREHKTLREVIDAARILEQDHIDHPTTIDTNKYEG 1108
            +   E +KA +F++ L  YL+            E  +  R               N+ +G
Sbjct: 223  LIATEEEKALKFQDXLKPYLKNKXSILXLGXYSEYREQQR-------------KRNRSDG 269

Query: 1109 GDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTEDRPPF--YGHCYNCGDQGHVARD 1282
                                                  RP +   G C+ CG QGH+ RD
Sbjct: 270  AHGNQXQRRSTSGRNQNKGKAAQNLDGACPTCGKKHGGRPCYRETGACFGCGKQGHLIRD 329

Query: 1283 C 1285
            C
Sbjct: 330  C 330