BLASTX nr result

ID: Coptis24_contig00005824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005824
         (1477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266816.1| PREDICTED: ABC transporter I family member 1...   368   3e-99
ref|XP_002325227.1| predicted protein [Populus trichocarpa] gi|2...   367   6e-99
emb|CAN70271.1| hypothetical protein VITISV_010974 [Vitis vinifera]   363   6e-98
ref|XP_002888648.1| ATNAP3 [Arabidopsis lyrata subsp. lyrata] gi...   363   8e-98
ref|XP_002522043.1| phosphate abc transporter, putative [Ricinus...   362   1e-97

>ref|XP_002266816.1| PREDICTED: ABC transporter I family member 17 [Vitis vinifera]
            gi|297735429|emb|CBI17869.3| unnamed protein product
            [Vitis vinifera]
          Length = 268

 Score =  368 bits (944), Expect = 3e-99
 Identities = 197/270 (72%), Positives = 222/270 (82%), Gaps = 3/270 (1%)
 Frame = -1

Query: 1345 SLTTMGTNSDSLQDHLIVAVEELDP---KLKFRVRDLKKVSDAGVTILRGVSVDIPKGMI 1175
            S TT   +S    + LI+ VEE +    K KFRVR+L KVS++G  ILRG+ VD+PKG I
Sbjct: 3    SATTPFLDSSPAVEPLILQVEEEEDGERKPKFRVRNLIKVSESGEAILRGIDVDVPKGAI 62

Query: 1174 VGVIGPSGSGKSTLLRALNRLWEPPLDTVFFDGKDICDLDVLNLRRKVGMLFQLPVLFEG 995
            VGVIGPSGSGKSTLLR LNRLWEPP  TV+ DG DI +LDVL LRRKVGMLFQLPVLFEG
Sbjct: 63   VGVIGPSGSGKSTLLRVLNRLWEPPSGTVYLDGTDIRELDVLGLRRKVGMLFQLPVLFEG 122

Query: 994  TVADNIRYGPQLRGEKVPDIEVSRLLTLVDLDSSFTTKNGNELSVGQAQRVALARTLAND 815
            TVADNIRYGPQLRG+K+ D EV +LLTL DLDSSF  K G ELSVGQAQRVALARTLAN+
Sbjct: 123  TVADNIRYGPQLRGKKLTDNEVLKLLTLADLDSSFMKKTGGELSVGQAQRVALARTLANE 182

Query: 814  PEVLRIVLLLDEPTSALDPISTQNIEDAIVKLKKKNDLTTIIVSHSVKQIQRIADIVCLL 635
            PE    VLLLDEPTSALDPISTQNIED IVKLKK   +T ++VSHS+KQIQRIAD VCLL
Sbjct: 183  PE----VLLLDEPTSALDPISTQNIEDVIVKLKKSRGMTVVMVSHSIKQIQRIADRVCLL 238

Query: 634  VDGEIVEVLKPEHLSEAKHPMAQRFIELSS 545
            VDGEI+EVL+P+ LSEA+HPMA RF++LSS
Sbjct: 239  VDGEIIEVLEPDKLSEARHPMALRFLQLSS 268


>ref|XP_002325227.1| predicted protein [Populus trichocarpa] gi|222866661|gb|EEF03792.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  367 bits (941), Expect = 6e-99
 Identities = 187/240 (77%), Positives = 211/240 (87%)
 Frame = -1

Query: 1264 KFRVRDLKKVSDAGVTILRGVSVDIPKGMIVGVIGPSGSGKSTLLRALNRLWEPPLDTVF 1085
            KFR+R+L KVSDAGV IL G+++DIPKGMIVG+IGPSGSGKST+LRALNRLWEPP  TVF
Sbjct: 37   KFRIRNLTKVSDAGVPILNGINMDIPKGMIVGIIGPSGSGKSTVLRALNRLWEPPSGTVF 96

Query: 1084 FDGKDICDLDVLNLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGEKVPDIEVSRLLTLVD 905
             DG D+ DLDVL  RRKVGMLFQLP LF+GTVADNIRYGPQL+G+K+ D EV +LL+L D
Sbjct: 97   LDGHDVKDLDVLGHRRKVGMLFQLPALFDGTVADNIRYGPQLKGKKLTDDEVYKLLSLAD 156

Query: 904  LDSSFTTKNGNELSVGQAQRVALARTLANDPEVLRIVLLLDEPTSALDPISTQNIEDAIV 725
            LDSSF  K  NELSVGQAQRVALARTLAN+PE    VLLLDEPTSALDPISTQNIED +V
Sbjct: 157  LDSSFYKKTSNELSVGQAQRVALARTLANEPE----VLLLDEPTSALDPISTQNIEDVLV 212

Query: 724  KLKKKNDLTTIIVSHSVKQIQRIADIVCLLVDGEIVEVLKPEHLSEAKHPMAQRFIELSS 545
            KLKK+  LT +IVSHS+KQIQRIAD+VCLLV+GEIVEVLKP+ LSEAKHPMAQRF++L S
Sbjct: 213  KLKKQQGLTVVIVSHSIKQIQRIADVVCLLVNGEIVEVLKPDDLSEAKHPMAQRFLQLGS 272


>emb|CAN70271.1| hypothetical protein VITISV_010974 [Vitis vinifera]
          Length = 251

 Score =  363 bits (932), Expect = 6e-98
 Identities = 190/253 (75%), Positives = 213/253 (84%)
 Frame = -1

Query: 1303 HLIVAVEELDPKLKFRVRDLKKVSDAGVTILRGVSVDIPKGMIVGVIGPSGSGKSTLLRA 1124
            H +   E+ + K KFRVR+L KVS++G  ILRG+ VD+PKG IVGVIGPSGSGKSTLLR 
Sbjct: 3    HHVEEEEDGERKPKFRVRNLIKVSESGEAILRGIDVDVPKGAIVGVIGPSGSGKSTLLRV 62

Query: 1123 LNRLWEPPLDTVFFDGKDICDLDVLNLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGEKV 944
            LNRLWEPP  TV+ DG DI +LDVL LRRKVGMLFQLPVLFEGTVADNIRYGPQLRG+K+
Sbjct: 63   LNRLWEPPSGTVYLDGTDIRELDVLGLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGKKL 122

Query: 943  PDIEVSRLLTLVDLDSSFTTKNGNELSVGQAQRVALARTLANDPEVLRIVLLLDEPTSAL 764
             D EV +LLTL DLDSSF  K G ELSVGQAQRVALARTLAN+PE    VLLLDEPTSAL
Sbjct: 123  TDNEVLKLLTLADLDSSFMKKTGGELSVGQAQRVALARTLANEPE----VLLLDEPTSAL 178

Query: 763  DPISTQNIEDAIVKLKKKNDLTTIIVSHSVKQIQRIADIVCLLVDGEIVEVLKPEHLSEA 584
            DPISTQNIED IVKLKK   +T ++VSHS+KQIQRIAD VCLLVDGEI EVL+P+ LSEA
Sbjct: 179  DPISTQNIEDVIVKLKKSRGMTIVMVSHSIKQIQRIADRVCLLVDGEITEVLEPDKLSEA 238

Query: 583  KHPMAQRFIELSS 545
            +HPMA RF++LSS
Sbjct: 239  RHPMALRFLQLSS 251


>ref|XP_002888648.1| ATNAP3 [Arabidopsis lyrata subsp. lyrata] gi|297334489|gb|EFH64907.1|
            ATNAP3 [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score =  363 bits (931), Expect = 8e-98
 Identities = 188/260 (72%), Positives = 220/260 (84%), Gaps = 1/260 (0%)
 Frame = -1

Query: 1321 SDSLQDHLI-VAVEELDPKLKFRVRDLKKVSDAGVTILRGVSVDIPKGMIVGVIGPSGSG 1145
            SD L++HL+ V V   +PK+  RV DL +V+D G  IL+GV+VDIPKG+IVGVIGPSGSG
Sbjct: 9    SDGLREHLVDVGVSGSEPKI--RVHDLTRVADDGSRILKGVTVDIPKGLIVGVIGPSGSG 66

Query: 1144 KSTLLRALNRLWEPPLDTVFFDGKDICDLDVLNLRRKVGMLFQLPVLFEGTVADNIRYGP 965
            KST LR+LNRLWEPP  TVF DG+DI  +DV+ LRR+VGMLFQLPVLF+GTVADN+RYGP
Sbjct: 67   KSTFLRSLNRLWEPPESTVFLDGEDITKVDVIALRRRVGMLFQLPVLFQGTVADNVRYGP 126

Query: 964  QLRGEKVPDIEVSRLLTLVDLDSSFTTKNGNELSVGQAQRVALARTLANDPEVLRIVLLL 785
             LRGEK+ D EV +LL+L DLD+SF  K G ELSVGQAQRVALARTLAN+PE    VLLL
Sbjct: 127  NLRGEKLSDEEVYKLLSLADLDASFAKKTGAELSVGQAQRVALARTLANEPE----VLLL 182

Query: 784  DEPTSALDPISTQNIEDAIVKLKKKNDLTTIIVSHSVKQIQRIADIVCLLVDGEIVEVLK 605
            DEPTSALDPIST+NIED IVKLKK+  +TT+IVSHS+KQIQ++ADIVCL+VDGEIVEVLK
Sbjct: 183  DEPTSALDPISTENIEDVIVKLKKQRGITTVIVSHSIKQIQKVADIVCLIVDGEIVEVLK 242

Query: 604  PEHLSEAKHPMAQRFIELSS 545
            P  LS A HPMAQRF++LSS
Sbjct: 243  PSELSHATHPMAQRFLQLSS 262


>ref|XP_002522043.1| phosphate abc transporter, putative [Ricinus communis]
            gi|223538642|gb|EEF40243.1| phosphate abc transporter,
            putative [Ricinus communis]
          Length = 276

 Score =  362 bits (929), Expect = 1e-97
 Identities = 186/273 (68%), Positives = 222/273 (81%), Gaps = 6/273 (2%)
 Frame = -1

Query: 1345 SLTTMGTNSDSLQDHLIV------AVEELDPKLKFRVRDLKKVSDAGVTILRGVSVDIPK 1184
            SL+ +   +D   +HL+       A +  D + KFR+R+L + +D G  IL GV++D+PK
Sbjct: 8    SLSRVSAANDGTLEHLLTVTDIESATDNDDNQYKFRIRNLTRETDGGAKILNGVNLDVPK 67

Query: 1183 GMIVGVIGPSGSGKSTLLRALNRLWEPPLDTVFFDGKDICDLDVLNLRRKVGMLFQLPVL 1004
            G+IVG++GPSGSGKST LR+LNRLWEPP  TVF DG DI DLDVL+LRRKVGMLFQ+PVL
Sbjct: 68   GVIVGIVGPSGSGKSTFLRSLNRLWEPPPGTVFLDGCDIRDLDVLSLRRKVGMLFQIPVL 127

Query: 1003 FEGTVADNIRYGPQLRGEKVPDIEVSRLLTLVDLDSSFTTKNGNELSVGQAQRVALARTL 824
            FEGT+ADNIRYGPQLRG+K+ D EV +LL L DLDSSF  KN  ELSVGQAQRVALARTL
Sbjct: 128  FEGTIADNIRYGPQLRGKKLSDNEVHKLLILADLDSSFHKKNYGELSVGQAQRVALARTL 187

Query: 823  ANDPEVLRIVLLLDEPTSALDPISTQNIEDAIVKLKKKNDLTTIIVSHSVKQIQRIADIV 644
            AN+PE    VLLLDEPTSALDPISTQNIE+ IVKLKK   +T ++VSHS+KQIQR+AD+V
Sbjct: 188  ANEPE----VLLLDEPTSALDPISTQNIEEVIVKLKKNQGMTIVMVSHSIKQIQRVADVV 243

Query: 643  CLLVDGEIVEVLKPEHLSEAKHPMAQRFIELSS 545
            CLLV+GE+VEVLKP  LSEAKHPMAQRF++LSS
Sbjct: 244  CLLVNGEVVEVLKPNELSEAKHPMAQRFLQLSS 276


Top