BLASTX nr result

ID: Coptis24_contig00005819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005819
         (1331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281762.2| PREDICTED: uncharacterized protein LOC100257...   250   7e-64
ref|XP_003631224.1| PREDICTED: uncharacterized protein LOC100257...   250   7e-64
emb|CBI27058.3| unnamed protein product [Vitis vinifera]              246   1e-62
ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|2...   241   2e-61
emb|CBY88799.1| myb transcription factor [Humulus lupulus]            226   1e-56

>ref|XP_002281762.2| PREDICTED: uncharacterized protein LOC100257723 isoform 1 [Vitis
            vinifera]
          Length = 369

 Score =  250 bits (638), Expect = 7e-64
 Identities = 153/344 (44%), Positives = 199/344 (57%), Gaps = 27/344 (7%)
 Frame = -1

Query: 1145 IDFIEKMKNTTRCEEYMEKLEVERQKIQVFNRELPLCLQLVNQAINICKSQVGM------ 984
            +DF +KM+   RC +Y+E LE ER+KIQVF RELPLCL+LV+QAI  C+ Q+        
Sbjct: 8    MDFSDKMQ---RCHDYIEALEEERRKIQVFQRELPLCLELVSQAIESCRQQMSGTTQEYF 64

Query: 983  --KSEGEDSEFRETPVLEEFFPVN---------QSLVPSVESELSNEMREKKVDWSKSAQ 837
              +SE  +    + PVLEEF P+          QS  P+   + +N+   KK DW +S Q
Sbjct: 65   HGQSECSEQTSSDGPVLEEFIPIKKTSDDEDEQQSHQPNDNKDKNNDKSGKKSDWLRSVQ 124

Query: 836  LWNQEFTNQKDQPSQRTIVT-ESEERGGAFHPFHREKG------PRXXXXXXXXXXXXXX 678
            LWNQ       + + + I + E ++ GGAFHPF R+K                       
Sbjct: 125  LWNQTPDPPVKEDTPKKIPSMEVKKNGGAFHPFKRDKAVGTNPTSAPSAATSSTAETATG 184

Query: 677  XXTGSEGDQRQGESHKKVRRSWSNELHRKFLNALQQLGGPRVATPKQIKELMRVDGLTND 498
              +GS  ++++G+S +K RR WS ELHR+FL+ALQQLGG  VATPKQI+ELM+VDGLTND
Sbjct: 185  CSSGSRKEEKEGQSQRKARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTND 244

Query: 497  EVKSHLQKYRLHTKRAGTTVHANDNRQTPQFIVVKDLLVPAQERTEERPAT--GEAAQV- 327
            EVKSHLQKYRLHT+R    +  N N Q PQF+VV  + VP  E T     T  GEA  V 
Sbjct: 245  EVKSHLQKYRLHTRRPNPAIQHNGNPQAPQFVVVGGIWVPPPEYTAVAATTSSGEATGVT 304

Query: 326  VANRVYAPVAARPQLPSVACSPQQKQQQSITSPYYSEGRSSNTE 195
             AN +YAPVA+ P  PS      Q+QQ        SE R S++E
Sbjct: 305  TANGIYAPVASVP--PSHPQGSTQRQQPMKPKKSQSEERGSHSE 346


>ref|XP_003631224.1| PREDICTED: uncharacterized protein LOC100257723 isoform 2 [Vitis
            vinifera]
          Length = 362

 Score =  250 bits (638), Expect = 7e-64
 Identities = 153/344 (44%), Positives = 199/344 (57%), Gaps = 27/344 (7%)
 Frame = -1

Query: 1145 IDFIEKMKNTTRCEEYMEKLEVERQKIQVFNRELPLCLQLVNQAINICKSQVGM------ 984
            +DF +KM+   RC +Y+E LE ER+KIQVF RELPLCL+LV+QAI  C+ Q+        
Sbjct: 1    MDFSDKMQ---RCHDYIEALEEERRKIQVFQRELPLCLELVSQAIESCRQQMSGTTQEYF 57

Query: 983  --KSEGEDSEFRETPVLEEFFPVN---------QSLVPSVESELSNEMREKKVDWSKSAQ 837
              +SE  +    + PVLEEF P+          QS  P+   + +N+   KK DW +S Q
Sbjct: 58   HGQSECSEQTSSDGPVLEEFIPIKKTSDDEDEQQSHQPNDNKDKNNDKSGKKSDWLRSVQ 117

Query: 836  LWNQEFTNQKDQPSQRTIVT-ESEERGGAFHPFHREKG------PRXXXXXXXXXXXXXX 678
            LWNQ       + + + I + E ++ GGAFHPF R+K                       
Sbjct: 118  LWNQTPDPPVKEDTPKKIPSMEVKKNGGAFHPFKRDKAVGTNPTSAPSAATSSTAETATG 177

Query: 677  XXTGSEGDQRQGESHKKVRRSWSNELHRKFLNALQQLGGPRVATPKQIKELMRVDGLTND 498
              +GS  ++++G+S +K RR WS ELHR+FL+ALQQLGG  VATPKQI+ELM+VDGLTND
Sbjct: 178  CSSGSRKEEKEGQSQRKARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTND 237

Query: 497  EVKSHLQKYRLHTKRAGTTVHANDNRQTPQFIVVKDLLVPAQERTEERPAT--GEAAQV- 327
            EVKSHLQKYRLHT+R    +  N N Q PQF+VV  + VP  E T     T  GEA  V 
Sbjct: 238  EVKSHLQKYRLHTRRPNPAIQHNGNPQAPQFVVVGGIWVPPPEYTAVAATTSSGEATGVT 297

Query: 326  VANRVYAPVAARPQLPSVACSPQQKQQQSITSPYYSEGRSSNTE 195
             AN +YAPVA+ P  PS      Q+QQ        SE R S++E
Sbjct: 298  TANGIYAPVASVP--PSHPQGSTQRQQPMKPKKSQSEERGSHSE 339


>emb|CBI27058.3| unnamed protein product [Vitis vinifera]
          Length = 356

 Score =  246 bits (628), Expect = 1e-62
 Identities = 149/333 (44%), Positives = 192/333 (57%), Gaps = 27/333 (8%)
 Frame = -1

Query: 1112 RCEEYMEKLEVERQKIQVFNRELPLCLQLVNQAINICKSQVGM--------KSEGEDSEF 957
            RC +Y+E LE ER+KIQVF RELPLCL+LV+QAI  C+ Q+          +SE  +   
Sbjct: 3    RCHDYIEALEEERRKIQVFQRELPLCLELVSQAIESCRQQMSGTTQEYFHGQSECSEQTS 62

Query: 956  RETPVLEEFFPVN---------QSLVPSVESELSNEMREKKVDWSKSAQLWNQEFTNQKD 804
             + PVLEEF P+          QS  P+   + +N+   KK DW +S QLWNQ       
Sbjct: 63   SDGPVLEEFIPIKKTSDDEDEQQSHQPNDNKDKNNDKSGKKSDWLRSVQLWNQTPDPPVK 122

Query: 803  QPSQRTIVT-ESEERGGAFHPFHREKG------PRXXXXXXXXXXXXXXXXTGSEGDQRQ 645
            + + + I + E ++ GGAFHPF R+K                         +GS  ++++
Sbjct: 123  EDTPKKIPSMEVKKNGGAFHPFKRDKAVGTNPTSAPSAATSSTAETATGCSSGSRKEEKE 182

Query: 644  GESHKKVRRSWSNELHRKFLNALQQLGGPRVATPKQIKELMRVDGLTNDEVKSHLQKYRL 465
            G+S +K RR WS ELHR+FL+ALQQLGG  VATPKQI+ELM+VDGLTNDEVKSHLQKYRL
Sbjct: 183  GQSQRKARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRL 242

Query: 464  HTKRAGTTVHANDNRQTPQFIVVKDLLVPAQERTEERPAT--GEAAQV-VANRVYAPVAA 294
            HT+R    +  N N Q PQF+VV  + VP  E T     T  GEA  V  AN +YAPVA+
Sbjct: 243  HTRRPNPAIQHNGNPQAPQFVVVGGIWVPPPEYTAVAATTSSGEATGVTTANGIYAPVAS 302

Query: 293  RPQLPSVACSPQQKQQQSITSPYYSEGRSSNTE 195
             P  PS      Q+QQ        SE R S++E
Sbjct: 303  VP--PSHPQGSTQRQQPMKPKKSQSEERGSHSE 333


>ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|222864997|gb|EEF02128.1|
            predicted protein [Populus trichocarpa]
          Length = 390

 Score =  241 bits (616), Expect = 2e-61
 Identities = 157/374 (41%), Positives = 199/374 (53%), Gaps = 57/374 (15%)
 Frame = -1

Query: 1145 IDFIEKMKNTTRCEEYMEKLEVERQKIQVFNRELPLCLQLVNQAINICKSQV-------G 987
            +DF EKM+   RC EY+E LE ER+KIQVF RELPLCL+LV QAI  CK ++        
Sbjct: 1    MDFAEKMQ---RCHEYVEALEEERRKIQVFERELPLCLELVTQAIEACKRELSGTTEDHN 57

Query: 986  MKSEGEDSE--FRETPVLEEFFPV--------------------------NQSLVPSVES 891
            M  + E SE    E PVLEEF P+                          N +      S
Sbjct: 58   MHGQSECSEQTSSEGPVLEEFIPIKRTHSSDDEENDNNHDDDDHQEQQSQNDNKRNKSNS 117

Query: 890  ELSNEMREKKVDWSKSAQLWNQE-FTNQKDQPSQRTIVTESEER--GGAFHPFHREKG-- 726
             +SN   +KK DW +S QLWNQ     QK    ++  VTE +    GGAF PFHREK   
Sbjct: 118  SISNNDHKKKSDWLRSVQLWNQSPDPPQKQDLPRKAAVTEVKRNGAGGAFQPFHREKSVG 177

Query: 725  --------------PRXXXXXXXXXXXXXXXXTGSEGDQRQGESHKKVRRSWSNELHRKF 588
                          P                  G++ + ++  + +K RR WS ELHR+F
Sbjct: 178  KSSNQAISKAPPSVPASATSSIAGAVTGGTGGGGNKKEDKEKGNQRKQRRCWSPELHRRF 237

Query: 587  LNALQQLGGPRVATPKQIKELMRVDGLTNDEVKSHLQKYRLHTKRAGTTVHANDNRQTPQ 408
            L++LQQLGG   ATPKQI+ELM+VDGLTNDEVKSHLQKYRLHT+R   T+H N ++Q PQ
Sbjct: 238  LHSLQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPTIHTNSSQQAPQ 297

Query: 407  FIVVKDLLVPAQERTEERPAT--GEAAQV-VANRVYAPVAARPQLPSVACSPQQKQQQSI 237
            F+VV  + VP  E       T  GE + +  AN +YAP+AA P  P+V  + Q KQ +  
Sbjct: 298  FVVVGGIWVPPTEYAAVAATTTAGETSTISAANGIYAPIAAPP--PAVPQNRQHKQSEH- 354

Query: 236  TSPYYSEGRSSNTE 195
                 SEGR S+ E
Sbjct: 355  ---SQSEGRGSHGE 365


>emb|CBY88799.1| myb transcription factor [Humulus lupulus]
          Length = 378

 Score =  226 bits (576), Expect = 1e-56
 Identities = 141/351 (40%), Positives = 184/351 (52%), Gaps = 37/351 (10%)
 Frame = -1

Query: 1106 EEYMEKLEVERQKIQVFNRELPLCLQLVNQAINICKSQV----------GMKSEGEDSEF 957
            E+Y+E LEVER+KIQVF RELPLCL+LVNQ I+ CK Q+          G     E +  
Sbjct: 9    EKYIEALEVERKKIQVFQRELPLCLELVNQTIDRCKQQLSGTTTTEYVHGQSECSEQTSS 68

Query: 956  RETPVLEEFFPVNQSLVPSVESELSNEMR-----------EKKVDWSKSAQLWN---QEF 819
                V EEF P+ +S     + E   E +           +KK DW +S QLWN      
Sbjct: 69   EGHHVFEEFMPLKRSSSSDNDEEEEKEEQSPKRQTTEKDNKKKSDWLRSVQLWNTTPDPV 128

Query: 818  TNQKDQPSQRTIVTESEERGGAFHPFHREKG---PRXXXXXXXXXXXXXXXXTGSEGD-- 654
            ++QK++  ++  VTE +  GGAF PF REK    P                 T S  D  
Sbjct: 129  SSQKEELPKKASVTEVKSNGGAFQPFQREKNVGKPNGTSSSACTTPVASAPATSSNADGG 188

Query: 653  ------QRQGESHKKVRRSWSNELHRKFLNALQQLGGPRVATPKQIKELMRVDGLTNDEV 492
                   + G++ +K RR+WS ELH++FLNALQQLGG   ATPKQI+ELM+VDGLTNDEV
Sbjct: 189  SNKREEDKDGQNQRKQRRNWSPELHKRFLNALQQLGGSHAATPKQIRELMKVDGLTNDEV 248

Query: 491  KSHLQKYRLHTKRAGTTVHANDNRQTPQFIVVKDLLVPAQERTEERPATGEAAQVVA-NR 315
            KSHLQKYRLHT+R    +H N N QTPQ + V  + +   E       + ++    A N 
Sbjct: 249  KSHLQKYRLHTRRPNPAIHNNGNAQTPQVVFVGGIWMQPSEYAATVGGSSDSPNGAATNG 308

Query: 314  VYAPVAARPQLP-SVACSPQQKQQQSITSPYYSEGRSSNTEHCKEDEDTNS 165
            VYAPVAA PQ    VA   QQ Q +  +   ++        H   +   +S
Sbjct: 309  VYAPVAAPPQAAHHVAVHRQQMQNKHSSEHSHNNSEERRMSHSHSEGGVHS 359


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