BLASTX nr result

ID: Coptis24_contig00005815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005815
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|2...   204   6e-51
ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus...   204   8e-51
emb|CBI19327.3| unnamed protein product [Vitis vinifera]              202   2e-50
ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion pro...   202   2e-50
ref|XP_003527862.1| PREDICTED: multidrug and toxin extrusion pro...   200   9e-50

>ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|222842827|gb|EEE80374.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score =  204 bits (519), Expect = 6e-51
 Identities = 96/110 (87%), Positives = 104/110 (94%)
 Frame = -1

Query: 330 AVPTCLSVCLEWWWYEFMIILCGLLANPKATISSMGILIQTTSLVYVFPSSLSFGVSTRV 151
           AVPTC+SVCLEWWWYEFMI+LCGLL NPKAT++SMGILIQTTSLVYVFPSSLS GVSTRV
Sbjct: 254 AVPTCVSVCLEWWWYEFMIMLCGLLINPKATVASMGILIQTTSLVYVFPSSLSLGVSTRV 313

Query: 150 GNELGANRPAKARISMIVSLACAVALGIVAMLFATLMRHEWGRLFTSDTE 1
           GNELGANRPAKARISMIVSL CAVALG++AMLF TLMRH+WGR FT+D E
Sbjct: 314 GNELGANRPAKARISMIVSLVCAVALGLMAMLFTTLMRHQWGRFFTNDAE 363


>ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223550704|gb|EEF52190.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 528

 Score =  204 bits (518), Expect = 8e-51
 Identities = 96/110 (87%), Positives = 104/110 (94%)
 Frame = -1

Query: 330 AVPTCLSVCLEWWWYEFMIILCGLLANPKATISSMGILIQTTSLVYVFPSSLSFGVSTRV 151
           AVPTC+SVCLEWWWYEFMI+LCGLL NPKATI+SMGILIQTTSLVYVFPSSLS GVSTRV
Sbjct: 253 AVPTCVSVCLEWWWYEFMIMLCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRV 312

Query: 150 GNELGANRPAKARISMIVSLACAVALGIVAMLFATLMRHEWGRLFTSDTE 1
           GNELGANRPAKARISMIVSL+CAV LG++AMLF TLMRH+WGR FT+D E
Sbjct: 313 GNELGANRPAKARISMIVSLSCAVGLGLLAMLFTTLMRHQWGRFFTNDVE 362


>emb|CBI19327.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score =  202 bits (515), Expect = 2e-50
 Identities = 96/110 (87%), Positives = 103/110 (93%)
 Frame = -1

Query: 330 AVPTCLSVCLEWWWYEFMIILCGLLANPKATISSMGILIQTTSLVYVFPSSLSFGVSTRV 151
           AVPTC+SVCLEWWWYEFMI+LCGLLANPKATI+SMGILIQTTSLVYVFPS+LS GVSTRV
Sbjct: 254 AVPTCISVCLEWWWYEFMIMLCGLLANPKATIASMGILIQTTSLVYVFPSALSLGVSTRV 313

Query: 150 GNELGANRPAKARISMIVSLACAVALGIVAMLFATLMRHEWGRLFTSDTE 1
           GNELGANRPAKARI MIVSL CAVALG+ AMLF TLMRH+WGR FT+D E
Sbjct: 314 GNELGANRPAKARICMIVSLFCAVALGLAAMLFTTLMRHQWGRFFTNDAE 363


>ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion protein 1 [Vitis vinifera]
           gi|147802486|emb|CAN77415.1| hypothetical protein
           VITISV_000475 [Vitis vinifera]
          Length = 527

 Score =  202 bits (515), Expect = 2e-50
 Identities = 96/110 (87%), Positives = 103/110 (93%)
 Frame = -1

Query: 330 AVPTCLSVCLEWWWYEFMIILCGLLANPKATISSMGILIQTTSLVYVFPSSLSFGVSTRV 151
           AVPTC+SVCLEWWWYEFMI+LCGLLANPKATI+SMGILIQTTSLVYVFPS+LS GVSTRV
Sbjct: 254 AVPTCISVCLEWWWYEFMIMLCGLLANPKATIASMGILIQTTSLVYVFPSALSLGVSTRV 313

Query: 150 GNELGANRPAKARISMIVSLACAVALGIVAMLFATLMRHEWGRLFTSDTE 1
           GNELGANRPAKARI MIVSL CAVALG+ AMLF TLMRH+WGR FT+D E
Sbjct: 314 GNELGANRPAKARICMIVSLFCAVALGLAAMLFTTLMRHQWGRFFTNDAE 363


>ref|XP_003527862.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 548

 Score =  200 bits (509), Expect = 9e-50
 Identities = 96/110 (87%), Positives = 101/110 (91%)
 Frame = -1

Query: 330 AVPTCLSVCLEWWWYEFMIILCGLLANPKATISSMGILIQTTSLVYVFPSSLSFGVSTRV 151
           +VPTC+SVCLEWWWYE MIILCGLL NPKATI+SMGILIQTTSLVYVFPSSLS  VSTRV
Sbjct: 284 SVPTCVSVCLEWWWYELMIILCGLLLNPKATIASMGILIQTTSLVYVFPSSLSLAVSTRV 343

Query: 150 GNELGANRPAKARISMIVSLACAVALGIVAMLFATLMRHEWGRLFTSDTE 1
           GNELGANRPAKARISMIVSLACAVALG+ AMLF TLMRH WGR FTSD +
Sbjct: 344 GNELGANRPAKARISMIVSLACAVALGVTAMLFTTLMRHRWGRFFTSDQQ 393


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