BLASTX nr result

ID: Coptis24_contig00005848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005848
         (1904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV64030.1| 5-enolpyruvylshikimate 3-phosphate synthase [Camp...   776   0.0  
ref|XP_002280922.1| PREDICTED: 3-phosphoshikimate 1-carboxyvinyl...   764   0.0  
gb|ABA54869.1| putative 5-enolpyruvylshikimate 3-phosphate synth...   763   0.0  
ref|XP_003521857.1| PREDICTED: 3-phosphoshikimate 1-carboxyvinyl...   762   0.0  
ref|XP_003517039.1| PREDICTED: 3-phosphoshikimate 1-carboxyvinyl...   749   0.0  

>gb|AAV64030.1| 5-enolpyruvylshikimate 3-phosphate synthase [Camptotheca acuminata]
          Length = 519

 Score =  776 bits (2004), Expect = 0.0
 Identities = 406/520 (78%), Positives = 444/520 (85%), Gaps = 8/520 (1%)
 Frame = -2

Query: 1852 MAQVSNMARCLQTGNNFITDLPKSRNAKALNCIRIGSESKSL-SLVFGRKAVKFNNNSTC 1676
            MAQVSN+   +Q G+ F  + PK++N+  +  +  GS+ KS   L  GR AV   N+   
Sbjct: 1    MAQVSNIPNGVQNGH-FRPNFPKTQNSVQVYSVFCGSKLKSSWCLNHGRVAV---NSPVI 56

Query: 1675 GFRVD---ASSVAAAEKPSKVPEIVLQPIKEISGVVKLPGSKSLSNRILLLAALSEGTTV 1505
              RV    ++SV   EK S  PEIVLQPIKEISG VKLPGSKSLSNRILLLAALSEGTTV
Sbjct: 57   NVRVPLRVSASVVTTEKTSMTPEIVLQPIKEISGTVKLPGSKSLSNRILLLAALSEGTTV 116

Query: 1504 LDNLLNSEDIHYMLGALKTLGLQLEVDSPNNRAVVEGCGGQFPVGKESTEEVQLFLGNAG 1325
            +DNLLNS+D+HYMLGAL+TLGL++E DS   RA+VEGC G FPVGKEST+EVQLFLGNAG
Sbjct: 117  VDNLLNSDDVHYMLGALRTLGLRVEEDSAIKRAIVEGCSGLFPVGKESTDEVQLFLGNAG 176

Query: 1324 TAMRPLTAAVIAAGGNARYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGTNCPPVRVN 1145
            TAMRPLTAAV AAGGN+ Y+LDGVPRMRERPIGDLV GLKQLGADVDCFLGTNCPPVRV 
Sbjct: 177  TAMRPLTAAVTAAGGNSSYILDGVPRMRERPIGDLVTGLKQLGADVDCFLGTNCPPVRVI 236

Query: 1144 GNGGLPGGKVKLSGTISSQYLTSLLMAAPLALGDVEIEIMDKLISIPYVEMTLKLMERFG 965
            G GGLPGGKVKLSG+ISSQYLT+LLMAAPLALGDVEIEI+DKLISIPYVEMTLKLM+RFG
Sbjct: 237  GKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISIPYVEMTLKLMKRFG 296

Query: 964  VSVEHSDSWDHFLVQGGQKYKSPGNAFVEGDASSASYFLXXXXXXXXXXXXXXXXTSSLQ 785
            V+VEHSD+WD FL+QGGQKYKSPGN++VEGDASSASYFL                +SSLQ
Sbjct: 297  VTVEHSDNWDRFLIQGGQKYKSPGNSYVEGDASSASYFLAGAAVTGGTITVEGCGSSSLQ 356

Query: 784  GDVKFAEVLEMMGAKVTWSENSVTVTGPPRG----KRLHAVDVNMNKMPDVAMTLAVVAL 617
            GDVKFAEVLE MGAKVTW+ENSVTVTGPPR     K L AVDVNMNKMPDVAMTLAVVAL
Sbjct: 357  GDVKFAEVLEKMGAKVTWTENSVTVTGPPRNSSGRKHLRAVDVNMNKMPDVAMTLAVVAL 416

Query: 616  FADGPTAIRDVASWRVKETERMIAVCTELRKLGATVEEGPDYCVITPPERLNVTAIDTYD 437
            FADGPTAIRDVASWRVKETERMIA+CTELRKLGATVEEGPDYCVITPPE+LNVTA+DTYD
Sbjct: 417  FADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTAVDTYD 476

Query: 436  DHRMAMAFSLAACADVPVTIKDPGCTRKTFPDYFEVLQRF 317
            DHRMAMAFSLAACA+VPVTIKDPGCTRKTFPDYFEVLQRF
Sbjct: 477  DHRMAMAFSLAACANVPVTIKDPGCTRKTFPDYFEVLQRF 516


>ref|XP_002280922.1| PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase,
            chloroplastic [Vitis vinifera]
            gi|296089200|emb|CBI38903.3| unnamed protein product
            [Vitis vinifera] gi|323695712|gb|ACY29662.2|
            5-enolpyruvylshikimate-3-phosphate synthase [Vitis
            vinifera]
          Length = 521

 Score =  764 bits (1972), Expect = 0.0
 Identities = 394/485 (81%), Positives = 417/485 (85%), Gaps = 4/485 (0%)
 Frame = -2

Query: 1756 IRIGSESKSLSLVFGRKAVKFNNNSTCGFRVDASSVAAAEKPSKVPEIVLQPIKEISGVV 1577
            +R G    S SL   R       +    FRV AS VA  EKPS  PEIVLQPIKEISG +
Sbjct: 36   LRSGPNVSSFSLKHERAVSNSIVSVRAPFRVSAS-VATKEKPSTAPEIVLQPIKEISGTI 94

Query: 1576 KLPGSKSLSNRILLLAALSEGTTVLDNLLNSEDIHYMLGALKTLGLQLEVDSPNNRAVVE 1397
             LPGSKSLSNRILLLAALSEGTTV+DNLLNSED+HYMLGAL+TLGL +E  S N R +V+
Sbjct: 95   TLPGSKSLSNRILLLAALSEGTTVVDNLLNSEDVHYMLGALRTLGLHVEEQSENKRVIVQ 154

Query: 1396 GCGGQFPVGKESTEEVQLFLGNAGTAMRPLTAAVIAAGGNARYVLDGVPRMRERPIGDLV 1217
            GCGGQFP G  S  EVQLFLGNAGTAMRPLTAAV AAGGNA YVLDGVPRMRERPIGDLV
Sbjct: 155  GCGGQFPAGNGSVGEVQLFLGNAGTAMRPLTAAVTAAGGNASYVLDGVPRMRERPIGDLV 214

Query: 1216 VGLKQLGADVDCFLGTNCPPVRVNGNGGLPGGKVKLSGTISSQYLTSLLMAAPLALGDVE 1037
             GLKQLGADV+CFLGTNCPPVRVNGNGGLPGGKVKLSG+ISSQYLT+LLMAAPLALGDVE
Sbjct: 215  TGLKQLGADVNCFLGTNCPPVRVNGNGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVE 274

Query: 1036 IEIMDKLISIPYVEMTLKLMERFGVSVEHSDSWDHFLVQGGQKYKSPGNAFVEGDASSAS 857
            IEI+DKLISIPYVEMTLKLMERFGVSVEHS++WD FL++GGQKYKSPGNAFVEGDASSAS
Sbjct: 275  IEIIDKLISIPYVEMTLKLMERFGVSVEHSNTWDRFLIRGGQKYKSPGNAFVEGDASSAS 334

Query: 856  YFLXXXXXXXXXXXXXXXXTSSLQGDVKFAEVLEMMGAKVTWSENSVTVTGPPRG----K 689
            YFL                TSSLQGDVKFAEVLE MGAKV+W ENSVTVTGPPR     K
Sbjct: 335  YFLAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEQMGAKVSWMENSVTVTGPPRDSSGRK 394

Query: 688  RLHAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAVCTELRKLGATV 509
             L A+DVNMNKMPDVAMTLAVVAL+ADGPTAIRDVASWRVKETERMIA+CTELRKLGATV
Sbjct: 395  HLRAIDVNMNKMPDVAMTLAVVALYADGPTAIRDVASWRVKETERMIAICTELRKLGATV 454

Query: 508  EEGPDYCVITPPERLNVTAIDTYDDHRMAMAFSLAACADVPVTIKDPGCTRKTFPDYFEV 329
            EEGPDYCVITPPE+LNVT+IDTYDDHRMAMAFSLAACADVPVTIKDPGCTRKTFPDYFEV
Sbjct: 455  EEGPDYCVITPPEKLNVTSIDTYDDHRMAMAFSLAACADVPVTIKDPGCTRKTFPDYFEV 514

Query: 328  LQRFT 314
            LQRFT
Sbjct: 515  LQRFT 519


>gb|ABA54869.1| putative 5-enolpyruvylshikimate 3-phosphate synthase [Fagus
            sylvatica]
          Length = 520

 Score =  763 bits (1970), Expect = 0.0
 Identities = 402/520 (77%), Positives = 436/520 (83%), Gaps = 7/520 (1%)
 Frame = -2

Query: 1852 MAQVSNMARCLQTGNNFITDLPKSRNAKALNCIRIGSE--SKSLSLVFGRKAVKFNNNST 1679
            MAQVS +    Q+   F  + PK +  K++  I  GS+    S S     K V    ++ 
Sbjct: 1    MAQVSKICSGAQSTQIFHNN-PKPQKPKSIGFISFGSQLLGSSTSWTLKNKHVCAVGSAK 59

Query: 1678 CG-FRVDASSVAAAEKPSKVPEIVLQPIKEISGVVKLPGSKSLSNRILLLAALSEGTTVL 1502
             G FRV AS VA AEKPS VPEIVLQPIK+ISG +KLPGSKSLSNRILLLAALSEGTTV+
Sbjct: 60   VGTFRVSAS-VATAEKPSTVPEIVLQPIKDISGTIKLPGSKSLSNRILLLAALSEGTTVV 118

Query: 1501 DNLLNSEDIHYMLGALKTLGLQLEVDSPNNRAVVEGCGGQFPVGKESTEEVQLFLGNAGT 1322
            DNLLNS+DIHYMLGALKTLGL++E D    RA+VEGCGG FPVGKES +E+QLFLGNAGT
Sbjct: 119  DNLLNSDDIHYMLGALKTLGLRVEEDKAIKRAIVEGCGGLFPVGKESRDEIQLFLGNAGT 178

Query: 1321 AMRPLTAAVIAAGGNARYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGTNCPPVRVNG 1142
            AMRPLTAAV  AGGN+ YVLDGVPRMRERPIGDLV GL+QLGA+VDCFLGT CPPVRV G
Sbjct: 179  AMRPLTAAVTVAGGNSSYVLDGVPRMRERPIGDLVDGLQQLGANVDCFLGTKCPPVRVFG 238

Query: 1141 NGGLPGGKVKLSGTISSQYLTSLLMAAPLALGDVEIEIMDKLISIPYVEMTLKLMERFGV 962
             GGLPGGKVKLSG+ISSQYLT+L+MAAPLALGDVEIEI+DKLIS+PYVEMTLKLMERFG+
Sbjct: 239  KGGLPGGKVKLSGSISSQYLTALVMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGI 298

Query: 961  SVEHSDSWDHFLVQGGQKYKSPGNAFVEGDASSASYFLXXXXXXXXXXXXXXXXTSSLQG 782
            SVEH+DSWD FL++GGQKYKSPGNA+VEGDASSASYFL                TSSLQG
Sbjct: 299  SVEHNDSWDRFLIRGGQKYKSPGNAYVEGDASSASYFLAGAAVTGGTVTVEGCGTSSLQG 358

Query: 781  DVKFAEVLEMMGAKVTWSENSVTVTGPP----RGKRLHAVDVNMNKMPDVAMTLAVVALF 614
            DVKFAEVLE MGAKVTWSE SVTVTGPP    + K L A+DVNMNKMPDVAMTLAVVALF
Sbjct: 359  DVKFAEVLEKMGAKVTWSETSVTVTGPPQDSSKKKHLRAIDVNMNKMPDVAMTLAVVALF 418

Query: 613  ADGPTAIRDVASWRVKETERMIAVCTELRKLGATVEEGPDYCVITPPERLNVTAIDTYDD 434
            ADGPTAIRDVASWRVKETERMIAVCTELRKLGATVEEGPDYCVITPPE+LNVT IDTYDD
Sbjct: 419  ADGPTAIRDVASWRVKETERMIAVCTELRKLGATVEEGPDYCVITPPEKLNVTDIDTYDD 478

Query: 433  HRMAMAFSLAACADVPVTIKDPGCTRKTFPDYFEVLQRFT 314
            HRMAMAFSLAAC DVPVTI DPGCTRKTFPDYFEVLQRFT
Sbjct: 479  HRMAMAFSLAACGDVPVTINDPGCTRKTFPDYFEVLQRFT 518


>ref|XP_003521857.1| PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase,
            chloroplastic-like [Glycine max]
          Length = 526

 Score =  762 bits (1967), Expect = 0.0
 Identities = 400/524 (76%), Positives = 441/524 (84%), Gaps = 9/524 (1%)
 Frame = -2

Query: 1858 SEMAQVSNMARCLQT-GNNFITDLPKSRNAKALNCIRIGSESKSLSLVFGRKAVKFNNNS 1682
            +++++V N+A+  Q  G++   + PKS N+ +L   R+   SKS  LV    ++  N N+
Sbjct: 2    AQVSRVHNLAQSTQIFGHSSNPNEPKSANSVSLRP-RLWGPSKSRILVHKTGSLMGNFNA 60

Query: 1681 TCG----FRVDASSVAAAEKPSKVPEIVLQPIKEISGVVKLPGSKSLSNRILLLAALSEG 1514
              G    F+V AS  AAAEKPS  PEIVL+PIK+ISG + LPGSKSLSNRILLLAALSEG
Sbjct: 61   GKGNSGMFKVSASVAAAAEKPSTAPEIVLEPIKDISGTITLPGSKSLSNRILLLAALSEG 120

Query: 1513 TTVLDNLLNSEDIHYMLGALKTLGLQLEVDSPNNRAVVEGCGGQFPVGKESTEEVQLFLG 1334
            TTV+DNLL SEDIHYMLGAL+TLGL++E D    +A+VEGCGG FP  KES +E+ LFLG
Sbjct: 121  TTVVDNLLYSEDIHYMLGALRTLGLRVEDDQTTKQAIVEGCGGLFPTIKESKDEINLFLG 180

Query: 1333 NAGTAMRPLTAAVIAAGGNARYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGTNCPPV 1154
            NAGTAMRPLTAAV+AAGGNA YVLDGVPRMRERPIGDLV GLKQLGADVDCFLGTNCPPV
Sbjct: 181  NAGTAMRPLTAAVVAAGGNASYVLDGVPRMRERPIGDLVAGLKQLGADVDCFLGTNCPPV 240

Query: 1153 RVNGNGGLPGGKVKLSGTISSQYLTSLLMAAPLALGDVEIEIMDKLISIPYVEMTLKLME 974
            RVNG GGLPGGKVKLSG+ISSQYLT+LLMAAPLALGDVEIEI+DKLIS+PYVEMTLKLME
Sbjct: 241  RVNGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIVDKLISVPYVEMTLKLME 300

Query: 973  RFGVSVEHSDSWDHFLVQGGQKYKSPGNAFVEGDASSASYFLXXXXXXXXXXXXXXXXTS 794
            RFGVSVEHS +WD FLV GGQKYKSPGNAFVEGDASSASYFL                T+
Sbjct: 301  RFGVSVEHSGNWDKFLVHGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVNGCGTN 360

Query: 793  SLQGDVKFAEVLEMMGAKVTWSENSVTVTGPPRG----KRLHAVDVNMNKMPDVAMTLAV 626
            SLQGDVKFAEVLE MGAKVTWSENSVTVTGPP+     K L  +DVNMNKMPDVAMTLAV
Sbjct: 361  SLQGDVKFAEVLEKMGAKVTWSENSVTVTGPPQDSSGQKVLQGIDVNMNKMPDVAMTLAV 420

Query: 625  VALFADGPTAIRDVASWRVKETERMIAVCTELRKLGATVEEGPDYCVITPPERLNVTAID 446
            VALFA+G TAIRDVASWRVKETERMIA+CTELRKLGATVEEGPDYCVITPPE+LNVTAID
Sbjct: 421  VALFANGQTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTAID 480

Query: 445  TYDDHRMAMAFSLAACADVPVTIKDPGCTRKTFPDYFEVLQRFT 314
            TYDDHRMAMAFSLAAC DVPVTIKDPGCTRKTFPDYFEVL+RFT
Sbjct: 481  TYDDHRMAMAFSLAACGDVPVTIKDPGCTRKTFPDYFEVLERFT 524


>ref|XP_003517039.1| PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase,
            chloroplastic-like [Glycine max]
          Length = 525

 Score =  749 bits (1935), Expect = 0.0
 Identities = 394/526 (74%), Positives = 435/526 (82%), Gaps = 11/526 (2%)
 Frame = -2

Query: 1858 SEMAQVSNMARCLQT-GNNFITDLPKSRNAKALNCIRIGSESKSLSLVFGRKAVKFNNNS 1682
            +++++V N+A+  Q  G++  ++  KS N+ +L     G+    + +    K   F  N 
Sbjct: 2    AQVSRVHNLAQSTQIFGHSSNSNKLKSVNSVSLRPRLWGASKSRIPM---HKNGSFMGNF 58

Query: 1681 TCG------FRVDASSVAAAEKPSKVPEIVLQPIKEISGVVKLPGSKSLSNRILLLAALS 1520
              G      F+V AS VAAAEKPS  PEIVL+PIK+ SG + LPGSKSLSNRILLLAALS
Sbjct: 59   NVGKGNSGVFKVSAS-VAAAEKPSTSPEIVLEPIKDFSGTITLPGSKSLSNRILLLAALS 117

Query: 1519 EGTTVLDNLLNSEDIHYMLGALKTLGLQLEVDSPNNRAVVEGCGGQFPVGKESTEEVQLF 1340
            EGTTV+DNLL SEDIHYMLGAL+TLGL++E D    +A+VEGCGG FP  KES +E+ LF
Sbjct: 118  EGTTVVDNLLYSEDIHYMLGALRTLGLRVEDDKTTKQAIVEGCGGLFPTSKESKDEINLF 177

Query: 1339 LGNAGTAMRPLTAAVIAAGGNARYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGTNCP 1160
            LGNAGTAMRPLTAAV+AAGGNA YVLDGVPRMRERPIGDLV GLKQLGADVDCFLGTNCP
Sbjct: 178  LGNAGTAMRPLTAAVVAAGGNASYVLDGVPRMRERPIGDLVAGLKQLGADVDCFLGTNCP 237

Query: 1159 PVRVNGNGGLPGGKVKLSGTISSQYLTSLLMAAPLALGDVEIEIMDKLISIPYVEMTLKL 980
            PVRVNG GGLPGGKVKLSG++SSQYLT+LLMAAPLALGDVEIEI+DKLIS+PYVEMTLKL
Sbjct: 238  PVRVNGKGGLPGGKVKLSGSVSSQYLTALLMAAPLALGDVEIEIVDKLISVPYVEMTLKL 297

Query: 979  MERFGVSVEHSDSWDHFLVQGGQKYKSPGNAFVEGDASSASYFLXXXXXXXXXXXXXXXX 800
            MERFGVSVEHS +WD FLV GGQKYKSPGNAFVEGDASSASY L                
Sbjct: 298  MERFGVSVEHSGNWDRFLVHGGQKYKSPGNAFVEGDASSASYLLAGAAITGGTITVNGCG 357

Query: 799  TSSLQGDVKFAEVLEMMGAKVTWSENSVTVTGPPRG----KRLHAVDVNMNKMPDVAMTL 632
            TSSLQGDVKFAEVLE MGAKVTWSENSVTV+GPPR     K L  +DVNMNKMPDVAMTL
Sbjct: 358  TSSLQGDVKFAEVLEKMGAKVTWSENSVTVSGPPRDFSGRKVLRGIDVNMNKMPDVAMTL 417

Query: 631  AVVALFADGPTAIRDVASWRVKETERMIAVCTELRKLGATVEEGPDYCVITPPERLNVTA 452
            AVVALFA+GPTAIRDVASWRVKETERMIA+CTELRKLGATVEEGPDYCVITPPE+LNVTA
Sbjct: 418  AVVALFANGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTA 477

Query: 451  IDTYDDHRMAMAFSLAACADVPVTIKDPGCTRKTFPDYFEVLQRFT 314
            IDTYDDHRMAMAFSLAAC DVPVTIKDPGCTRKTFPDYFEVL+R T
Sbjct: 478  IDTYDDHRMAMAFSLAACGDVPVTIKDPGCTRKTFPDYFEVLERLT 523


Top