BLASTX nr result

ID: Coptis24_contig00005842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005842
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC24177.1| unknown [Rehmannia glutinosa]                           85   6e-30
ref|XP_004152455.1| PREDICTED: uncharacterized protein LOC101218...    87   2e-28
ref|XP_002283743.1| PREDICTED: uncharacterized protein LOC100263...    85   4e-28
emb|CBI15096.3| unnamed protein product [Vitis vinifera]               85   2e-27
gb|ADB08699.1| B12D-like protein [Wolffia arrhiza] gi|338173919|...    84   3e-27

>gb|AGC24177.1| unknown [Rehmannia glutinosa]
          Length = 93

 Score = 84.7 bits (208), Expect(2) = 6e-30
 Identities = 39/58 (67%), Positives = 49/58 (84%), Gaps = 3/58 (5%)
 Frame = +1

Query: 292 RNMSV---FRVSKENRAAGILDNFEEGEKYKEHSLRKFVRGKSPEIMPSINGFFADPK 456
           RN+++    RV+KENRAAG+LD+F EGEKY EH+LRK+VR +SPEIMPS+N FF DPK
Sbjct: 35  RNITINPEVRVTKENRAAGVLDDFAEGEKYAEHALRKYVRNRSPEIMPSLNSFFTDPK 92



 Score = 73.2 bits (178), Expect(2) = 6e-30
 Identities = 33/43 (76%), Positives = 37/43 (86%)
 Frame = +2

Query: 110 MVSPTTVKRWLRPEAYPLFATMGLALGICGFQLIRNITGNPEV 238
           M S TT+KRWLRPE YPLFA +G+A+GICG QLIRNIT NPEV
Sbjct: 1   MASSTTLKRWLRPEVYPLFAAVGVAVGICGMQLIRNITINPEV 43


>ref|XP_004152455.1| PREDICTED: uncharacterized protein LOC101218501 [Cucumis sativus]
           gi|449487788|ref|XP_004157801.1| PREDICTED:
           uncharacterized LOC101218501 [Cucumis sativus]
          Length = 94

 Score = 86.7 bits (213), Expect(2) = 2e-28
 Identities = 40/48 (83%), Positives = 42/48 (87%)
 Frame = +1

Query: 310 RVSKENRAAGILDNFEEGEKYKEHSLRKFVRGKSPEIMPSINGFFADP 453
           RV+KENRAAG+LDNF EGEKY EH LRKFVR KSPEIMPSIN FF DP
Sbjct: 44  RVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDP 91



 Score = 65.9 bits (159), Expect(2) = 2e-28
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +2

Query: 110 MVSPTTVKRWLRPEAYPLFATMGLALGICGFQLIRNITGNPEV 238
           M   + + RWLRPE YPLFA +G+A+GICGFQLIRNI  NPEV
Sbjct: 1   MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEV 43


>ref|XP_002283743.1| PREDICTED: uncharacterized protein LOC100263922 [Vitis vinifera]
          Length = 93

 Score = 84.7 bits (208), Expect(2) = 4e-28
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +1

Query: 310 RVSKENRAAGILDNFEEGEKYKEHSLRKFVRGKSPEIMPSINGFFADPK 456
           RVSKENRAAG+L+NF EG+KY EH LRK+VR KSPEIMPSIN FF+DP+
Sbjct: 43  RVSKENRAAGVLENFTEGQKYSEHFLRKYVRNKSPEIMPSINSFFSDPE 91



 Score = 67.0 bits (162), Expect(2) = 4e-28
 Identities = 28/42 (66%), Positives = 36/42 (85%)
 Frame = +2

Query: 113 VSPTTVKRWLRPEAYPLFATMGLALGICGFQLIRNITGNPEV 238
           ++ +T+ RWLRPE YPLFA MG+A+GICGFQL+RNI  NP+V
Sbjct: 1   MASSTMNRWLRPEVYPLFAAMGVAVGICGFQLVRNICINPDV 42


>emb|CBI15096.3| unnamed protein product [Vitis vinifera]
          Length = 88

 Score = 84.7 bits (208), Expect(2) = 2e-27
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +1

Query: 310 RVSKENRAAGILDNFEEGEKYKEHSLRKFVRGKSPEIMPSINGFFADPK 456
           RVSKENRAAG+L+NF EG+KY EH LRK+VR KSPEIMPSIN FF+DP+
Sbjct: 38  RVSKENRAAGVLENFTEGQKYSEHFLRKYVRNKSPEIMPSINSFFSDPE 86



 Score = 64.3 bits (155), Expect(2) = 2e-27
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = +2

Query: 128 VKRWLRPEAYPLFATMGLALGICGFQLIRNITGNPEV 238
           + RWLRPE YPLFA MG+A+GICGFQL+RNI  NP+V
Sbjct: 1   MNRWLRPEVYPLFAAMGVAVGICGFQLVRNICINPDV 37


>gb|ADB08699.1| B12D-like protein [Wolffia arrhiza] gi|338173919|gb|AEI83500.1|
           B12D [Wolffia arrhiza] gi|351066151|gb|AEQ39050.1|
           putative B12D-like protein [Wolffia arrhiza]
          Length = 91

 Score = 84.3 bits (207), Expect(2) = 3e-27
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +1

Query: 310 RVSKENRAAGILDNFEEGEKYKEHSLRKFVRGKSPEIMPSINGFFADPK 456
           RVSKE RA+G+L+NF EGE+Y EHSLRKF+R K PEIMPSINGFFA+PK
Sbjct: 43  RVSKEGRASGVLENFAEGERYAEHSLRKFLRNKRPEIMPSINGFFANPK 91



 Score = 64.3 bits (155), Expect(2) = 3e-27
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = +2

Query: 113 VSPTTVKRWLRPEAYPLFATMGLALGICGFQLIRNITGNPEV 238
           ++ + V RW+RPE YPLFA +G+A+GICGFQL+RN+  NPEV
Sbjct: 1   MASSAVNRWVRPEVYPLFAAVGVAVGICGFQLVRNVCINPEV 42


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